EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000015503 (Gene tree)
Gene ID: 103243736
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 15896 bases
Position: chr2:6711458-6727353
Accession: 103243736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000011581	RRM_1	PF00076.22	2.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000013586	RBM38-201	714	-	ENSCSAP00000011581	237 (aa)	XP_008011477	A0A0D9RSJ2

Gene Model

Click here to download ENSCSAG00000015503's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000015503's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000015503	RBM38	63	79.085	ENSCSAG00000007599	RBM24	100	67.227
ENSCSAG00000015503	RBM38	57	36.842	ENSCSAG00000002265	MSI1	81	36.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000015503	RBM38	100	98.745	ENSG00000132819	RBM38	100	99.174	Homo_sapiens
ENSCSAG00000015503	RBM38	90	68.950	ENSAPOG00000009939	-	94	69.091	Acanthochromis_polyacanthus
ENSCSAG00000015503	RBM38	89	59.483	ENSAPOG00000003301	rbm38	91	59.483	Acanthochromis_polyacanthus
ENSCSAG00000015503	RBM38	89	57.940	ENSACIG00000000010	rbm38	91	57.940	Amphilophus_citrinellus
ENSCSAG00000015503	RBM38	89	69.585	ENSACIG00000012502	-	100	88.889	Amphilophus_citrinellus
ENSCSAG00000015503	RBM38	89	59.483	ENSAOCG00000013497	-	91	59.483	Amphiprion_ocellaris
ENSCSAG00000015503	RBM38	99	64.730	ENSAOCG00000012559	RBM38	99	65.289	Amphiprion_ocellaris
ENSCSAG00000015503	RBM38	99	60.331	ENSAPEG00000013137	rbm38	99	60.331	Amphiprion_percula
ENSCSAG00000015503	RBM38	90	63.559	ENSAPEG00000023581	-	95	65.401	Amphiprion_percula
ENSCSAG00000015503	RBM38	90	61.607	ENSATEG00000016366	rbm38	94	61.607	Anabas_testudineus
ENSCSAG00000015503	RBM38	89	65.236	ENSATEG00000016710	-	92	66.379	Anabas_testudineus
ENSCSAG00000015503	RBM38	91	77.727	ENSACAG00000016238	RBM38	97	74.153	Anolis_carolinensis
ENSCSAG00000015503	RBM38	90	97.685	ENSANAG00000031959	RBM38	100	100.000	Aotus_nancymaae
ENSCSAG00000015503	RBM38	89	66.667	ENSACLG00000019514	-	92	66.810	Astatotilapia_calliptera
ENSCSAG00000015503	RBM38	91	66.234	ENSAMXG00000015601	-	95	67.391	Astyanax_mexicanus
ENSCSAG00000015503	RBM38	83	60.914	ENSAMXG00000038120	rbm38	81	61.421	Astyanax_mexicanus
ENSCSAG00000015503	RBM38	100	95.816	ENSBTAG00000008105	RBM38	100	95.816	Bos_taurus
ENSCSAG00000015503	RBM38	84	50.500	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSCSAG00000015503	RBM38	100	97.908	ENSCJAG00000019139	RBM38	100	100.000	Callithrix_jacchus
ENSCSAG00000015503	RBM38	100	95.397	ENSCAFG00020021943	RBM38	100	95.397	Canis_lupus_dingo
