EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000015623 (Gene tree)
Gene ID: 103222927
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 41194 bases
Position: chr4:66658212-66699405
Accession: 103222927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000011709	MRP-S27	PF10037.9	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000013719	PTCD2-201	5742	-	ENSCSAP00000011709	383 (aa)	XP_007973087	A0A0D9RSX0

Gene Model

Click here to download ENSCSAG00000015623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000015623's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000015623	PTCD2	100	91.906	ENSG00000049883	PTCD2	100	92.611	Homo_sapiens
ENSCSAG00000015623	PTCD2	98	46.933	ENSAPOG00000020682	ptcd2	91	47.989	Acanthochromis_polyacanthus
ENSCSAG00000015623	PTCD2	100	78.329	ENSAMEG00000007194	PTCD2	99	78.329	Ailuropoda_melanoleuca
ENSCSAG00000015623	PTCD2	90	41.834	ENSACIG00000002053	ptcd2	100	41.834	Amphilophus_citrinellus
ENSCSAG00000015623	PTCD2	98	46.400	ENSAOCG00000006616	ptcd2	89	47.126	Amphiprion_ocellaris
ENSCSAG00000015623	PTCD2	98	46.400	ENSAPEG00000022926	ptcd2	89	47.126	Amphiprion_percula
ENSCSAG00000015623	PTCD2	99	57.480	ENSACAG00000009747	PTCD2	97	57.480	Anolis_carolinensis
ENSCSAG00000015623	PTCD2	100	89.295	ENSANAG00000029353	PTCD2	99	89.295	Aotus_nancymaae
ENSCSAG00000015623	PTCD2	98	44.118	ENSACLG00000027742	ptcd2	89	45.115	Astatotilapia_calliptera
ENSCSAG00000015623	PTCD2	86	45.122	ENSAMXG00000029404	ptcd2	86	45.062	Astyanax_mexicanus
ENSCSAG00000015623	PTCD2	100	81.510	ENSBTAG00000014675	PTCD2	100	81.510	Bos_taurus
ENSCSAG00000015623	PTCD2	100	88.512	ENSCJAG00000016364	PTCD2	99	88.512	Callithrix_jacchus
ENSCSAG00000015623	PTCD2	100	77.546	ENSCAFG00000007982	PTCD2	90	77.546	Canis_familiaris
ENSCSAG00000015623	PTCD2	90	79.480	ENSCAFG00020019147	PTCD2	97	79.480	Canis_lupus_dingo
ENSCSAG00000015623	PTCD2	100	81.510	ENSCHIG00000017118	PTCD2	100	81.510	Capra_hircus
ENSCSAG00000015623	PTCD2	100	76.762	ENSCPOG00000040168	PTCD2	100	76.762	Cavia_porcellus
ENSCSAG00000015623	PTCD2	100	88.251	ENSCCAG00000029389	-	99	88.251	Cebus_capucinus
ENSCSAG00000015623	PTCD2	83	80.878	ENSCCAG00000021996	-	98	80.878	Cebus_capucinus
ENSCSAG00000015623	PTCD2	100	95.561	ENSCATG00000019069	PTCD2	100	95.561	Cercocebus_atys
ENSCSAG00000015623	PTCD2	100	74.413	ENSCLAG00000000072	PTCD2	100	74.413	Chinchilla_lanigera
ENSCSAG00000015623	PTCD2	90	59.195	ENSCHOG00000010634	PTCD2	100	59.195	Choloepus_hoffmanni
ENSCSAG00000015623	PTCD2	100	55.091	ENSCPBG00000000216	PTCD2	90	58.286	Chrysemys_picta_bellii
ENSCSAG00000015623	PTCD2	100	95.822	ENSCANG00000035636	PTCD2	99	95.822	Colobus_angolensis_palliatus
ENSCSAG00000015623	PTCD2	100	73.629	ENSCGRG00001015289	Ptcd2	84	73.629	Cricetulus_griseus_chok1gshd
ENSCSAG00000015623	PTCD2	100	73.629	ENSCGRG00000006193	Ptcd2	84	73.629	Cricetulus_griseus_crigri
