EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000015688 (Gene tree)
Gene ID: 103222822
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 30892 bases
Position: chr4:65754494-65785385
Accession: 103222822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000011744	SMN	PF06003.12	1.1e-106	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000013754	-	2312	-	ENSCSAP00000011744	294 (aa)	XP_007972924	A0A0D9RT05

Gene Model

Click here to download ENSCSAG00000015688's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000015688's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000015688	-	100	96.939	ENSG00000205571	SMN2	100	96.939	Homo_sapiens
ENSCSAG00000015688	-	100	96.939	ENSG00000172062	SMN1	100	96.939	Homo_sapiens
ENSCSAG00000015688	-	91	52.174	ENSAPOG00000011324	smn1	94	52.878	Acanthochromis_polyacanthus
ENSCSAG00000015688	-	95	88.256	ENSAMEG00000003316	-	93	88.256	Ailuropoda_melanoleuca
ENSCSAG00000015688	-	88	51.685	ENSACIG00000019772	-	97	50.769	Amphilophus_citrinellus
ENSCSAG00000015688	-	91	52.174	ENSAOCG00000024444	smn1	94	52.878	Amphiprion_ocellaris
ENSCSAG00000015688	-	91	52.536	ENSAPEG00000016504	smn1	94	53.237	Amphiprion_percula
ENSCSAG00000015688	-	88	54.244	ENSATEG00000002182	smn1	79	54.924	Anabas_testudineus
ENSCSAG00000015688	-	68	56.000	ENSAPLG00000010912	-	97	54.500	Anas_platyrhynchos
ENSCSAG00000015688	-	93	58.214	ENSACAG00000010017	-	95	57.295	Anolis_carolinensis
ENSCSAG00000015688	-	100	90.878	ENSANAG00000032133	-	100	90.878	Aotus_nancymaae
ENSCSAG00000015688	-	91	53.047	ENSACLG00000007308	smn1	88	53.160	Astatotilapia_calliptera
ENSCSAG00000015688	-	95	83.986	ENSBTAG00000005743	SMN2	97	81.851	Bos_taurus
ENSCSAG00000015688	-	100	92.542	ENSCJAG00000016290	-	100	96.703	Callithrix_jacchus
ENSCSAG00000015688	-	95	87.189	ENSCAFG00000007812	SMN	97	87.189	Canis_familiaris
ENSCSAG00000015688	-	95	87.189	ENSCAFG00020019229	-	90	87.189	Canis_lupus_dingo
ENSCSAG00000015688	-	95	84.752	ENSCHIG00000015559	-	95	82.624	Capra_hircus
ENSCSAG00000015688	-	99	88.356	ENSTSYG00000012058	-	96	93.750	Carlito_syrichta
ENSCSAG00000015688	-	76	68.860	ENSCAPG00000011021	-	100	69.298	Cavia_aperea
ENSCSAG00000015688	-	98	81.757	ENSCPOG00000012328	-	96	82.230	Cavia_porcellus
ENSCSAG00000015688	-	99	82.594	ENSCPOG00000036973	-	99	82.253	Cavia_porcellus
ENSCSAG00000015688	-	100	92.857	ENSCCAG00000018127	-	100	95.604	Cebus_capucinus
ENSCSAG00000015688	-	100	97.619	ENSCATG00000037002	-	100	97.802	Cercocebus_atys
ENSCSAG00000015688	-	99	80.135	ENSCLAG00000000284	-	99	80.135	Chinchilla_lanigera
ENSCSAG00000015688	-	85	74.206	ENSCHOG00000007346	-	100	74.206	Choloepus_hoffmanni
ENSCSAG00000015688	-	98	61.017	ENSCPBG00000010968	-	99	62.222	Chrysemys_picta_bellii