ENSCSAG00000015503	RBM38	100	94.561	ENSCHIG00000002609	RBM38	100	94.561	Capra_hircus
ENSCSAG00000015503	RBM38	100	95.816	ENSCPOG00000012781	RBM38	100	95.816	Cavia_porcellus
ENSCSAG00000015503	RBM38	100	97.908	ENSCCAG00000036872	RBM38	100	100.000	Cebus_capucinus
ENSCSAG00000015503	RBM38	100	100.000	ENSCATG00000032133	RBM38	100	100.000	Cercocebus_atys
ENSCSAG00000015503	RBM38	96	95.652	ENSCLAG00000005906	RBM38	100	95.652	Chinchilla_lanigera
ENSCSAG00000015503	RBM38	90	81.193	ENSCPBG00000024059	RBM38	100	81.193	Chrysemys_picta_bellii
ENSCSAG00000015503	RBM38	64	62.658	ENSCSAVG00000001132	-	76	56.098	Ciona_savignyi
ENSCSAG00000015503	RBM38	99	77.119	ENSCANG00000030105	-	89	77.119	Colobus_angolensis_palliatus
ENSCSAG00000015503	RBM38	100	92.050	ENSCGRG00001012928	Rbm38	100	92.050	Cricetulus_griseus_chok1gshd
ENSCSAG00000015503	RBM38	62	68.667	ENSCSEG00000020943	rbm38	60	61.957	Cynoglossus_semilaevis
ENSCSAG00000015503	RBM38	89	70.370	ENSCSEG00000004701	-	93	70.968	Cynoglossus_semilaevis
ENSCSAG00000015503	RBM38	76	76.374	ENSCVAG00000005472	-	92	66.379	Cyprinodon_variegatus
ENSCSAG00000015503	RBM38	88	58.190	ENSCVAG00000015952	rbm38	91	59.227	Cyprinodon_variegatus
ENSCSAG00000015503	RBM38	88	64.126	ENSDARG00000058818	rbm38	92	64.126	Danio_rerio
ENSCSAG00000015503	RBM38	90	90.654	ENSDNOG00000032004	RBM38	100	90.654	Dasypus_novemcinctus
ENSCSAG00000015503	RBM38	100	95.397	ENSECAG00000007700	RBM38	100	95.397	Equus_caballus
ENSCSAG00000015503	RBM38	100	92.917	ENSEEUG00000013489	RBM38	100	94.167	Erinaceus_europaeus
ENSCSAG00000015503	RBM38	81	66.495	ENSELUG00000000585	-	84	66.495	Esox_lucius
ENSCSAG00000015503	RBM38	90	66.667	ENSELUG00000005849	-	95	66.667	Esox_lucius
ENSCSAG00000015503	RBM38	100	96.234	ENSFCAG00000042916	RBM38	100	98.347	Felis_catus
ENSCSAG00000015503	RBM38	75	83.708	ENSFALG00000010805	RBM38	93	83.799	Ficedula_albicollis
ENSCSAG00000015503	RBM38	89	72.430	ENSFHEG00000006160	-	92	72.430	Fundulus_heteroclitus
ENSCSAG00000015503	RBM38	89	57.940	ENSFHEG00000017748	rbm38	91	57.940	Fundulus_heteroclitus
ENSCSAG00000015503	RBM38	76	71.271	ENSGMOG00000016655	-	96	74.725	Gadus_morhua
ENSCSAG00000015503	RBM38	90	79.358	ENSGALG00000026081	RBM38	100	79.358	Gallus_gallus
ENSCSAG00000015503	RBM38	89	63.333	ENSGACG00000015224	rbm38	98	63.333	Gasterosteus_aculeatus
ENSCSAG00000015503	RBM38	90	67.117	ENSGACG00000009873	-	100	66.816	Gasterosteus_aculeatus
ENSCSAG00000015503	RBM38	90	81.651	ENSGAGG00000001187	RBM38	100	81.651	Gopherus_agassizii
ENSCSAG00000015503	RBM38	89	70.642	ENSHBUG00000011778	-	92	70.776	Haplochromis_burtoni