ENSCSAG00000015623	PTCD2	98	44.385	ENSCVAG00000001285	ptcd2	89	45.977	Cyprinodon_variegatus
ENSCSAG00000015623	PTCD2	99	44.764	ENSDARG00000035391	ptcd2	99	44.764	Danio_rerio
ENSCSAG00000015623	PTCD2	100	76.501	ENSDNOG00000008719	PTCD2	100	76.501	Dasypus_novemcinctus
ENSCSAG00000015623	PTCD2	100	78.295	ENSDORG00000004921	Ptcd2	100	78.036	Dipodomys_ordii
ENSCSAG00000015623	PTCD2	100	68.490	ENSETEG00000016542	PTCD2	99	68.490	Echinops_telfairi
ENSCSAG00000015623	PTCD2	100	80.157	ENSEASG00005018038	PTCD2	100	80.157	Equus_asinus_asinus
ENSCSAG00000015623	PTCD2	100	80.157	ENSECAG00000007022	PTCD2	98	80.157	Equus_caballus
ENSCSAG00000015623	PTCD2	100	72.846	ENSEEUG00000014031	PTCD2	99	72.846	Erinaceus_europaeus
ENSCSAG00000015623	PTCD2	91	51.852	ENSELUG00000003584	ptcd2	91	51.852	Esox_lucius
ENSCSAG00000015623	PTCD2	100	73.368	ENSFCAG00000045432	PTCD2	82	73.368	Felis_catus
ENSCSAG00000015623	PTCD2	85	52.599	ENSFALG00000010299	PTCD2	99	52.599	Ficedula_albicollis
ENSCSAG00000015623	PTCD2	100	78.068	ENSFDAG00000018461	PTCD2	100	78.068	Fukomys_damarensis
ENSCSAG00000015623	PTCD2	91	51.282	ENSGMOG00000003637	ptcd2	91	51.282	Gadus_morhua
ENSCSAG00000015623	PTCD2	92	50.565	ENSGALG00000038260	PTCD2	100	48.958	Gallus_gallus
ENSCSAG00000015623	PTCD2	99	58.115	ENSGAGG00000021952	PTCD2	90	61.429	Gopherus_agassizii
ENSCSAG00000015623	PTCD2	100	91.645	ENSGGOG00000010695	PTCD2	99	91.645	Gorilla_gorilla
ENSCSAG00000015623	PTCD2	98	44.267	ENSHBUG00000009191	ptcd2	89	45.115	Haplochromis_burtoni
ENSCSAG00000015623	PTCD2	100	75.718	ENSHGLG00000001234	PTCD2	100	75.718	Heterocephalus_glaber_female
ENSCSAG00000015623	PTCD2	100	75.718	ENSHGLG00100015419	PTCD2	100	75.718	Heterocephalus_glaber_male
ENSCSAG00000015623	PTCD2	98	46.154	ENSHCOG00000001703	ptcd2	90	47.278	Hippocampus_comes
ENSCSAG00000015623	PTCD2	85	45.370	ENSIPUG00000006080	ptcd2	90	45.376	Ictalurus_punctatus
ENSCSAG00000015623	PTCD2	99	79.581	ENSSTOG00000006596	PTCD2	99	79.581	Ictidomys_tridecemlineatus
ENSCSAG00000015623	PTCD2	100	77.807	ENSJJAG00000024388	Ptcd2	100	77.807	Jaculus_jaculus
ENSCSAG00000015623	PTCD2	94	43.454	ENSKMAG00000009329	ptcd2	91	43.590	Kryptolebias_marmoratus
ENSCSAG00000015623	PTCD2	98	45.600	ENSLBEG00000024871	ptcd2	88	47.110	Labrus_bergylta
ENSCSAG00000015623	PTCD2	95	54.918	ENSLOCG00000011122	ptcd2	91	56.410	Lepisosteus_oculatus
ENSCSAG00000015623	PTCD2	81	78.135	ENSLAFG00000004115	PTCD2	100	78.135	Loxodonta_africana
ENSCSAG00000015623	PTCD2	100	96.606	ENSMFAG00000031516	PTCD2	99	96.606	Macaca_fascicularis
ENSCSAG00000015623	PTCD2	100	96.345	ENSMNEG00000007537	PTCD2	100	96.345	Macaca_nemestrina
ENSCSAG00000015623	PTCD2	100	95.822	ENSMLEG00000031093	PTCD2	99	95.822	Mandrillus_leucophaeus
ENSCSAG00000015623	PTCD2	98	47.594	ENSMAMG00000018529	ptcd2	91	49.138	Mastacembelus_armatus
ENSCSAG00000015623	PTCD2	98	44.118	ENSMZEG00005003625	ptcd2	89	45.115	Maylandia_zebra
