EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000015200 (Gene tree)
Gene ID: 103217281
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 76112 bases
Position: chr10:55262897-55339008
Accession: 11316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000011301	RRM_1	PF00076.22	2.3e-15	1	1
ENSCSAP00000011301	RRM_3	PF08777.11	1.3e-31	1	1
ENSCSAP00000011301	La	PF05383.17	3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000013296	SSB-201	2154	-	ENSCSAP00000011301	456 (aa)	-	A0A0D9RRR2

Gene Model

Click here to download ENSCSAG00000015200's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000015200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000015200	SSB	87	89.673	ENSCSAG00000018390	-	100	89.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000015200	SSB	89	98.775	ENSG00000138385	SSB	100	100.000	Homo_sapiens
ENSCSAG00000015200	SSB	88	55.172	ENSAPOG00000003448	ssb	100	55.419	Acanthochromis_polyacanthus
ENSCSAG00000015200	SSB	89	90.714	ENSAMEG00000010507	SSB	100	90.714	Ailuropoda_melanoleuca
ENSCSAG00000015200	SSB	82	58.021	ENSACIG00000001738	ssb	97	58.021	Amphilophus_citrinellus
ENSCSAG00000015200	SSB	88	55.419	ENSAOCG00000020398	ssb	100	55.665	Amphiprion_ocellaris
ENSCSAG00000015200	SSB	88	55.911	ENSAPEG00000020395	ssb	100	56.158	Amphiprion_percula
ENSCSAG00000015200	SSB	88	57.635	ENSATEG00000016884	ssb	100	57.882	Anabas_testudineus
ENSCSAG00000015200	SSB	89	70.047	ENSAPLG00000006109	SSB	100	71.529	Anas_platyrhynchos
ENSCSAG00000015200	SSB	89	67.073	ENSACAG00000017008	SSB	99	67.073	Anolis_carolinensis
ENSCSAG00000015200	SSB	89	88.642	ENSANAG00000027195	-	100	88.642	Aotus_nancymaae
ENSCSAG00000015200	SSB	88	54.950	ENSACLG00000010798	ssb	100	54.703	Astatotilapia_calliptera
ENSCSAG00000015200	SSB	87	54.902	ENSAMXG00000012606	ssb	100	56.386	Astyanax_mexicanus
ENSCSAG00000015200	SSB	89	93.827	ENSBTAG00000008716	SSB	100	93.827	Bos_taurus
ENSCSAG00000015200	SSB	65	35.762	WBGene00016653	C44E4.4	90	33.791	Caenorhabditis_elegans
ENSCSAG00000015200	SSB	89	97.531	ENSCJAG00000045073	SSB	100	97.531	Callithrix_jacchus
ENSCSAG00000015200	SSB	89	94.581	ENSCAFG00000012418	SSB	100	94.581	Canis_familiaris
ENSCSAG00000015200	SSB	89	94.581	ENSCAFG00020002900	SSB	100	94.581	Canis_lupus_dingo
ENSCSAG00000015200	SSB	89	93.827	ENSCHIG00000022624	-	100	93.827	Capra_hircus
ENSCSAG00000015200	SSB	89	88.395	ENSCHIG00000022196	-	100	88.395	Capra_hircus
ENSCSAG00000015200	SSB	89	95.309	ENSTSYG00000000097	SSB	100	95.309	Carlito_syrichta
ENSCSAG00000015200	SSB	89	95.802	ENSCPOG00000003338	SSB	100	95.802	Cavia_porcellus
