EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000015339 (Gene tree)
Gene ID: 103244265
Gene Symbol: CHD1
Alias: -
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 75244 bases
Position: chr23:2432461-2507704
Accession: 103244265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000011431	ResIII	PF04851.15	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000013431	CHD1-201	8086	-	ENSCSAP00000011431	1712 (aa)	XP_008012236	A0A0D9RS42

Gene Model

Click here to download ENSCSAG00000015339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000015339's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000015339	CHD1	90	58.897	ENSCSAG00000017007	-	91	59.547

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000015339	CHD1	100	99.241	ENSG00000153922	CHD1	100	99.241	Homo_sapiens
ENSCSAG00000015339	CHD1	67	82.627	ENSAPOG00000005764	chd1	97	82.971	Acanthochromis_polyacanthus
ENSCSAG00000015339	CHD1	88	77.008	ENSAOCG00000023105	chd1	94	77.531	Amphiprion_ocellaris
ENSCSAG00000015339	CHD1	88	78.198	ENSAPEG00000013544	chd1	94	78.721	Amphiprion_percula
ENSCSAG00000015339	CHD1	71	82.319	ENSAMXG00000010843	chd1	91	83.502	Astyanax_mexicanus
ENSCSAG00000015339	CHD1	100	99.942	ENSCATG00000032035	CHD1	100	99.942	Cercocebus_atys
ENSCSAG00000015339	CHD1	100	97.897	ENSCANG00000036916	CHD1	100	97.897	Colobus_angolensis_palliatus
ENSCSAG00000015339	CHD1	100	95.508	ENSCGRG00001023943	Chd1	100	95.566	Cricetulus_griseus_chok1gshd
ENSCSAG00000015339	CHD1	100	95.508	ENSCGRG00000008652	Chd1	100	95.566	Cricetulus_griseus_crigri
ENSCSAG00000015339	CHD1	88	75.587	ENSCSEG00000009553	chd1	95	76.362	Cynoglossus_semilaevis
ENSCSAG00000015339	CHD1	91	89.208	ENSEASG00005016110	CHD1	99	97.711	Equus_asinus_asinus
ENSCSAG00000015339	CHD1	88	77.907	ENSELUG00000017677	chd1	93	77.921	Esox_lucius
ENSCSAG00000015339	CHD1	71	81.255	ENSFHEG00000021164	chd1	87	82.759	Fundulus_heteroclitus
ENSCSAG00000015339	CHD1	96	77.018	ENSGMOG00000001537	chd1	96	67.011	Gadus_morhua
ENSCSAG00000015339	CHD1	91	89.547	ENSGALG00000031327	-	96	89.739	Gallus_gallus
ENSCSAG00000015339	CHD1	82	81.694	ENSGAFG00000019880	chd1	92	82.844	Gambusia_affinis
ENSCSAG00000015339	CHD1	99	95.701	ENSGGOG00000011463	CHD1	99	95.701	Gorilla_gorilla
ENSCSAG00000015339	CHD1	87	79.178	ENSHCOG00000014222	chd1	91	79.611	Hippocampus_comes
ENSCSAG00000015339	CHD1	86	81.715	ENSIPUG00000001369	chd1	95	79.610	Ictalurus_punctatus
ENSCSAG00000015339	CHD1	63	94.977	ENSLAFG00000023183	CHD1	99	94.977	Loxodonta_africana
ENSCSAG00000015339	CHD1	100	99.942	ENSMFAG00000031226	CHD1	100	99.942	Macaca_fascicularis
ENSCSAG00000015339	CHD1	83	99.648	ENSMMUG00000014090	CHD1	99	99.648	Macaca_mulatta
ENSCSAG00000015339	CHD1	100	99.883	ENSMNEG00000045073	CHD1	100	99.883	Macaca_nemestrina
