EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000016089 (Gene tree)
Gene ID: 103217085
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 61239 bases
Position: chr10:36845777-36907015
Accession: 103217085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000012161	Rif1_N	PF12231.8	6.3e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000014182	RIF1-201	7911	-	ENSCSAP00000012161	2465 (aa)	XP_007963150	A0A0D9RU72

Gene Model

Click here to download ENSCSAG00000016089's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000016089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000016089	RIF1	100	94.984	ENSG00000080345	RIF1	97	98.660	Homo_sapiens
ENSCSAG00000016089	RIF1	59	44.649	ENSAPOG00000011073	rif1	50	48.324	Acanthochromis_polyacanthus
ENSCSAG00000016089	RIF1	99	80.355	ENSAMEG00000008461	RIF1	100	80.355	Ailuropoda_melanoleuca
ENSCSAG00000016089	RIF1	64	50.547	ENSACIG00000017765	rif1	69	50.547	Amphilophus_citrinellus
ENSCSAG00000016089	RIF1	64	48.651	ENSAOCG00000017231	rif1	64	48.651	Amphiprion_ocellaris
ENSCSAG00000016089	RIF1	71	54.843	ENSAPEG00000013228	rif1	65	54.843	Amphiprion_percula
ENSCSAG00000016089	RIF1	65	48.313	ENSATEG00000022887	rif1	68	48.313	Anabas_testudineus
ENSCSAG00000016089	RIF1	85	66.181	ENSAPLG00000007092	RIF1	92	65.889	Anas_platyrhynchos
ENSCSAG00000016089	RIF1	87	55.616	ENSACAG00000003714	RIF1	91	55.616	Anolis_carolinensis
ENSCSAG00000016089	RIF1	100	90.291	ENSANAG00000024840	RIF1	100	90.291	Aotus_nancymaae
ENSCSAG00000016089	RIF1	59	47.838	ENSAMXG00000010910	rif1	52	51.944	Astyanax_mexicanus
ENSCSAG00000016089	RIF1	94	79.072	ENSBTAG00000021020	RIF1	99	79.072	Bos_taurus
ENSCSAG00000016089	RIF1	100	89.810	ENSCJAG00000003138	RIF1	100	89.810	Callithrix_jacchus
ENSCSAG00000016089	RIF1	100	78.721	ENSCAFG00000005670	RIF1	97	78.721	Canis_familiaris
ENSCSAG00000016089	RIF1	100	78.154	ENSCAFG00020016401	RIF1	100	78.154	Canis_lupus_dingo
ENSCSAG00000016089	RIF1	100	79.291	ENSCHIG00000020327	RIF1	100	79.291	Capra_hircus
ENSCSAG00000016089	RIF1	99	79.952	ENSTSYG00000008861	RIF1	100	79.952	Carlito_syrichta
ENSCSAG00000016089	RIF1	79	86.047	ENSCAPG00000008957	RIF1	96	86.047	Cavia_aperea
ENSCSAG00000016089	RIF1	99	71.066	ENSCPOG00000037898	RIF1	99	71.066	Cavia_porcellus
ENSCSAG00000016089	RIF1	100	89.078	ENSCCAG00000024760	RIF1	100	89.078	Cebus_capucinus
ENSCSAG00000016089	RIF1	100	98.418	ENSCATG00000033353	RIF1	100	98.418	Cercocebus_atys
ENSCSAG00000016089	RIF1	96	74.121	ENSCLAG00000001517	RIF1	99	73.900	Chinchilla_lanigera
ENSCSAG00000016089	RIF1	97	77.826	ENSCHOG00000007187	RIF1	97	77.826	Choloepus_hoffmanni
ENSCSAG00000016089	RIF1	90	72.189	ENSCPBG00000025885	RIF1	96	73.373	Chrysemys_picta_bellii
ENSCSAG00000016089	RIF1	100	95.712	ENSCANG00000028962	RIF1	100	96.997	Colobus_angolensis_palliatus
ENSCSAG00000016089	RIF1	99	70.543	ENSCGRG00001024589	Rif1	100	70.543	Cricetulus_griseus_chok1gshd