ENSCSAG00000015200	SSB	89	98.272	ENSCCAG00000035147	SSB	100	98.272	Cebus_capucinus
ENSCSAG00000015200	SSB	89	78.519	ENSCATG00000036701	SSB	100	78.519	Cercocebus_atys
ENSCSAG00000015200	SSB	89	72.840	ENSCATG00000042909	-	100	72.840	Cercocebus_atys
ENSCSAG00000015200	SSB	89	95.062	ENSCLAG00000015617	-	100	95.062	Chinchilla_lanigera
ENSCSAG00000015200	SSB	89	94.321	ENSCHOG00000007763	SSB	100	94.321	Choloepus_hoffmanni
ENSCSAG00000015200	SSB	89	78.729	ENSCPBG00000006519	SSB	100	79.951	Chrysemys_picta_bellii
ENSCSAG00000015200	SSB	89	83.210	ENSCANG00000033240	-	100	83.210	Colobus_angolensis_palliatus
ENSCSAG00000015200	SSB	89	99.506	ENSCANG00000027695	SSB	100	99.506	Colobus_angolensis_palliatus
ENSCSAG00000015200	SSB	87	76.441	ENSCANG00000028838	-	95	76.441	Colobus_angolensis_palliatus
ENSCSAG00000015200	SSB	89	79.024	ENSCGRG00001024831	Ssb	100	80.244	Cricetulus_griseus_chok1gshd
ENSCSAG00000015200	SSB	89	79.024	ENSCGRG00000005387	Ssb	100	80.244	Cricetulus_griseus_crigri
ENSCSAG00000015200	SSB	87	57.143	ENSCSEG00000011599	ssb	99	57.393	Cynoglossus_semilaevis
ENSCSAG00000015200	SSB	88	57.248	ENSCVAG00000021558	ssb	100	57.740	Cyprinodon_variegatus
ENSCSAG00000015200	SSB	87	56.824	ENSDARG00000029252	ssb	99	56.965	Danio_rerio
ENSCSAG00000015200	SSB	89	93.827	ENSDNOG00000013450	SSB	100	93.827	Dasypus_novemcinctus
ENSCSAG00000015200	SSB	89	84.915	ENSDORG00000005543	Ssb	100	84.915	Dipodomys_ordii
ENSCSAG00000015200	SSB	79	33.594	FBgn0011638	La	94	34.271	Drosophila_melanogaster
ENSCSAG00000015200	SSB	52	93.532	ENSETEG00000004614	-	61	93.532	Echinops_telfairi
ENSCSAG00000015200	SSB	86	47.959	ENSEBUG00000001237	ssb	96	48.214	Eptatretus_burgeri
ENSCSAG00000015200	SSB	89	95.802	ENSEASG00005022835	SSB	100	95.802	Equus_asinus_asinus
ENSCSAG00000015200	SSB	89	96.049	ENSECAG00000018495	SSB	100	96.049	Equus_caballus
ENSCSAG00000015200	SSB	73	89.286	ENSEEUG00000008077	SSB	86	89.286	Erinaceus_europaeus
ENSCSAG00000015200	SSB	88	59.951	ENSELUG00000020929	ssb	100	60.294	Esox_lucius
ENSCSAG00000015200	SSB	89	94.828	ENSFCAG00000011601	SSB	100	94.828	Felis_catus
ENSCSAG00000015200	SSB	89	73.659	ENSFALG00000000930	SSB	100	74.817	Ficedula_albicollis
ENSCSAG00000015200	SSB	89	95.309	ENSFDAG00000000598	SSB	100	95.309	Fukomys_damarensis
ENSCSAG00000015200	SSB	64	54.181	ENSFHEG00000003268	ssb	95	54.575	Fundulus_heteroclitus
ENSCSAG00000015200	SSB	86	54.815	ENSGMOG00000002664	ssb	99	55.556	Gadus_morhua
ENSCSAG00000015200	SSB	89	74.755	ENSGALG00000009677	SSB	100	74.755	Gallus_gallus
ENSCSAG00000015200	SSB	88	55.911	ENSGAFG00000002749	ssb	100	56.158	Gambusia_affinis
