EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAG00000016036 (Gene tree)
Gene ID
103231469
Gene Symbol
PABPN1
Alias
OPMD|PAB2|PABP2
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Chlorocebus_sabaeus
Status
putative
Strand
Plus strand
Length
3475 bases
Position
chr29:23693549-23697023
Accession
103231469
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAP00000012101RRM_1PF00076.221.8e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAT00000014122PABPN1-201942XM_007993280ENSCSAP00000012101306 (aa)XP_007989040A0A0D9RU12
Gene Model
Click here to download ENSCSAG00000016036's gene model file
Pathways
Pathway IDPathway NameSource
csab03015mRNA surveillance pathwayKEGG
csab05164Influenza AKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000016036's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAG00000016036PABPN16347.727ENSCSAG00000002881PABPN1L7346.818
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAG00000016036PABPN16298.413ENSG00000258643BCL2L2-PABPN15798.413Homo_sapiens
ENSCSAG00000016036PABPN110098.366ENSG00000100836PABPN110098.876Homo_sapiens
ENSCSAG00000016036PABPN18669.318ENSAPOG00000016425pabpn18680.583Acanthochromis_polyacanthus
ENSCSAG00000016036PABPN16298.413ENSAMEG00000007048BCL2L2-PABPN110098.413Ailuropoda_melanoleuca
ENSCSAG00000016036PABPN18465.909ENSACIG00000021744pabpn19480.952Amphilophus_citrinellus
ENSCSAG00000016036PABPN18669.318ENSAOCG00000015805pabpn18680.583Amphiprion_ocellaris
ENSCSAG00000016036PABPN18669.318ENSAPEG00000009623pabpn18680.583Amphiprion_percula
ENSCSAG00000016036PABPN18669.697ENSATEG00000020531pabpn18681.068Anabas_testudineus
ENSCSAG00000016036PABPN16687.192ENSACAG00000006185-7486.124Anolis_carolinensis
ENSCSAG00000016036PABPN110089.542ENSANAG00000024513-10089.542Aotus_nancymaae
ENSCSAG00000016036PABPN18465.660ENSACLG00000016374pabpn16679.397Astatotilapia_calliptera
ENSCSAG00000016036PABPN18670.455ENSAMXG00000000452pabpn19482.738Astyanax_mexicanus
ENSCSAG00000016036PABPN16296.859ENSBTAG00000053753-7196.859Bos_taurus
ENSCSAG00000016036PABPN110097.712ENSBTAG00000006884PABPN110097.712Bos_taurus
ENSCSAG00000016036PABPN19273.759ENSBTAG00000050594-7285.784Bos_taurus
ENSCSAG00000016036PABPN15897.191ENSCJAG00000004407-8997.191Callithrix_jacchus
ENSCSAG00000016036PABPN110098.366ENSCJAG00000007960-10098.366Callithrix_jacchus
ENSCSAG00000016036PABPN110095.425ENSCAFG00000011482PABPN110095.425Canis_familiaris
ENSCSAG00000016036PABPN110098.366ENSCAFG00020007298-10098.366Canis_lupus_dingo
ENSCSAG00000016036PABPN110098.366ENSCAFG00020006651-10098.366Canis_lupus_dingo
ENSCSAG00000016036PABPN110098.039ENSCHIG00000012184PABPN110098.039Capra_hircus
ENSCSAG00000016036PABPN16298.413ENSTSYG00000033996BCL2L2-PABPN110098.876Carlito_syrichta
ENSCSAG00000016036PABPN110096.732ENSCPOG00000025574PABPN110096.732Cavia_porcellus
ENSCSAG00000016036PABPN110098.366ENSCCAG00000033954BCL2L2-PABPN110098.366Cebus_capucinus
ENSCSAG00000016036PABPN110098.366ENSCATG00000038536BCL2L2-PABPN110098.366Cercocebus_atys