ENSCSAG00000015623	PTCD2	91	51.724	ENSMGAG00000005033	PTCD2	100	51.724	Meleagris_gallopavo
ENSCSAG00000015623	PTCD2	100	57.963	ENSMAUG00000020253	Ptcd2	100	57.963	Mesocricetus_auratus
ENSCSAG00000015623	PTCD2	100	80.679	ENSMICG00000004535	PTCD2	99	80.679	Microcebus_murinus
ENSCSAG00000015623	PTCD2	100	73.368	ENSMOCG00000019985	Ptcd2	100	73.368	Microtus_ochrogaster
ENSCSAG00000015623	PTCD2	100	58.594	ENSMODG00000001695	PTCD2	100	58.594	Monodelphis_domestica
ENSCSAG00000015623	PTCD2	98	49.067	ENSMALG00000022372	ptcd2	91	50.575	Monopterus_albus
ENSCSAG00000015623	PTCD2	100	73.107	MGP_CAROLIEiJ_G0018829	Ptcd2	100	73.107	Mus_caroli
ENSCSAG00000015623	PTCD2	100	72.324	ENSMUSG00000021650	Ptcd2	100	72.324	Mus_musculus
ENSCSAG00000015623	PTCD2	100	74.935	MGP_PahariEiJ_G0015904	Ptcd2	100	74.935	Mus_pahari
ENSCSAG00000015623	PTCD2	100	72.846	MGP_SPRETEiJ_G0019711	Ptcd2	100	72.846	Mus_spretus
ENSCSAG00000015623	PTCD2	100	80.418	ENSMPUG00000014401	PTCD2	100	80.418	Mustela_putorius_furo
ENSCSAG00000015623	PTCD2	100	78.590	ENSMLUG00000007374	PTCD2	99	78.590	Myotis_lucifugus
ENSCSAG00000015623	PTCD2	100	73.629	ENSNGAG00000005027	Ptcd2	100	73.629	Nannospalax_galili
ENSCSAG00000015623	PTCD2	86	44.242	ENSNBRG00000000092	-	100	44.242	Neolamprologus_brichardi
ENSCSAG00000015623	PTCD2	98	44.385	ENSNBRG00000008174	ptcd2	91	45.402	Neolamprologus_brichardi
ENSCSAG00000015623	PTCD2	100	91.645	ENSNLEG00000004516	PTCD2	99	91.645	Nomascus_leucogenys
ENSCSAG00000015623	PTCD2	100	47.520	ENSMEUG00000014012	-	82	58.537	Notamacropus_eugenii
ENSCSAG00000015623	PTCD2	100	73.629	ENSOPRG00000007290	PTCD2	99	73.629	Ochotona_princeps
ENSCSAG00000015623	PTCD2	100	77.546	ENSODEG00000016417	PTCD2	100	77.546	Octodon_degus
ENSCSAG00000015623	PTCD2	82	45.714	ENSONIG00000011269	ptcd2	85	47.059	Oreochromis_niloticus
ENSCSAG00000015623	PTCD2	95	80.274	ENSOCUG00000007970	PTCD2	100	78.851	Oryctolagus_cuniculus
ENSCSAG00000015623	PTCD2	98	46.400	ENSORLG00000003851	ptcd2	88	47.688	Oryzias_latipes
ENSCSAG00000015623	PTCD2	98	45.600	ENSORLG00020009823	ptcd2	90	46.821	Oryzias_latipes_hni
ENSCSAG00000015623	PTCD2	90	47.399	ENSORLG00015016777	ptcd2	99	47.399	Oryzias_latipes_hsok
ENSCSAG00000015623	PTCD2	94	44.847	ENSOMEG00000012396	ptcd2	84	45.954	Oryzias_melastigma
ENSCSAG00000015623	PTCD2	100	74.413	ENSOGAG00000008390	PTCD2	99	74.413	Otolemur_garnettii
ENSCSAG00000015623	PTCD2	100	81.250	ENSOARG00000005087	PTCD2	99	81.250	Ovis_aries
ENSCSAG00000015623	PTCD2	100	91.384	ENSPPAG00000028480	PTCD2	99	91.384	Pan_paniscus
ENSCSAG00000015623	PTCD2	100	91.123	ENSPTRG00000016968	PTCD2	99	91.123	Pan_troglodytes
ENSCSAG00000015623	PTCD2	90	96.812	ENSPANG00000006611	PTCD2	89	96.812	Papio_anubis
ENSCSAG00000015623	PTCD2	93	48.459	ENSPKIG00000019896	ptcd2	92	48.725	Paramormyrops_kingsleyae