ENSCSAG00000015200	SSB	88	53.883	ENSGACG00000005107	ssb	100	54.479	Gasterosteus_aculeatus
ENSCSAG00000015200	SSB	89	77.995	ENSGAGG00000007807	SSB	100	78.729	Gopherus_agassizii
ENSCSAG00000015200	SSB	89	81.728	ENSGGOG00000024891	-	100	81.728	Gorilla_gorilla
ENSCSAG00000015200	SSB	57	95.259	ENSGGOG00000023471	-	100	95.259	Gorilla_gorilla
ENSCSAG00000015200	SSB	88	54.455	ENSHBUG00000006584	ssb	100	54.208	Haplochromis_burtoni
ENSCSAG00000015200	SSB	89	93.689	ENSHGLG00000017580	-	100	93.689	Heterocephalus_glaber_female
ENSCSAG00000015200	SSB	89	86.978	ENSHGLG00000004478	-	100	86.978	Heterocephalus_glaber_female
ENSCSAG00000015200	SSB	89	85.679	ENSHGLG00000005832	-	100	85.679	Heterocephalus_glaber_female
ENSCSAG00000015200	SSB	89	81.975	ENSHGLG00100008767	-	100	81.975	Heterocephalus_glaber_male
ENSCSAG00000015200	SSB	89	93.689	ENSHGLG00100003084	-	100	93.689	Heterocephalus_glaber_male
ENSCSAG00000015200	SSB	87	55.919	ENSHCOG00000019011	ssb	99	56.171	Hippocampus_comes
ENSCSAG00000015200	SSB	86	58.209	ENSIPUG00000003681	SSB	99	58.209	Ictalurus_punctatus
ENSCSAG00000015200	SSB	89	95.556	ENSSTOG00000008416	SSB	100	95.556	Ictidomys_tridecemlineatus
ENSCSAG00000015200	SSB	88	68.657	ENSJJAG00000016250	-	99	68.657	Jaculus_jaculus
ENSCSAG00000015200	SSB	89	80.378	ENSJJAG00000023158	-	100	80.378	Jaculus_jaculus
ENSCSAG00000015200	SSB	88	56.650	ENSKMAG00000017317	ssb	100	56.897	Kryptolebias_marmoratus
ENSCSAG00000015200	SSB	88	53.941	ENSLBEG00000017345	ssb	100	54.433	Labrus_bergylta
ENSCSAG00000015200	SSB	89	67.076	ENSLACG00000014056	SSB	99	69.853	Latimeria_chalumnae
ENSCSAG00000015200	SSB	87	66.833	ENSLOCG00000007933	ssb	99	67.082	Lepisosteus_oculatus
ENSCSAG00000015200	SSB	66	69.536	ENSLAFG00000026721	-	99	69.536	Loxodonta_africana
ENSCSAG00000015200	SSB	89	87.678	ENSLAFG00000000867	-	100	89.100	Loxodonta_africana
ENSCSAG00000015200	SSB	89	79.506	ENSLAFG00000028909	-	100	79.506	Loxodonta_africana
ENSCSAG00000015200	SSB	78	83.754	ENSMFAG00000041478	-	100	83.754	Macaca_fascicularis
ENSCSAG00000015200	SSB	89	99.753	ENSMFAG00000039066	SSB	100	99.753	Macaca_fascicularis
ENSCSAG00000015200	SSB	89	83.210	ENSMMUG00000011724	-	97	83.210	Macaca_mulatta
ENSCSAG00000015200	SSB	88	68.983	ENSMMUG00000039889	-	100	69.231	Macaca_mulatta
ENSCSAG00000015200	SSB	89	99.753	ENSMMUG00000023051	SSB	100	99.753	Macaca_mulatta
ENSCSAG00000015200	SSB	78	83.754	ENSMNEG00000034698	-	100	83.754	Macaca_nemestrina
ENSCSAG00000015200	SSB	89	87.073	ENSMNEG00000028321	SSB	100	87.073	Macaca_nemestrina