ENSCSAG00000015688	-	95	91.429	ENSCANG00000033324	-	95	90.357	Colobus_angolensis_palliatus
ENSCSAG00000015688	-	100	98.299	ENSCANG00000038242	-	100	98.299	Colobus_angolensis_palliatus
ENSCSAG00000015688	-	99	83.219	ENSCGRG00001017959	-	97	83.986	Cricetulus_griseus_chok1gshd
ENSCSAG00000015688	-	99	64.384	ENSCGRG00001016998	-	96	62.278	Cricetulus_griseus_chok1gshd
ENSCSAG00000015688	-	99	83.219	ENSCGRG00000007698	Smn1	97	83.986	Cricetulus_griseus_crigri
ENSCSAG00000015688	-	92	48.780	ENSCSEG00000015227	smn1	97	50.534	Cynoglossus_semilaevis
ENSCSAG00000015688	-	92	52.174	ENSCVAG00000007498	smn1	94	52.015	Cyprinodon_variegatus
ENSCSAG00000015688	-	93	53.873	ENSDARG00000018494	smn1	96	54.745	Danio_rerio
ENSCSAG00000015688	-	82	83.817	ENSDNOG00000007283	-	99	83.817	Dasypus_novemcinctus
ENSCSAG00000015688	-	71	74.038	ENSDNOG00000045949	-	86	72.059	Dasypus_novemcinctus
ENSCSAG00000015688	-	99	80.412	ENSDORG00000007082	Smn1	99	80.412	Dipodomys_ordii
ENSCSAG00000015688	-	71	70.476	ENSETEG00000001406	-	89	70.652	Echinops_telfairi
ENSCSAG00000015688	-	92	38.462	ENSEBUG00000011902	smn1	92	33.223	Eptatretus_burgeri
ENSCSAG00000015688	-	95	77.739	ENSEASG00005018000	-	89	83.858	Equus_asinus_asinus
ENSCSAG00000015688	-	95	88.929	ENSECAG00000015215	-	96	88.929	Equus_caballus
ENSCSAG00000015688	-	85	80.952	ENSEEUG00000015777	-	100	80.952	Erinaceus_europaeus
ENSCSAG00000015688	-	91	54.643	ENSELUG00000018067	smn1	94	51.636	Esox_lucius
ENSCSAG00000015688	-	99	88.014	ENSFCAG00000028292	SMN	97	89.324	Felis_catus
ENSCSAG00000015688	-	89	60.606	ENSFALG00000012320	-	94	58.824	Ficedula_albicollis
ENSCSAG00000015688	-	99	79.461	ENSFDAG00000017683	-	99	80.471	Fukomys_damarensis
ENSCSAG00000015688	-	61	57.303	ENSFHEG00000018508	smn1	96	50.923	Fundulus_heteroclitus
ENSCSAG00000015688	-	95	49.462	ENSGMOG00000017279	smn1	93	50.000	Gadus_morhua
ENSCSAG00000015688	-	91	59.926	ENSGALG00000002430	SMN	95	58.456	Gallus_gallus
ENSCSAG00000015688	-	91	52.574	ENSGAFG00000009501	smn1	94	51.292	Gambusia_affinis
ENSCSAG00000015688	-	91	54.647	ENSGACG00000010584	smn1	91	52.347	Gasterosteus_aculeatus
ENSCSAG00000015688	-	97	61.644	ENSGAGG00000011374	-	97	61.922	Gopherus_agassizii
ENSCSAG00000015688	-	91	39.151	ENSGAGG00000013639	-	56	51.515	Gopherus_agassizii
ENSCSAG00000015688	-	73	94.884	ENSGGOG00000026704	-	95	94.884	Gorilla_gorilla
ENSCSAG00000015688	-	98	82.986	ENSGGOG00000003872	-	100	83.094	Gorilla_gorilla
ENSCSAG00000015688	-	91	54.676	ENSHBUG00000013987	smn1	94	55.185	Haplochromis_burtoni
ENSCSAG00000015688	-	99	79.452	ENSHGLG00000001905	-	99	79.452	Heterocephalus_glaber_female
ENSCSAG00000015688	-	99	79.461	ENSHGLG00000001018	-	96	80.769	Heterocephalus_glaber_female
ENSCSAG00000015688	-	99	79.461	ENSHGLG00100011252	-	96	80.769	Heterocephalus_glaber_male