ENSCSAG00000015623	PTCD2	83	60.815	ENSPSIG00000014559	PTCD2	96	62.460	Pelodiscus_sinensis
ENSCSAG00000015623	PTCD2	100	72.727	ENSPEMG00000000884	Ptcd2	100	72.727	Peromyscus_maniculatus_bairdii
ENSCSAG00000015623	PTCD2	100	60.677	ENSPCIG00000029047	PTCD2	100	60.156	Phascolarctos_cinereus
ENSCSAG00000015623	PTCD2	98	44.000	ENSPLAG00000010456	ptcd2	91	45.115	Poecilia_latipinna
ENSCSAG00000015623	PTCD2	98	44.267	ENSPREG00000021797	ptcd2	88	45.115	Poecilia_reticulata
ENSCSAG00000015623	PTCD2	100	78.590	ENSPPYG00000015543	PTCD2	99	78.590	Pongo_abelii
ENSCSAG00000015623	PTCD2	81	66.343	ENSPCAG00000006806	PTCD2	98	66.343	Procavia_capensis
ENSCSAG00000015623	PTCD2	100	75.718	ENSPVAG00000010935	PTCD2	99	75.718	Pteropus_vampyrus
ENSCSAG00000015623	PTCD2	98	44.118	ENSPNYG00000003122	ptcd2	89	45.115	Pundamilia_nyererei
ENSCSAG00000015623	PTCD2	98	48.413	ENSPNAG00000021490	ptcd2	91	50.286	Pygocentrus_nattereri
ENSCSAG00000015623	PTCD2	100	72.846	ENSRNOG00000028403	Ptcd2	100	72.846	Rattus_norvegicus
ENSCSAG00000015623	PTCD2	100	89.817	ENSRBIG00000032929	PTCD2	99	89.817	Rhinopithecus_bieti
ENSCSAG00000015623	PTCD2	100	95.300	ENSRROG00000000080	PTCD2	100	95.300	Rhinopithecus_roxellana
ENSCSAG00000015623	PTCD2	100	86.945	ENSSBOG00000018911	PTCD2	100	86.945	Saimiri_boliviensis_boliviensis
ENSCSAG00000015623	PTCD2	100	59.635	ENSSHAG00000003833	PTCD2	99	59.115	Sarcophilus_harrisii
ENSCSAG00000015623	PTCD2	94	47.107	ENSSFOG00015015415	ptcd2	91	47.309	Scleropages_formosus
ENSCSAG00000015623	PTCD2	98	43.467	ENSSMAG00000010350	ptcd2	90	45.245	Scophthalmus_maximus
ENSCSAG00000015623	PTCD2	98	47.733	ENSSDUG00000008142	ptcd2	87	48.991	Seriola_dumerili
ENSCSAG00000015623	PTCD2	98	48.000	ENSSLDG00000015284	ptcd2	91	49.280	Seriola_lalandi_dorsalis
ENSCSAG00000015623	PTCD2	81	69.579	ENSSARG00000004983	PTCD2	99	69.579	Sorex_araneus
ENSCSAG00000015623	PTCD2	100	51.948	ENSSPUG00000000176	PTCD2	88	54.286	Sphenodon_punctatus
ENSCSAG00000015623	PTCD2	98	44.800	ENSSPAG00000008591	ptcd2	89	45.977	Stegastes_partitus
ENSCSAG00000015623	PTCD2	100	80.679	ENSSSCG00000016975	PTCD2	90	80.679	Sus_scrofa
ENSCSAG00000015623	PTCD2	90	52.754	ENSTGUG00000005705	PTCD2	99	52.754	Taeniopygia_guttata
ENSCSAG00000015623	PTCD2	100	76.762	ENSTBEG00000016559	PTCD2	99	76.762	Tupaia_belangeri
ENSCSAG00000015623	PTCD2	100	80.469	ENSTTRG00000011851	PTCD2	99	80.469	Tursiops_truncatus
ENSCSAG00000015623	PTCD2	100	78.590	ENSUAMG00000007583	PTCD2	90	78.590	Ursus_americanus
ENSCSAG00000015623	PTCD2	100	78.329	ENSUMAG00000007666	PTCD2	100	78.329	Ursus_maritimus
ENSCSAG00000015623	PTCD2	100	79.167	ENSVPAG00000009597	PTCD2	99	79.167	Vicugna_pacos
ENSCSAG00000015623	PTCD2	100	77.807	ENSVVUG00000007299	-	100	77.807	Vulpes_vulpes
ENSCSAG00000015623	PTCD2	94	53.333	ENSXETG00000031652	PTCD2	92	54.131	Xenopus_tropicalis
ENSCSAG00000015623	PTCD2	91	45.115	ENSXMAG00000005940	ptcd2	82	45.115	Xiphophorus_maculatus