ENSCSAG00000015200	SSB	89	70.370	ENSMLEG00000042644	-	100	70.370	Mandrillus_leucophaeus
ENSCSAG00000015200	SSB	89	99.753	ENSMLEG00000035717	SSB	100	99.753	Mandrillus_leucophaeus
ENSCSAG00000015200	SSB	88	58.621	ENSMAMG00000004800	ssb	100	58.867	Mastacembelus_armatus
ENSCSAG00000015200	SSB	88	54.950	ENSMZEG00005005749	ssb	100	54.703	Maylandia_zebra
ENSCSAG00000015200	SSB	89	74.755	ENSMGAG00000010328	SSB	100	74.755	Meleagris_gallopavo
ENSCSAG00000015200	SSB	88	96.278	ENSMICG00000028252	-	99	96.278	Microcebus_murinus
ENSCSAG00000015200	SSB	87	88.665	ENSMICG00000033304	-	98	87.871	Microcebus_murinus
ENSCSAG00000015200	SSB	76	82.390	ENSMODG00000007027	-	100	82.390	Monodelphis_domestica
ENSCSAG00000015200	SSB	89	52.798	ENSMODG00000019271	-	100	67.901	Monodelphis_domestica
ENSCSAG00000015200	SSB	89	78.313	ENSMODG00000008227	-	100	79.036	Monodelphis_domestica
ENSCSAG00000015200	SSB	80	55.556	ENSMALG00000008045	ssb	90	58.621	Monopterus_albus
ENSCSAG00000015200	SSB	89	77.672	MGP_CAROLIEiJ_G0023629	-	100	90.761	Mus_caroli
ENSCSAG00000015200	SSB	89	76.960	ENSMUSG00000068882	Ssb	100	90.761	Mus_musculus
ENSCSAG00000015200	SSB	89	77.069	MGP_PahariEiJ_G0025081	-	100	90.761	Mus_pahari
ENSCSAG00000015200	SSB	89	76.960	MGP_SPRETEiJ_G0024551	Ssb	100	90.761	Mus_spretus
ENSCSAG00000015200	SSB	89	95.309	ENSMPUG00000000785	SSB	100	95.309	Mustela_putorius_furo
ENSCSAG00000015200	SSB	89	89.762	ENSMLUG00000016316	SSB	100	89.762	Myotis_lucifugus
ENSCSAG00000015200	SSB	88	55.198	ENSNBRG00000012661	ssb	100	54.950	Neolamprologus_brichardi
ENSCSAG00000015200	SSB	89	69.951	ENSNLEG00000028754	-	100	70.443	Nomascus_leucogenys
ENSCSAG00000015200	SSB	89	99.506	ENSNLEG00000004958	SSB	100	99.506	Nomascus_leucogenys
ENSCSAG00000015200	SSB	54	86.694	ENSMEUG00000001650	-	100	86.694	Notamacropus_eugenii
ENSCSAG00000015200	SSB	64	75.862	ENSOPRG00000008475	-	100	75.862	Ochotona_princeps
ENSCSAG00000015200	SSB	83	89.418	ENSODEG00000004202	-	100	89.418	Octodon_degus
ENSCSAG00000015200	SSB	88	54.455	ENSONIG00000008776	ssb	100	54.208	Oreochromis_niloticus
ENSCSAG00000015200	SSB	89	83.951	ENSOANG00000008543	SSB	100	83.951	Ornithorhynchus_anatinus
ENSCSAG00000015200	SSB	89	95.556	ENSOCUG00000010396	SSB	100	95.556	Oryctolagus_cuniculus
ENSCSAG00000015200	SSB	88	58.128	ENSORLG00000017208	ssb	100	58.374	Oryzias_latipes
ENSCSAG00000015200	SSB	88	58.374	ENSORLG00020022574	ssb	100	58.621	Oryzias_latipes_hni
ENSCSAG00000015200	SSB	88	57.882	ENSORLG00015016592	ssb	100	58.128	Oryzias_latipes_hsok
ENSCSAG00000015200	SSB	88	58.272	ENSOMEG00000003193	ssb	100	59.012	Oryzias_melastigma