ENSCSAG00000015503	RBM38	96	59.336	ENSHBUG00000012058	rbm38	98	59.336	Haplochromis_burtoni
ENSCSAG00000015503	RBM38	100	92.050	ENSHGLG00000015077	RBM38	100	92.050	Heterocephalus_glaber_female
ENSCSAG00000015503	RBM38	79	72.396	ENSHCOG00000005622	-	54	73.438	Hippocampus_comes
ENSCSAG00000015503	RBM38	70	64.072	ENSHCOG00000019040	rbm38	70	64.072	Hippocampus_comes
ENSCSAG00000015503	RBM38	91	65.086	ENSIPUG00000019349	-	95	65.086	Ictalurus_punctatus
ENSCSAG00000015503	RBM38	88	54.274	ENSKMAG00000012402	rbm38	98	54.701	Kryptolebias_marmoratus
ENSCSAG00000015503	RBM38	89	59.227	ENSLBEG00000018878	rbm38	91	59.227	Labrus_bergylta
ENSCSAG00000015503	RBM38	89	69.266	ENSLBEG00000016163	RBM38	92	69.863	Labrus_bergylta
ENSCSAG00000015503	RBM38	91	72.000	ENSLOCG00000003456	rbm38	95	72.000	Lepisosteus_oculatus
ENSCSAG00000015503	RBM38	98	100.000	ENSMFAG00000043808	RBM38	98	100.000	Macaca_fascicularis
ENSCSAG00000015503	RBM38	100	100.000	ENSMMUG00000031391	RBM38	100	100.000	Macaca_mulatta
ENSCSAG00000015503	RBM38	100	100.000	ENSMNEG00000034683	RBM38	100	100.000	Macaca_nemestrina
ENSCSAG00000015503	RBM38	90	64.255	ENSMAMG00000020499	RBM38	95	65.254	Mastacembelus_armatus
ENSCSAG00000015503	RBM38	89	59.657	ENSMAMG00000024135	rbm38	91	59.657	Mastacembelus_armatus
ENSCSAG00000015503	RBM38	89	58.369	ENSMZEG00005026036	rbm38	91	58.369	Maylandia_zebra
ENSCSAG00000015503	RBM38	89	70.642	ENSMZEG00005000849	-	92	70.776	Maylandia_zebra
ENSCSAG00000015503	RBM38	100	92.469	ENSMAUG00000021211	Rbm38	100	92.469	Mesocricetus_auratus
ENSCSAG00000015503	RBM38	90	96.759	ENSMICG00000038011	RBM38	100	96.759	Microcebus_murinus
ENSCSAG00000015503	RBM38	100	91.632	ENSMOCG00000008715	Rbm38	100	91.632	Microtus_ochrogaster
ENSCSAG00000015503	RBM38	99	67.511	ENSMMOG00000020051	-	99	67.647	Mola_mola
ENSCSAG00000015503	RBM38	100	79.668	ENSMODG00000016458	RBM38	100	79.668	Monodelphis_domestica
ENSCSAG00000015503	RBM38	90	56.221	ENSMALG00000022327	rbm38	93	57.522	Monopterus_albus
ENSCSAG00000015503	RBM38	78	74.074	ENSMALG00000004680	RBM38	70	74.074	Monopterus_albus
ENSCSAG00000015503	RBM38	100	93.305	MGP_CAROLIEiJ_G0024745	Rbm38	100	93.305	Mus_caroli
ENSCSAG00000015503	RBM38	100	93.724	ENSMUSG00000027510	Rbm38	100	93.724	Mus_musculus
ENSCSAG00000015503	RBM38	100	92.887	MGP_PahariEiJ_G0026186	Rbm38	100	92.887	Mus_pahari
ENSCSAG00000015503	RBM38	100	93.305	MGP_SPRETEiJ_G0025665	Rbm38	100	93.305	Mus_spretus
ENSCSAG00000015503	RBM38	78	97.838	ENSMPUG00000006518	RBM38	93	97.861	Mustela_putorius_furo
ENSCSAG00000015503	RBM38	90	91.667	ENSMLUG00000011140	RBM38	100	91.667	Myotis_lucifugus