ENSCSAG00000016036PABPN16779.024ENSCLAG00000012423PABPN16279.024Chinchilla_lanigera
ENSCSAG00000016036PABPN16787.805ENSCHOG00000004798BCL2L2-PABPN18887.805Choloepus_hoffmanni
ENSCSAG00000016036PABPN15591.617ENSCPBG00000026060-9491.617Chrysemys_picta_bellii
ENSCSAG00000016036PABPN16561.194ENSCING00000012468-8463.682Ciona_intestinalis
ENSCSAG00000016036PABPN15860.112ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSCSAG00000016036PABPN16298.413ENSCANG00000009750BCL2L2-PABPN110098.876Colobus_angolensis_palliatus
ENSCSAG00000016036PABPN19681.695ENSCANG00000030980-7482.927Colobus_angolensis_palliatus
ENSCSAG00000016036PABPN110096.078ENSCGRG00001019696Pabpn110098.315Cricetulus_griseus_chok1gshd
ENSCSAG00000016036PABPN15898.315ENSCGRG00000011102Pabpn110098.315Cricetulus_griseus_crigri
ENSCSAG00000016036PABPN18668.939ENSCSEG00000008774pabpn18979.048Cynoglossus_semilaevis
ENSCSAG00000016036PABPN18565.649ENSCVAG00000003152pabpn18679.612Cyprinodon_variegatus
ENSCSAG00000016036PABPN16881.818ENSDARG00000045373pabpn18682.039Danio_rerio
ENSCSAG00000016036PABPN110098.366ENSDNOG00000023682PABPN110098.366Dasypus_novemcinctus
ENSCSAG00000016036PABPN110097.059ENSDORG00000028966-10097.059Dipodomys_ordii
ENSCSAG00000016036PABPN16262.304FBgn0005648Pabp28262.304Drosophila_melanogaster
ENSCSAG00000016036PABPN16377.949ENSEBUG00000002322pabpn18378.351Eptatretus_burgeri
ENSCSAG00000016036PABPN110098.366ENSEASG00005011716PABPN110098.366Equus_asinus_asinus
ENSCSAG00000016036PABPN19998.026ENSECAG00000011652PABPN19998.299Equus_caballus
ENSCSAG00000016036PABPN19389.437ENSEEUG00000012973-7091.707Erinaceus_europaeus
ENSCSAG00000016036PABPN18672.348ENSELUG00000022654pabpn18583.981Esox_lucius
ENSCSAG00000016036PABPN110098.366ENSFCAG00000031922PABPN110098.366Felis_catus
ENSCSAG00000016036PABPN15897.753ENSFDAG00000018381BCL2L2-PABPN110097.753Fukomys_damarensis
ENSCSAG00000016036PABPN18665.152ENSFHEG00000007215pabpn18678.641Fundulus_heteroclitus
ENSCSAG00000016036PABPN18269.170ENSGMOG00000003922pabpn16681.959Gadus_morhua
ENSCSAG00000016036PABPN16388.265ENSGALG00000052930-7972.325Gallus_gallus
ENSCSAG00000016036PABPN16880.476ENSGAFG00000017099pabpn18680.676Gambusia_affinis
ENSCSAG00000016036PABPN18666.667ENSGACG00000002167pabpn18776.606Gasterosteus_aculeatus
ENSCSAG00000016036PABPN110098.366ENSGGOG00000022683-10098.366Gorilla_gorilla
ENSCSAG00000016036PABPN19381.469ENSGGOG00000025919-9884.459Gorilla_gorilla
ENSCSAG00000016036PABPN19276.241ENSGGOG00000039675-7382.143Gorilla_gorilla
ENSCSAG00000016036PABPN18669.697ENSHBUG00000019523pabpn18681.068Haplochromis_burtoni
ENSCSAG00000016036PABPN19273.665ENSHGLG00000018588-6979.902Heterocephalus_glaber_female
ENSCSAG00000016036PABPN110096.732ENSHGLG00000002927-10096.732Heterocephalus_glaber_female
ENSCSAG00000016036PABPN15574.850ENSHGLG00000009842-9374.850Heterocephalus_glaber_female
ENSCSAG00000016036PABPN15898.315ENSHGLG00100006673-10098.315Heterocephalus_glaber_male
ENSCSAG00000016036PABPN19268.571ENSHGLG00100015565-7079.902Heterocephalus_glaber_male