ENSCSAG00000016089	RIF1	99	71.510	ENSCGRG00000010713	Rif1	100	71.510	Cricetulus_griseus_crigri
ENSCSAG00000016089	RIF1	51	47.862	ENSCVAG00000022479	rif1	54	47.862	Cyprinodon_variegatus
ENSCSAG00000016089	RIF1	99	77.287	ENSDNOG00000011194	RIF1	97	77.287	Dasypus_novemcinctus
ENSCSAG00000016089	RIF1	92	72.652	ENSETEG00000012421	RIF1	92	72.576	Echinops_telfairi
ENSCSAG00000016089	RIF1	96	87.852	ENSEASG00005023434	RIF1	98	92.079	Equus_asinus_asinus
ENSCSAG00000016089	RIF1	97	90.799	ENSECAG00000012679	RIF1	100	90.799	Equus_caballus
ENSCSAG00000016089	RIF1	65	51.035	ENSELUG00000006826	rif1	58	50.909	Esox_lucius
ENSCSAG00000016089	RIF1	100	79.598	ENSFCAG00000029742	RIF1	100	79.718	Felis_catus
ENSCSAG00000016089	RIF1	77	64.024	ENSFALG00000013874	RIF1	89	64.634	Ficedula_albicollis
ENSCSAG00000016089	RIF1	99	75.242	ENSFDAG00000006538	RIF1	99	75.242	Fukomys_damarensis
ENSCSAG00000016089	RIF1	54	51.261	ENSGMOG00000003517	rif1	81	51.261	Gadus_morhua
ENSCSAG00000016089	RIF1	79	65.000	ENSGALG00000012484	RIF1	91	65.000	Gallus_gallus
ENSCSAG00000016089	RIF1	65	51.057	ENSGAFG00000017196	rif1	75	51.787	Gambusia_affinis
ENSCSAG00000016089	RIF1	59	55.691	ENSGACG00000008579	rif1	66	55.200	Gasterosteus_aculeatus
ENSCSAG00000016089	RIF1	88	71.856	ENSGAGG00000012595	RIF1	97	72.973	Gopherus_agassizii
ENSCSAG00000016089	RIF1	90	98.999	ENSGGOG00000040178	RIF1	96	98.999	Gorilla_gorilla
ENSCSAG00000016089	RIF1	61	55.823	ENSHBUG00000007125	rif1	65	55.823	Haplochromis_burtoni
ENSCSAG00000016089	RIF1	95	75.277	ENSHGLG00100009807	RIF1	99	75.234	Heterocephalus_glaber_male
ENSCSAG00000016089	RIF1	63	48.841	ENSHCOG00000015943	rif1	60	48.732	Hippocampus_comes
ENSCSAG00000016089	RIF1	62	53.032	ENSIPUG00000021703	rif1	63	52.438	Ictalurus_punctatus
ENSCSAG00000016089	RIF1	100	77.675	ENSSTOG00000020712	RIF1	100	77.635	Ictidomys_tridecemlineatus
ENSCSAG00000016089	RIF1	99	69.802	ENSJJAG00000023000	Rif1	100	69.721	Jaculus_jaculus
ENSCSAG00000016089	RIF1	51	49.724	ENSKMAG00000002852	rif1	53	49.724	Kryptolebias_marmoratus
ENSCSAG00000016089	RIF1	62	56.400	ENSLBEG00000023196	rif1	57	56.400	Labrus_bergylta
ENSCSAG00000016089	RIF1	86	56.892	ENSLACG00000005425	RIF1	92	56.892	Latimeria_chalumnae
ENSCSAG00000016089	RIF1	63	54.101	ENSLOCG00000002657	rif1	82	52.244	Lepisosteus_oculatus
ENSCSAG00000016089	RIF1	99	78.194	ENSLAFG00000009796	RIF1	100	78.194	Loxodonta_africana
ENSCSAG00000016089	RIF1	100	98.459	ENSMFAG00000032233	RIF1	100	98.459	Macaca_fascicularis
ENSCSAG00000016089	RIF1	100	98.418	ENSMMUG00000008611	RIF1	100	98.418	Macaca_mulatta
ENSCSAG00000016089	RIF1	100	98.297	ENSMNEG00000031616	RIF1	100	98.297	Macaca_nemestrina
ENSCSAG00000016089	RIF1	100	98.459	ENSMLEG00000042945	RIF1	100	98.459	Mandrillus_leucophaeus
ENSCSAG00000016089	RIF1	75	48.923	ENSMAMG00000001745	rif1	65	49.328	Mastacembelus_armatus