ENSCSAG00000015503	RBM38	89	66.087	ENSNBRG00000022545	-	92	66.234	Neolamprologus_brichardi
ENSCSAG00000015503	RBM38	96	60.000	ENSNBRG00000022685	rbm38	98	60.000	Neolamprologus_brichardi
ENSCSAG00000015503	RBM38	58	80.435	ENSMEUG00000005475	-	100	80.435	Notamacropus_eugenii
ENSCSAG00000015503	RBM38	100	96.653	ENSODEG00000007980	RBM38	100	96.653	Octodon_degus
ENSCSAG00000015503	RBM38	88	58.621	ENSONIG00000017073	rbm38	93	58.621	Oreochromis_niloticus
ENSCSAG00000015503	RBM38	88	65.939	ENSONIG00000020324	-	92	66.087	Oreochromis_niloticus
ENSCSAG00000015503	RBM38	97	78.355	ENSOANG00000009259	RBM38	90	77.447	Ornithorhynchus_anatinus
ENSCSAG00000015503	RBM38	89	62.069	ENSORLG00000027180	-	92	64.530	Oryzias_latipes
ENSCSAG00000015503	RBM38	89	56.410	ENSORLG00000012154	rbm38	77	60.914	Oryzias_latipes
ENSCSAG00000015503	RBM38	89	62.069	ENSORLG00020020751	-	95	62.249	Oryzias_latipes_hni
ENSCSAG00000015503	RBM38	89	56.410	ENSORLG00020017871	rbm38	91	56.410	Oryzias_latipes_hni
ENSCSAG00000015503	RBM38	89	62.338	ENSORLG00015017040	-	92	65.086	Oryzias_latipes_hsok
ENSCSAG00000015503	RBM38	97	57.872	ENSORLG00015012606	rbm38	97	57.872	Oryzias_latipes_hsok
ENSCSAG00000015503	RBM38	89	62.174	ENSOMEG00000023912	-	92	64.502	Oryzias_melastigma
ENSCSAG00000015503	RBM38	82	61.929	ENSOMEG00000006805	rbm38	77	61.929	Oryzias_melastigma
ENSCSAG00000015503	RBM38	100	97.500	ENSOGAG00000029136	RBM38	100	97.500	Otolemur_garnettii
ENSCSAG00000015503	RBM38	100	96.234	ENSPPRG00000009507	RBM38	100	98.347	Panthera_pardus
ENSCSAG00000015503	RBM38	83	99.490	ENSPTRG00000013661	RBM38	100	99.174	Pan_troglodytes
ENSCSAG00000015503	RBM38	54	97.656	ENSPTRG00000045845	-	70	97.656	Pan_troglodytes
ENSCSAG00000015503	RBM38	99	76.695	ENSPANG00000033127	-	100	76.695	Papio_anubis
ENSCSAG00000015503	RBM38	100	100.000	ENSPANG00000020919	-	100	100.000	Papio_anubis
ENSCSAG00000015503	RBM38	91	68.000	ENSPKIG00000018122	-	100	88.034	Paramormyrops_kingsleyae
ENSCSAG00000015503	RBM38	94	62.705	ENSPKIG00000025417	rbm38	98	62.705	Paramormyrops_kingsleyae
ENSCSAG00000015503	RBM38	93	79.464	ENSPSIG00000011649	RBM38	95	79.464	Pelodiscus_sinensis
ENSCSAG00000015503	RBM38	90	55.882	ENSPMGG00000011343	rbm38	94	57.143	Periophthalmus_magnuspinnatus
ENSCSAG00000015503	RBM38	89	63.519	ENSPMGG00000017094	-	92	64.103	Periophthalmus_magnuspinnatus
ENSCSAG00000015503	RBM38	100	79.253	ENSPCIG00000013648	RBM38	100	79.253	Phascolarctos_cinereus
ENSCSAG00000015503	RBM38	89	55.983	ENSPFOG00000011658	rbm38	91	58.547	Poecilia_formosa
ENSCSAG00000015503	RBM38	89	66.387	ENSPLAG00000002500	-	92	66.949	Poecilia_latipinna