ENSCSAG00000015200	SSB	89	90.284	ENSOGAG00000029768	SSB	100	90.284	Otolemur_garnettii
ENSCSAG00000015200	SSB	89	93.333	ENSOARG00000002906	SSB	100	93.333	Ovis_aries
ENSCSAG00000015200	SSB	86	77.157	ENSPPAG00000006189	-	93	82.873	Pan_paniscus
ENSCSAG00000015200	SSB	89	98.775	ENSPPAG00000042673	SSB	100	98.775	Pan_paniscus
ENSCSAG00000015200	SSB	89	80.494	ENSPPAG00000032427	-	100	86.822	Pan_paniscus
ENSCSAG00000015200	SSB	89	94.828	ENSPPRG00000006599	SSB	100	94.828	Panthera_pardus
ENSCSAG00000015200	SSB	90	94.417	ENSPTIG00000011021	SSB	99	94.417	Panthera_tigris_altaica
ENSCSAG00000015200	SSB	89	76.543	ENSPTRG00000042880	-	100	76.543	Pan_troglodytes
ENSCSAG00000015200	SSB	89	98.775	ENSPTRG00000012620	SSB	100	98.775	Pan_troglodytes
ENSCSAG00000015200	SSB	89	69.136	ENSPANG00000034126	-	100	69.630	Papio_anubis
ENSCSAG00000015200	SSB	89	99.753	ENSPANG00000007440	SSB	100	99.753	Papio_anubis
ENSCSAG00000015200	SSB	87	68.922	ENSPANG00000031877	-	95	68.922	Papio_anubis
ENSCSAG00000015200	SSB	88	61.975	ENSPKIG00000019325	ssb	99	62.716	Paramormyrops_kingsleyae
ENSCSAG00000015200	SSB	90	74.818	ENSPSIG00000002265	SSB	94	75.545	Pelodiscus_sinensis
ENSCSAG00000015200	SSB	75	55.043	ENSPMGG00000020075	ssb	91	55.331	Periophthalmus_magnuspinnatus
ENSCSAG00000015200	SSB	88	44.316	ENSPMAG00000002982	ssb	89	48.698	Petromyzon_marinus
ENSCSAG00000015200	SSB	89	82.759	ENSPCIG00000028591	-	100	83.005	Phascolarctos_cinereus
ENSCSAG00000015200	SSB	88	56.897	ENSPFOG00000009650	ssb	100	57.143	Poecilia_formosa
ENSCSAG00000015200	SSB	88	56.650	ENSPLAG00000020498	ssb	100	56.897	Poecilia_latipinna
ENSCSAG00000015200	SSB	88	56.404	ENSPMEG00000001051	ssb	100	56.650	Poecilia_mexicana
ENSCSAG00000015200	SSB	83	56.771	ENSPREG00000003708	ssb	99	57.031	Poecilia_reticulata
ENSCSAG00000015200	SSB	89	99.506	ENSPPYG00000012919	SSB	100	99.506	Pongo_abelii
ENSCSAG00000015200	SSB	84	89.556	ENSPCAG00000010276	SSB	100	89.556	Procavia_capensis
ENSCSAG00000015200	SSB	89	92.346	ENSPCOG00000015741	-	100	92.346	Propithecus_coquereli
ENSCSAG00000015200	SSB	89	85.185	ENSPCOG00000023189	-	100	85.185	Propithecus_coquereli
ENSCSAG00000015200	SSB	78	94.350	ENSPVAG00000006615	SSB	100	94.350	Pteropus_vampyrus
ENSCSAG00000015200	SSB	88	54.950	ENSPNYG00000006444	ssb	100	54.703	Pundamilia_nyererei
ENSCSAG00000015200	SSB	87	57.389	ENSPNAG00000011708	ssb	100	57.561	Pygocentrus_nattereri
ENSCSAG00000015200	SSB	89	77.941	ENSRNOG00000011606	AABR07061825.1	100	77.941	Rattus_norvegicus
ENSCSAG00000015200	SSB	89	77.435	ENSRNOG00000007998	Ssb	100	77.435	Rattus_norvegicus