ENSCSAG00000015688	-	96	79.078	ENSHGLG00100018676	-	100	79.078	Heterocephalus_glaber_male
ENSCSAG00000015688	-	88	49.815	ENSHCOG00000017136	smn1	87	50.951	Hippocampus_comes
ENSCSAG00000015688	-	91	52.239	ENSIPUG00000012580	smn1	85	51.460	Ictalurus_punctatus
ENSCSAG00000015688	-	95	87.455	ENSSTOG00000012288	-	100	87.455	Ictidomys_tridecemlineatus
ENSCSAG00000015688	-	59	61.494	ENSJJAG00000014853	-	89	65.143	Jaculus_jaculus
ENSCSAG00000015688	-	91	54.417	ENSKMAG00000007239	smn1	96	53.053	Kryptolebias_marmoratus
ENSCSAG00000015688	-	91	54.417	ENSLBEG00000022550	smn1	94	53.957	Labrus_bergylta
ENSCSAG00000015688	-	91	36.972	ENSLACG00000009808	-	90	39.350	Latimeria_chalumnae
ENSCSAG00000015688	-	91	54.074	ENSLOCG00000011339	smn1	94	53.091	Lepisosteus_oculatus
ENSCSAG00000015688	-	99	83.446	ENSLAFG00000003425	-	93	84.561	Loxodonta_africana
ENSCSAG00000015688	-	100	99.320	ENSMFAG00000031523	SMN1	100	99.320	Macaca_fascicularis
ENSCSAG00000015688	-	100	93.197	ENSMFAG00000008812	-	100	93.197	Macaca_fascicularis
ENSCSAG00000015688	-	100	99.320	ENSMMUG00000020214	SMN1	100	99.320	Macaca_mulatta
ENSCSAG00000015688	-	100	92.517	ENSMMUG00000030594	-	100	92.517	Macaca_mulatta
ENSCSAG00000015688	-	100	98.980	ENSMNEG00000035094	-	100	98.980	Macaca_nemestrina
ENSCSAG00000015688	-	76	84.305	ENSMNEG00000036423	-	81	86.538	Macaca_nemestrina
ENSCSAG00000015688	-	100	98.639	ENSMLEG00000041902	-	100	98.639	Mandrillus_leucophaeus
ENSCSAG00000015688	-	91	53.285	ENSMAMG00000011034	smn1	94	52.174	Mastacembelus_armatus
ENSCSAG00000015688	-	91	53.333	ENSMZEG00005013634	smn1	94	54.513	Maylandia_zebra
ENSCSAG00000015688	-	67	56.281	ENSMGAG00000008889	-	95	54.271	Meleagris_gallopavo
ENSCSAG00000015688	-	99	81.164	ENSMAUG00000010262	Smn1	96	83.154	Mesocricetus_auratus
ENSCSAG00000015688	-	99	77.474	ENSMICG00000034708	-	99	87.912	Microcebus_murinus
ENSCSAG00000015688	-	99	82.594	ENSMOCG00000017833	Smn1	97	83.333	Microtus_ochrogaster
ENSCSAG00000015688	-	92	49.630	ENSMMOG00000005504	smn1	93	50.000	Mola_mola
ENSCSAG00000015688	-	96	68.881	ENSMODG00000001436	-	95	69.366	Monodelphis_domestica
ENSCSAG00000015688	-	91	51.460	ENSMALG00000008025	smn1	94	50.730	Monopterus_albus
ENSCSAG00000015688	-	99	82.935	MGP_CAROLIEiJ_G0018836	Smn1	96	84.286	Mus_caroli
ENSCSAG00000015688	-	99	82.935	ENSMUSG00000021645	Smn1	96	84.286	Mus_musculus
ENSCSAG00000015688	-	99	78.840	MGP_PahariEiJ_G0015911	Smn1	96	80.714	Mus_pahari
ENSCSAG00000015688	-	99	82.253	MGP_SPRETEiJ_G0019718	Smn1	96	83.571	Mus_spretus
ENSCSAG00000015688	-	95	88.214	ENSMPUG00000014470	-	95	89.219	Mustela_putorius_furo
ENSCSAG00000015688	-	95	87.805	ENSMLUG00000010603	-	92	87.805	Myotis_lucifugus
ENSCSAG00000015688	-	99	83.562	ENSNGAG00000019833	Smn1	97	85.053	Nannospalax_galili