ENSCSAG00000015503	RBM38	89	56.838	ENSPLAG00000005218	rbm38	91	58.547	Poecilia_latipinna
ENSCSAG00000015503	RBM38	89	55.983	ENSPMEG00000015770	rbm38	91	58.547	Poecilia_mexicana
ENSCSAG00000015503	RBM38	89	56.410	ENSPREG00000007398	rbm38	91	58.974	Poecilia_reticulata
ENSCSAG00000015503	RBM38	100	95.833	ENSPCOG00000026201	RBM38	100	99.180	Propithecus_coquereli
ENSCSAG00000015503	RBM38	100	66.946	ENSPVAG00000006457	RBM38	100	66.946	Pteropus_vampyrus
ENSCSAG00000015503	RBM38	96	58.824	ENSPNYG00000021373	rbm38	98	58.996	Pundamilia_nyererei
ENSCSAG00000015503	RBM38	89	70.642	ENSPNYG00000019727	-	100	89.744	Pundamilia_nyererei
ENSCSAG00000015503	RBM38	78	69.892	ENSPNAG00000010596	rbm38	76	69.892	Pygocentrus_nattereri
ENSCSAG00000015503	RBM38	91	66.522	ENSPNAG00000015123	-	96	78.030	Pygocentrus_nattereri
ENSCSAG00000015503	RBM38	100	93.305	ENSRNOG00000006420	Rbm38	100	93.305	Rattus_norvegicus
ENSCSAG00000015503	RBM38	100	81.857	ENSRROG00000036388	-	100	81.857	Rhinopithecus_roxellana
ENSCSAG00000015503	RBM38	90	96.759	ENSSBOG00000031053	RBM38	100	100.000	Saimiri_boliviensis_boliviensis
ENSCSAG00000015503	RBM38	89	65.315	ENSSFOG00015004453	rbm38	92	68.468	Scleropages_formosus
ENSCSAG00000015503	RBM38	89	60.515	ENSSDUG00000022611	rbm38	91	60.515	Seriola_dumerili
ENSCSAG00000015503	RBM38	89	65.368	ENSSDUG00000021082	RBM38	92	66.667	Seriola_dumerili
ENSCSAG00000015503	RBM38	89	65.368	ENSSLDG00000011778	RBM38	92	66.667	Seriola_lalandi_dorsalis
ENSCSAG00000015503	RBM38	89	64.019	ENSSLDG00000010845	rbm38	90	64.019	Seriola_lalandi_dorsalis
ENSCSAG00000015503	RBM38	89	68.246	ENSSPAG00000020989	RBM38	91	69.014	Stegastes_partitus
ENSCSAG00000015503	RBM38	89	59.657	ENSSPAG00000011113	rbm38	91	59.657	Stegastes_partitus
ENSCSAG00000015503	RBM38	100	96.653	ENSSSCG00000007504	RBM38	100	96.653	Sus_scrofa
ENSCSAG00000015503	RBM38	89	66.810	ENSTRUG00000019869	-	92	68.240	Takifugu_rubripes
ENSCSAG00000015503	RBM38	89	55.459	ENSTRUG00000024954	rbm38	91	56.332	Takifugu_rubripes
ENSCSAG00000015503	RBM38	89	70.136	ENSTNIG00000007093	-	97	70.721	Tetraodon_nigroviridis
ENSCSAG00000015503	RBM38	65	89.916	ENSTBEG00000001689	-	64	89.916	Tupaia_belangeri
ENSCSAG00000015503	RBM38	100	96.653	ENSUAMG00000019780	RBM38	100	96.653	Ursus_americanus
ENSCSAG00000015503	RBM38	100	95.397	ENSVVUG00000017246	RBM38	100	95.397	Vulpes_vulpes
ENSCSAG00000015503	RBM38	92	74.667	ENSXETG00000011268	rbm38	100	75.111	Xenopus_tropicalis
ENSCSAG00000015503	RBM38	54	78.947	ENSXCOG00000017324	-	60	78.947	Xiphophorus_couchianus
ENSCSAG00000015503	RBM38	89	58.369	ENSXMAG00000023662	rbm38	91	58.798	Xiphophorus_maculatus