ENSCSAG00000015339	CHD1	99	95.634	ENSMLEG00000041096	CHD1	99	96.047	Mandrillus_leucophaeus
ENSCSAG00000015339	CHD1	72	80.403	ENSMZEG00005010957	chd1	94	80.287	Maylandia_zebra
ENSCSAG00000015339	CHD1	100	92.940	ENSMOCG00000019121	Chd1	100	93.057	Microtus_ochrogaster
ENSCSAG00000015339	CHD1	79	78.561	ENSMALG00000013317	chd1	95	77.974	Monopterus_albus
ENSCSAG00000015339	CHD1	100	94.169	MGP_CAROLIEiJ_G0021099	Chd1	99	96.950	Mus_caroli
ENSCSAG00000015339	CHD1	100	94.519	ENSMUSG00000023852	Chd1	99	97.135	Mus_musculus
ENSCSAG00000015339	CHD1	100	93.703	MGP_PahariEiJ_G0023414	Chd1	99	97.138	Mus_pahari
ENSCSAG00000015339	CHD1	88	76.010	ENSNBRG00000006860	chd1	91	77.807	Neolamprologus_brichardi
ENSCSAG00000015339	CHD1	99	96.370	ENSNLEG00000014493	CHD1	99	96.370	Nomascus_leucogenys
ENSCSAG00000015339	CHD1	100	92.575	ENSOANG00000004891	CHD1	100	94.229	Ornithorhynchus_anatinus
ENSCSAG00000015339	CHD1	59	76.447	ENSORLG00015016725	chd1	93	77.168	Oryzias_latipes_hsok
ENSCSAG00000015339	CHD1	99	97.767	ENSPPAG00000043367	CHD1	99	97.767	Pan_paniscus
ENSCSAG00000015339	CHD1	100	99.182	ENSPTRG00000017103	CHD1	100	99.182	Pan_troglodytes
ENSCSAG00000015339	CHD1	100	99.942	ENSPANG00000006387	CHD1	100	99.942	Papio_anubis
ENSCSAG00000015339	CHD1	90	78.384	ENSPKIG00000024719	chd1	94	78.975	Paramormyrops_kingsleyae
ENSCSAG00000015339	CHD1	73	81.315	ENSPMGG00000005785	chd1	93	81.395	Periophthalmus_magnuspinnatus
ENSCSAG00000015339	CHD1	100	95.683	ENSPEMG00000015939	Chd1	100	95.683	Peromyscus_maniculatus_bairdii
ENSCSAG00000015339	CHD1	50	76.588	ENSPLAG00000006473	-	85	77.962	Poecilia_latipinna
ENSCSAG00000015339	CHD1	96	74.176	ENSPREG00000004209	chd1	97	74.669	Poecilia_reticulata
ENSCSAG00000015339	CHD1	83	95.778	ENSRNOG00000014434	Chd1	99	95.848	Rattus_norvegicus
ENSCSAG00000015339	CHD1	100	96.673	ENSRBIG00000044325	CHD1	100	96.906	Rhinopithecus_bieti
ENSCSAG00000015339	CHD1	100	99.591	ENSRROG00000001726	CHD1	100	99.591	Rhinopithecus_roxellana
ENSCSAG00000015339	CHD1	71	81.930	ENSSFOG00015007161	chd1	90	82.602	Scleropages_formosus
ENSCSAG00000015339	CHD1	79	78.661	ENSSDUG00000018314	chd1	94	78.514	Seriola_dumerili
ENSCSAG00000015339	CHD1	51	83.713	ENSSLDG00000017244	chd1	84	86.019	Seriola_lalandi_dorsalis
ENSCSAG00000015339	CHD1	79	79.381	ENSSPAG00000007024	chd1	95	78.571	Stegastes_partitus
ENSCSAG00000015339	CHD1	86	97.973	ENSSSCG00000014177	CHD1	100	97.973	Sus_scrofa
ENSCSAG00000015339	CHD1	90	75.290	ENSTRUG00000010282	chd1	90	75.804	Takifugu_rubripes
ENSCSAG00000015339	CHD1	72	77.317	ENSTNIG00000007101	chd1	95	78.240	Tetraodon_nigroviridis
ENSCSAG00000015339	CHD1	96	72.755	ENSXCOG00000017184	chd1	97	71.731	Xiphophorus_couchianus
ENSCSAG00000015339	CHD1	77	77.769	ENSXMAG00000014538	chd1	95	78.653	Xiphophorus_maculatus