ENSCSAG00000015688	-	91	54.448	ENSNBRG00000023000	smn1	94	55.185	Neolamprologus_brichardi
ENSCSAG00000015688	-	100	96.599	ENSNLEG00000004454	-	100	96.599	Nomascus_leucogenys
ENSCSAG00000015688	-	77	64.035	ENSMEUG00000011393	-	99	64.035	Notamacropus_eugenii
ENSCSAG00000015688	-	85	81.818	ENSOPRG00000002015	-	100	82.609	Ochotona_princeps
ENSCSAG00000015688	-	95	81.338	ENSODEG00000015976	-	97	81.338	Octodon_degus
ENSCSAG00000015688	-	54	64.375	ENSONIG00000011799	smn1	95	54.412	Oreochromis_niloticus
ENSCSAG00000015688	-	92	65.934	ENSOANG00000001626	-	95	65.201	Ornithorhynchus_anatinus
ENSCSAG00000015688	-	100	80.333	ENSOCUG00000026649	-	97	81.315	Oryctolagus_cuniculus
ENSCSAG00000015688	-	99	83.904	ENSOCUG00000017097	-	99	83.904	Oryctolagus_cuniculus
ENSCSAG00000015688	-	99	79.661	ENSOCUG00000025183	-	96	79.930	Oryctolagus_cuniculus
ENSCSAG00000015688	-	54	61.392	ENSORLG00000010552	smn1	94	53.137	Oryzias_latipes
ENSCSAG00000015688	-	91	52.416	ENSORLG00020007936	smn1	93	49.627	Oryzias_latipes_hni
ENSCSAG00000015688	-	54	57.927	ENSORLG00015022425	smn1	94	52.381	Oryzias_latipes_hsok
ENSCSAG00000015688	-	91	52.347	ENSOMEG00000007824	smn1	94	53.091	Oryzias_melastigma
ENSCSAG00000015688	-	91	80.812	ENSOGAG00000031414	-	94	80.812	Otolemur_garnettii
ENSCSAG00000015688	-	93	82.482	ENSOARG00000005425	-	99	80.292	Ovis_aries
ENSCSAG00000015688	-	100	96.599	ENSPPAG00000036640	-	100	96.703	Pan_paniscus
ENSCSAG00000015688	-	99	88.356	ENSPPRG00000005575	-	97	89.680	Panthera_pardus
ENSCSAG00000015688	-	99	88.699	ENSPTIG00000007745	-	97	90.036	Panthera_tigris_altaica
ENSCSAG00000015688	-	100	95.960	ENSPTRG00000016955	-	100	96.703	Pan_troglodytes
ENSCSAG00000015688	-	98	92.361	ENSPANG00000000253	-	98	92.361	Papio_anubis
ENSCSAG00000015688	-	100	98.980	ENSPANG00000013601	-	100	98.980	Papio_anubis
ENSCSAG00000015688	-	91	51.087	ENSPKIG00000011096	smn1	94	52.985	Paramormyrops_kingsleyae
ENSCSAG00000015688	-	92	60.563	ENSPSIG00000014787	-	90	58.803	Pelodiscus_sinensis
ENSCSAG00000015688	-	91	50.360	ENSPMGG00000012285	smn1	94	51.136	Periophthalmus_magnuspinnatus
ENSCSAG00000015688	-	89	41.791	ENSPMAG00000005004	smn1	91	40.433	Petromyzon_marinus
ENSCSAG00000015688	-	96	70.175	ENSPCIG00000025764	-	97	69.858	Phascolarctos_cinereus
ENSCSAG00000015688	-	91	52.941	ENSPFOG00000007786	smn1	94	52.941	Poecilia_formosa
ENSCSAG00000015688	-	91	53.309	ENSPLAG00000012071	smn1	94	53.309	Poecilia_latipinna
ENSCSAG00000015688	-	91	52.941	ENSPMEG00000017085	smn1	94	52.941	Poecilia_mexicana
ENSCSAG00000015688	-	91	54.044	ENSPREG00000005824	smn1	94	52.768	Poecilia_reticulata
ENSCSAG00000015688	-	85	58.000	ENSPPYG00000019189	-	99	57.600	Pongo_abelii
ENSCSAG00000015688	-	91	95.539	ENSPPYG00000015533	-	97	95.539	Pongo_abelii
ENSCSAG00000015688	-	90	81.481	ENSPCAG00000004187	-	99	81.111	Procavia_capensis