ENSCSAG00000016036PABPN15587.135ENSHGLG00100018935-9487.135Heterocephalus_glaber_male
ENSCSAG00000016036PABPN18666.160ENSHCOG00000004655pabpn18680.097Hippocampus_comes
ENSCSAG00000016036PABPN18670.076ENSIPUG00000008085PABPN18681.553Ictalurus_punctatus
ENSCSAG00000016036PABPN16479.798ENSIPUG00000000180-8679.798Ictalurus_punctatus
ENSCSAG00000016036PABPN15898.876ENSSTOG00000029847BCL2L2-PABPN110098.876Ictidomys_tridecemlineatus
ENSCSAG00000016036PABPN15898.876ENSJJAG00000023507Gm2052110098.876Jaculus_jaculus
ENSCSAG00000016036PABPN18668.561ENSKMAG00000018748pabpn18680.193Kryptolebias_marmoratus
ENSCSAG00000016036PABPN18669.697ENSLBEG00000027266pabpn18681.068Labrus_bergylta
ENSCSAG00000016036PABPN15885.955ENSLACG00000000646pabpn17987.778Latimeria_chalumnae
ENSCSAG00000016036PABPN16863.810ENSLOCG00000004694pabpn1l9564.251Lepisosteus_oculatus
ENSCSAG00000016036PABPN18269.841ENSLOCG00000000796pabpn16982.474Lepisosteus_oculatus
ENSCSAG00000016036PABPN16298.413ENSMFAG00000032183BCL2L2-PABPN110098.876Macaca_fascicularis
ENSCSAG00000016036PABPN19777.926ENSMMUG00000048382-6882.353Macaca_mulatta
ENSCSAG00000016036PABPN16298.413ENSMMUG00000014747BCL2L2-PABPN110098.630Macaca_mulatta
ENSCSAG00000016036PABPN110098.366ENSMNEG00000045065BCL2L2-PABPN110098.366Macaca_nemestrina
ENSCSAG00000016036PABPN17482.051ENSMNEG00000035750-9991.489Macaca_nemestrina
ENSCSAG00000016036PABPN19774.662ENSMLEG00000034623-9989.362Mandrillus_leucophaeus
ENSCSAG00000016036PABPN16298.413ENSMLEG00000043862BCL2L2-PABPN110098.876Mandrillus_leucophaeus
ENSCSAG00000016036PABPN18269.048ENSMAMG00000007979pabpn16880.296Mastacembelus_armatus
ENSCSAG00000016036PABPN18269.048ENSMZEG00005011904pabpn16680.928Maylandia_zebra
ENSCSAG00000016036PABPN19896.013ENSMAUG00000007383Gm205219996.013Mesocricetus_auratus
ENSCSAG00000016036PABPN110098.039ENSMICG00000010002BCL2L2-PABPN110098.039Microcebus_murinus
ENSCSAG00000016036PABPN110095.752ENSMOCG00000018557Gm2052110095.752Microtus_ochrogaster
ENSCSAG00000016036PABPN18670.076ENSMMOG00000005405pabpn18681.553Mola_mola
ENSCSAG00000016036PABPN16895.673ENSMODG00000004535-6695.545Monodelphis_domestica
ENSCSAG00000016036PABPN18269.048ENSMALG00000019612pabpn16780.296Monopterus_albus
ENSCSAG00000016036PABPN16296.296MGP_CAROLIEiJ_G0019276Gm205215796.296Mus_caroli
ENSCSAG00000016036PABPN19292.527MGP_CAROLIEiJ_G0019277Pabpn110096.629Mus_caroli
ENSCSAG00000016036PABPN16296.825ENSMUSG00000092232Gm205215796.825Mus_musculus
ENSCSAG00000016036PABPN19292.883ENSMUSG00000022194Pabpn110097.191Mus_musculus
ENSCSAG00000016036PABPN16296.825MGP_PahariEiJ_G0030294Gm205215796.825Mus_pahari
ENSCSAG00000016036PABPN19292.883MGP_PahariEiJ_G0030295Pabpn110097.619Mus_pahari
ENSCSAG00000016036PABPN19292.883MGP_SPRETEiJ_G0020166Pabpn110097.191Mus_spretus
ENSCSAG00000016036PABPN16296.825MGP_SPRETEiJ_G0020165Gm205215796.825Mus_spretus
ENSCSAG00000016036PABPN15498.795ENSMPUG00000006775-9998.795Mustela_putorius_furo
ENSCSAG00000016036PABPN16296.296ENSMLUG00000003800-10096.296Myotis_lucifugus