ENSCSAG00000016089	RIF1	64	51.272	ENSMZEG00005020920	rif1	69	51.028	Maylandia_zebra
ENSCSAG00000016089	RIF1	84	61.756	ENSMGAG00000012732	RIF1	91	61.756	Meleagris_gallopavo
ENSCSAG00000016089	RIF1	94	89.972	ENSMAUG00000013158	Rif1	99	89.972	Mesocricetus_auratus
ENSCSAG00000016089	RIF1	100	84.113	ENSMICG00000046127	RIF1	100	84.113	Microcebus_murinus
ENSCSAG00000016089	RIF1	99	70.218	ENSMOCG00000009381	Rif1	100	70.218	Microtus_ochrogaster
ENSCSAG00000016089	RIF1	50	49.721	ENSMMOG00000006519	rif1	51	49.801	Mola_mola
ENSCSAG00000016089	RIF1	100	60.128	ENSMODG00000003703	RIF1	100	60.008	Monodelphis_domestica
ENSCSAG00000016089	RIF1	64	49.437	ENSMALG00000016759	rif1	72	49.518	Monopterus_albus
ENSCSAG00000016089	RIF1	99	69.451	MGP_CAROLIEiJ_G0023555	Rif1	100	69.532	Mus_caroli
ENSCSAG00000016089	RIF1	99	69.976	ENSMUSG00000036202	Rif1	100	70.056	Mus_musculus
ENSCSAG00000016089	RIF1	99	68.483	MGP_PahariEiJ_G0025006	Rif1	100	68.442	Mus_pahari
ENSCSAG00000016089	RIF1	99	69.798	MGP_SPRETEiJ_G0024476	Rif1	100	69.798	Mus_spretus
ENSCSAG00000016089	RIF1	100	79.541	ENSMPUG00000000371	RIF1	100	79.541	Mustela_putorius_furo
ENSCSAG00000016089	RIF1	90	76.916	ENSMLUG00000003376	RIF1	100	76.916	Myotis_lucifugus
ENSCSAG00000016089	RIF1	100	73.234	ENSNGAG00000009268	Rif1	100	73.285	Nannospalax_galili
ENSCSAG00000016089	RIF1	62	50.931	ENSNBRG00000014257	rif1	69	50.157	Neolamprologus_brichardi
ENSCSAG00000016089	RIF1	100	93.191	ENSNLEG00000010955	RIF1	100	93.312	Nomascus_leucogenys
ENSCSAG00000016089	RIF1	80	78.222	ENSMEUG00000007601	-	87	78.222	Notamacropus_eugenii
ENSCSAG00000016089	RIF1	99	72.119	ENSODEG00000003950	RIF1	99	72.482	Octodon_degus
ENSCSAG00000016089	RIF1	65	50.727	ENSONIG00000013657	rif1	60	50.644	Oreochromis_niloticus
ENSCSAG00000016089	RIF1	84	66.788	ENSOANG00000006078	-	86	66.788	Ornithorhynchus_anatinus
ENSCSAG00000016089	RIF1	100	76.815	ENSOCUG00000017435	RIF1	100	76.815	Oryctolagus_cuniculus
ENSCSAG00000016089	RIF1	64	47.850	ENSORLG00020001302	rif1	69	48.317	Oryzias_latipes_hni
ENSCSAG00000016089	RIF1	62	49.150	ENSORLG00015000009	rif1	66	48.089	Oryzias_latipes_hsok
ENSCSAG00000016089	RIF1	62	49.282	ENSOMEG00000021513	rif1	67	48.972	Oryzias_melastigma
ENSCSAG00000016089	RIF1	99	81.129	ENSOGAG00000006141	RIF1	99	81.048	Otolemur_garnettii
ENSCSAG00000016089	RIF1	100	79.331	ENSOARG00000008930	RIF1	100	79.331	Ovis_aries
ENSCSAG00000016089	RIF1	100	94.905	ENSPPAG00000023754	RIF1	100	94.905	Pan_paniscus
ENSCSAG00000016089	RIF1	100	79.566	ENSPPRG00000003618	RIF1	100	79.686	Panthera_pardus
ENSCSAG00000016089	RIF1	100	79.606	ENSPTIG00000020652	RIF1	100	79.726	Panthera_tigris_altaica
ENSCSAG00000016089	RIF1	100	94.986	ENSPTRG00000012534	RIF1	100	94.986	Pan_troglodytes
ENSCSAG00000016089	RIF1	100	98.216	ENSPANG00000008525	RIF1	100	98.216	Papio_anubis
ENSCSAG00000016089	RIF1	63	52.026	ENSPKIG00000004267	rif1	68	52.048	Paramormyrops_kingsleyae