ENSCSAG00000015688	-	88	72.243	ENSPCOG00000022307	-	99	73.004	Propithecus_coquereli
ENSCSAG00000015688	-	99	88.699	ENSPVAG00000005977	-	99	88.699	Pteropus_vampyrus
ENSCSAG00000015688	-	91	54.448	ENSPNYG00000014148	smn1	94	55.185	Pundamilia_nyererei
ENSCSAG00000015688	-	91	51.301	ENSPNAG00000014007	smn1	84	49.123	Pygocentrus_nattereri
ENSCSAG00000015688	-	99	81.633	ENSRNOG00000018067	Smn1	96	82.918	Rattus_norvegicus
ENSCSAG00000015688	-	100	98.980	ENSRBIG00000037052	-	100	98.980	Rhinopithecus_bieti
ENSCSAG00000015688	-	95	83.571	ENSRBIG00000036775	-	95	82.500	Rhinopithecus_bieti
ENSCSAG00000015688	-	100	98.980	ENSRROG00000039399	-	100	98.980	Rhinopithecus_roxellana
ENSCSAG00000015688	-	100	81.695	ENSRROG00000031088	-	100	79.661	Rhinopithecus_roxellana
ENSCSAG00000015688	-	100	91.497	ENSSBOG00000011665	-	100	95.604	Saimiri_boliviensis_boliviensis
ENSCSAG00000015688	-	83	84.252	ENSSBOG00000020112	-	87	86.000	Saimiri_boliviensis_boliviensis
ENSCSAG00000015688	-	99	68.942	ENSSHAG00000001499	-	96	70.149	Sarcophilus_harrisii
ENSCSAG00000015688	-	91	51.625	ENSSFOG00015015507	smn1	94	52.347	Scleropages_formosus
ENSCSAG00000015688	-	91	51.095	ENSSMAG00000007922	smn1	94	52.158	Scophthalmus_maximus
ENSCSAG00000015688	-	91	52.297	ENSSDUG00000018533	smn1	94	52.688	Seriola_dumerili
ENSCSAG00000015688	-	91	52.650	ENSSLDG00000021135	smn1	94	53.047	Seriola_lalandi_dorsalis
ENSCSAG00000015688	-	91	63.100	ENSSPUG00000000373	-	93	63.704	Sphenodon_punctatus
ENSCSAG00000015688	-	91	52.518	ENSSPAG00000004345	smn1	94	53.237	Stegastes_partitus
ENSCSAG00000015688	-	99	88.699	ENSSSCG00000016970	-	99	88.699	Sus_scrofa
ENSCSAG00000015688	-	72	58.216	ENSSSCG00000033865	-	92	61.722	Sus_scrofa
ENSCSAG00000015688	-	95	66.429	ENSSSCG00000029127	-	94	66.429	Sus_scrofa
ENSCSAG00000015688	-	94	59.431	ENSTGUG00000001548	-	96	61.278	Taeniopygia_guttata
ENSCSAG00000015688	-	51	59.603	ENSTRUG00000000736	smn	95	48.736	Takifugu_rubripes
ENSCSAG00000015688	-	92	48.043	ENSTNIG00000009892	smn1	95	48.387	Tetraodon_nigroviridis
ENSCSAG00000015688	-	62	87.500	ENSTBEG00000002399	-	89	87.500	Tupaia_belangeri
ENSCSAG00000015688	-	95	83.986	ENSTTRG00000005080	-	95	84.342	Tursiops_truncatus
ENSCSAG00000015688	-	62	88.587	ENSUAMG00000024947	-	67	88.587	Ursus_americanus
ENSCSAG00000015688	-	95	88.968	ENSUMAG00000007842	-	72	88.968	Ursus_maritimus
ENSCSAG00000015688	-	91	75.281	ENSVPAG00000009887	-	96	74.906	Vicugna_pacos
ENSCSAG00000015688	-	95	87.189	ENSVVUG00000006934	-	97	87.189	Vulpes_vulpes
ENSCSAG00000015688	-	90	36.972	ENSXETG00000004912	-	79	61.290	Xenopus_tropicalis
ENSCSAG00000015688	-	92	55.914	ENSXETG00000018189	smn2	95	52.759	Xenopus_tropicalis
ENSCSAG00000015688	-	92	52.920	ENSXMAG00000001521	smn1	95	51.648	Xiphophorus_maculatus