ENSCSAG00000015200	SSB	83	82.058	ENSRBIG00000041232	-	98	82.058	Rhinopithecus_bieti
ENSCSAG00000015200	SSB	79	91.713	ENSRBIG00000041608	-	98	91.713	Rhinopithecus_bieti
ENSCSAG00000015200	SSB	89	82.195	ENSRBIG00000041972	SSB	88	99.130	Rhinopithecus_bieti
ENSCSAG00000015200	SSB	89	71.182	ENSRBIG00000029918	-	100	71.182	Rhinopithecus_bieti
ENSCSAG00000015200	SSB	87	90.000	ENSRROG00000034102	-	98	89.950	Rhinopithecus_roxellana
ENSCSAG00000015200	SSB	89	99.506	ENSRROG00000040346	SSB	100	99.506	Rhinopithecus_roxellana
ENSCSAG00000015200	SSB	89	80.788	ENSRROG00000007149	-	100	80.788	Rhinopithecus_roxellana
ENSCSAG00000015200	SSB	87	83.081	ENSRROG00000031684	-	100	83.081	Rhinopithecus_roxellana
ENSCSAG00000015200	SSB	89	98.765	ENSSBOG00000027204	SSB	100	98.765	Saimiri_boliviensis_boliviensis
ENSCSAG00000015200	SSB	89	82.759	ENSSHAG00000018062	SSB	100	83.005	Sarcophilus_harrisii
ENSCSAG00000015200	SSB	89	64.059	ENSSFOG00015000550	ssb	100	64.548	Scleropages_formosus
ENSCSAG00000015200	SSB	87	53.634	ENSSMAG00000013885	ssb	99	57.219	Scophthalmus_maximus
ENSCSAG00000015200	SSB	88	56.897	ENSSDUG00000020117	ssb	100	57.143	Seriola_dumerili
ENSCSAG00000015200	SSB	88	55.583	ENSSLDG00000002525	ssb	100	55.583	Seriola_lalandi_dorsalis
ENSCSAG00000015200	SSB	84	85.117	ENSSARG00000007747	SSB	100	85.117	Sorex_araneus
ENSCSAG00000015200	SSB	89	76.167	ENSSPUG00000012112	SSB	100	76.167	Sphenodon_punctatus
ENSCSAG00000015200	SSB	88	55.665	ENSSPAG00000005696	ssb	100	55.911	Stegastes_partitus
ENSCSAG00000015200	SSB	87	76.826	ENSSSCG00000015938	SSB	98	77.136	Sus_scrofa
ENSCSAG00000015200	SSB	89	74.572	ENSTGUG00000007942	SSB	100	74.572	Taeniopygia_guttata
ENSCSAG00000015200	SSB	88	56.683	ENSTRUG00000017839	ssb	100	57.284	Takifugu_rubripes
ENSCSAG00000015200	SSB	80	59.239	ENSTNIG00000000915	ssb	100	59.239	Tetraodon_nigroviridis
ENSCSAG00000015200	SSB	73	99.130	ENSTBEG00000009056	SSB	82	99.130	Tupaia_belangeri
ENSCSAG00000015200	SSB	89	94.089	ENSTTRG00000002152	SSB	100	94.089	Tursiops_truncatus
ENSCSAG00000015200	SSB	83	95.225	ENSUAMG00000027833	SSB	99	95.225	Ursus_americanus
ENSCSAG00000015200	SSB	89	94.581	ENSUMAG00000013907	SSB	100	94.581	Ursus_maritimus
ENSCSAG00000015200	SSB	89	93.827	ENSVPAG00000007183	SSB	100	93.827	Vicugna_pacos
ENSCSAG00000015200	SSB	90	94.146	ENSVVUG00000016573	SSB	78	94.146	Vulpes_vulpes
ENSCSAG00000015200	SSB	89	57.944	ENSXETG00000025402	ssb	100	59.674	Xenopus_tropicalis
ENSCSAG00000015200	SSB	83	54.569	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSCSAG00000015200	SSB	88	55.665	ENSXMAG00000004888	ssb	100	55.911	Xiphophorus_maculatus