ENSCSAG00000016036PABPN19288.028ENSMLUG00000012452-6892.271Myotis_lucifugus
ENSCSAG00000016036PABPN19577.931ENSMLUG00000028677-7593.659Myotis_lucifugus
ENSCSAG00000016036PABPN16298.413ENSNGAG00000019529Gm205215798.413Nannospalax_galili
ENSCSAG00000016036PABPN18269.048ENSNBRG00000023955pabpn19480.952Neolamprologus_brichardi
ENSCSAG00000016036PABPN16998.578ENSNLEG00000015007-7398.537Nomascus_leucogenys
ENSCSAG00000016036PABPN19774.832ENSNLEG00000030598-7680.000Nomascus_leucogenys
ENSCSAG00000016036PABPN15885.955ENSODEG00000011555-8985.629Octodon_degus
ENSCSAG00000016036PABPN19280.783ENSODEG00000003739-7584.615Octodon_degus
ENSCSAG00000016036PABPN110096.732ENSODEG00000002083BCL2L2-PABPN110096.732Octodon_degus
ENSCSAG00000016036PABPN18269.048ENSONIG00000008112pabpn16680.928Oreochromis_niloticus
ENSCSAG00000016036PABPN16996.698ENSOCUG00000016174PABPN17597.073Oryctolagus_cuniculus
ENSCSAG00000016036PABPN18567.050ENSORLG00000027900pabpn18478.431Oryzias_latipes
ENSCSAG00000016036PABPN16182.888ENSORLG00020004681pabpn16780.788Oryzias_latipes_hni
ENSCSAG00000016036PABPN16881.340ENSORLG00015000018pabpn18681.553Oryzias_latipes_hsok
ENSCSAG00000016036PABPN16877.778ENSOMEG00000016618pabpn17277.941Oryzias_melastigma
ENSCSAG00000016036PABPN110098.366ENSOGAG00000008710PABPN110098.366Otolemur_garnettii
ENSCSAG00000016036PABPN16298.413ENSOARG00000019336BCL2L2-PABPN15298.413Ovis_aries
ENSCSAG00000016036PABPN16298.413ENSPPAG00000028984BCL2L2-PABPN19998.795Pan_paniscus
ENSCSAG00000016036PABPN15582.036ENSPPAG00000039421-9382.036Pan_paniscus
ENSCSAG00000016036PABPN110098.366ENSPPRG00000010567PABPN110098.366Panthera_pardus
ENSCSAG00000016036PABPN15898.876ENSPTIG00000001063BCL2L2-PABPN110098.876Panthera_tigris_altaica
ENSCSAG00000016036PABPN19271.277ENSPTRG00000047273-6981.443Pan_troglodytes
ENSCSAG00000016036PABPN110098.366ENSPTRG00000006167BCL2L210098.366Pan_troglodytes
ENSCSAG00000016036PABPN19779.392ENSPANG00000023326-9991.489Papio_anubis
ENSCSAG00000016036PABPN110098.366ENSPANG00000021100BCL2L2-PABPN110098.366Papio_anubis
ENSCSAG00000016036PABPN16284.211ENSPKIG00000008144-6780.788Paramormyrops_kingsleyae
ENSCSAG00000016036PABPN16880.383ENSPKIG00000018052pabpn18681.068Paramormyrops_kingsleyae
ENSCSAG00000016036PABPN16461.616ENSPKIG00000008340pabpn1l9261.616Paramormyrops_kingsleyae
ENSCSAG00000016036PABPN18268.254ENSPMGG00000022027pabpn16980.412Periophthalmus_magnuspinnatus
ENSCSAG00000016036PABPN110096.078ENSPEMG00000008332Gm2052110096.078Peromyscus_maniculatus_bairdii
ENSCSAG00000016036PABPN15476.608ENSPMAG00000006212pabpn18475.369Petromyzon_marinus
ENSCSAG00000016036PABPN16996.209ENSPCIG00000027751-6796.098Phascolarctos_cinereus
ENSCSAG00000016036PABPN16877.143ENSPFOG00000010351pabpn18679.227Poecilia_formosa
ENSCSAG00000016036PABPN18267.717ENSPLAG00000022696pabpn16879.412Poecilia_latipinna
ENSCSAG00000016036PABPN16877.143ENSPMEG00000020856pabpn18679.227Poecilia_mexicana
ENSCSAG00000016036PABPN18265.748ENSPREG00000011278pabpn18679.710Poecilia_reticulata
ENSCSAG00000016036PABPN19692.517ENSPPYG00000005663PABPN19992.517Pongo_abelii
ENSCSAG00000016036PABPN16883.412ENSPCAG00000005902PABPN17283.412Procavia_capensis
ENSCSAG00000016036PABPN110098.039ENSPCOG00000028047BCL2L2-PABPN110098.039Propithecus_coquereli
ENSCSAG00000016036PABPN16994.787ENSPVAG00000005270PABPN16796.078Pteropus_vampyrus
ENSCSAG00000016036PABPN18669.697ENSPNYG00000013182pabpn18681.068Pundamilia_nyererei
ENSCSAG00000016036PABPN18670.833ENSPNAG00000023526pabpn18682.524Pygocentrus_nattereri
ENSCSAG00000016036PABPN16561.000ENSPNAG00000021666pabpn1l9462.687Pygocentrus_nattereri
ENSCSAG00000016036PABPN110095.752ENSRNOG00000042195Pabpn110095.752Rattus_norvegicus
ENSCSAG00000016036PABPN19782.667ENSRBIG00000039547-7584.390Rhinopithecus_bieti
ENSCSAG00000016036PABPN19284.286ENSRBIG00000042811-8585.854Rhinopithecus_bieti
ENSCSAG00000016036PABPN15898.305ENSRBIG00000040762BCL2L2-PABPN15598.305Rhinopithecus_bieti
ENSCSAG00000016036PABPN15898.876ENSRROG00000045535BCL2L2-PABPN110098.876Rhinopithecus_roxellana
ENSCSAG00000016036PABPN19982.623ENSRROG00000040409-7584.878Rhinopithecus_roxellana
ENSCSAG00000016036PABPN19281.071ENSRROG00000036409-8383.588Rhinopithecus_roxellana
ENSCSAG00000016036PABPN16292.079ENSSBOG00000026930BCL2L2-PABPN19998.795Saimiri_boliviensis_boliviensis
ENSCSAG00000016036PABPN18764.906ENSSHAG00000007707-8773.659Sarcophilus_harrisii
ENSCSAG00000016036PABPN17185.780ENSSHAG00000014841-8795.767Sarcophilus_harrisii
ENSCSAG00000016036PABPN18668.939ENSSFOG00015014718pabpn18680.583Scleropages_formosus
ENSCSAG00000016036PABPN16461.224ENSSFOG00015015833pabpn1l8762.371Scleropages_formosus
ENSCSAG00000016036PABPN17176.471ENSSFOG00015012565pabpn19080.097Scleropages_formosus
ENSCSAG00000016036PABPN18669.697ENSSMAG00000020157pabpn18681.068Scophthalmus_maximus
ENSCSAG00000016036PABPN18269.048ENSSDUG00000020582pabpn16780.296Seriola_dumerili
ENSCSAG00000016036PABPN18669.697ENSSLDG00000007118pabpn18681.068Seriola_lalandi_dorsalis
ENSCSAG00000016036PABPN15590.419ENSSPUG00000018308-9490.419Sphenodon_punctatus
ENSCSAG00000016036PABPN18669.697ENSSPAG00000021658pabpn18681.068Stegastes_partitus
ENSCSAG00000016036PABPN15853.977ENSSSCG00000038472-9153.293Sus_scrofa
ENSCSAG00000016036PABPN110098.366ENSSSCG00000002023PABPN110098.366Sus_scrofa
ENSCSAG00000016036PABPN17371.749ENSSSCG00000034805-7667.647Sus_scrofa
ENSCSAG00000016036PABPN18670.076ENSTRUG00000023664pabpn18681.553Takifugu_rubripes
ENSCSAG00000016036PABPN16878.095ENSTNIG00000005369pabpn19378.261Tetraodon_nigroviridis
ENSCSAG00000016036PABPN110097.712ENSUAMG00000024460PABPN110097.712Ursus_americanus
ENSCSAG00000016036PABPN16298.413ENSUMAG00000014288BCL2L2-PABPN15798.413Ursus_maritimus
ENSCSAG00000016036PABPN16298.413ENSVVUG00000019912BCL2L2-PABPN17696.891Vulpes_vulpes
ENSCSAG00000016036PABPN16488.776ENSXETG00000014597pabpn16691.371Xenopus_tropicalis
ENSCSAG00000016036PABPN15767.797ENSXCOG00000005158pabpn18980.263Xiphophorus_couchianus
ENSCSAG00000016036PABPN16878.095ENSXMAG00000006196pabpn18680.193Xiphophorus_maculatus

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