ENSCSAG00000016089	RIF1	66	46.545	ENSPMGG00000016141	rif1	80	46.545	Periophthalmus_magnuspinnatus
ENSCSAG00000016089	RIF1	99	71.979	ENSPEMG00000000446	Rif1	99	71.938	Peromyscus_maniculatus_bairdii
ENSCSAG00000016089	RIF1	99	59.424	ENSPCIG00000009185	RIF1	99	59.832	Phascolarctos_cinereus
ENSCSAG00000016089	RIF1	65	51.647	ENSPFOG00000017804	rif1	70	51.647	Poecilia_formosa
ENSCSAG00000016089	RIF1	59	51.985	ENSPFOG00000000554	-	68	51.893	Poecilia_formosa
ENSCSAG00000016089	RIF1	65	51.694	ENSPLAG00000017945	rif1	72	51.613	Poecilia_latipinna
ENSCSAG00000016089	RIF1	53	50.098	ENSPMEG00000006897	-	66	50.000	Poecilia_mexicana
ENSCSAG00000016089	RIF1	54	64.894	ENSPREG00000018052	rif1	69	54.405	Poecilia_reticulata
ENSCSAG00000016089	RIF1	100	95.065	ENSPPYG00000012846	RIF1	100	95.186	Pongo_abelii
ENSCSAG00000016089	RIF1	83	89.109	ENSPCAG00000009032	RIF1	83	89.109	Procavia_capensis
ENSCSAG00000016089	RIF1	100	84.395	ENSPCOG00000027888	RIF1	100	84.395	Propithecus_coquereli
ENSCSAG00000016089	RIF1	93	89.431	ENSPVAG00000014276	RIF1	95	89.431	Pteropus_vampyrus
ENSCSAG00000016089	RIF1	64	49.483	ENSPNYG00000012940	rif1	68	49.404	Pundamilia_nyererei
ENSCSAG00000016089	RIF1	63	54.194	ENSPNAG00000016685	rif1	64	54.194	Pygocentrus_nattereri
ENSCSAG00000016089	RIF1	99	68.690	ENSRNOG00000054901	Rif1	100	68.690	Rattus_norvegicus
ENSCSAG00000016089	RIF1	100	96.479	ENSRBIG00000003704	RIF1	100	96.479	Rhinopithecus_bieti
ENSCSAG00000016089	RIF1	100	97.612	ENSRROG00000028206	RIF1	100	97.612	Rhinopithecus_roxellana
ENSCSAG00000016089	RIF1	97	96.774	ENSSBOG00000029530	RIF1	100	96.774	Saimiri_boliviensis_boliviensis
ENSCSAG00000016089	RIF1	99	60.136	ENSSHAG00000018552	RIF1	100	59.021	Sarcophilus_harrisii
ENSCSAG00000016089	RIF1	63	53.548	ENSSFOG00015021539	rif1	75	53.349	Scleropages_formosus
ENSCSAG00000016089	RIF1	52	49.245	ENSSMAG00000011704	rif1	67	48.409	Scophthalmus_maximus
ENSCSAG00000016089	RIF1	63	50.883	ENSSDUG00000015632	rif1	72	49.697	Seriola_dumerili
ENSCSAG00000016089	RIF1	54	47.688	ENSSLDG00000019531	rif1	54	47.685	Seriola_lalandi_dorsalis
ENSCSAG00000016089	RIF1	60	83.729	ENSSARG00000007161	-	61	83.729	Sorex_araneus
ENSCSAG00000016089	RIF1	93	70.958	ENSSPUG00000003062	RIF1	99	70.958	Sphenodon_punctatus
ENSCSAG00000016089	RIF1	50	57.377	ENSSPAG00000018359	rif1	75	57.377	Stegastes_partitus
ENSCSAG00000016089	RIF1	100	79.541	ENSSSCG00000016395	RIF1	100	79.541	Sus_scrofa
ENSCSAG00000016089	RIF1	67	49.608	ENSTRUG00000015808	rif1	73	49.020	Takifugu_rubripes
ENSCSAG00000016089	RIF1	70	47.570	ENSTNIG00000011538	rif1	74	47.542	Tetraodon_nigroviridis
ENSCSAG00000016089	RIF1	82	90.506	ENSTBEG00000016082	RIF1	82	90.506	Tupaia_belangeri
ENSCSAG00000016089	RIF1	100	80.338	ENSTTRG00000011190	RIF1	100	80.338	Tursiops_truncatus
ENSCSAG00000016089	RIF1	90	79.483	ENSUAMG00000026385	RIF1	99	79.483	Ursus_americanus
ENSCSAG00000016089	RIF1	100	80.338	ENSUMAG00000000337	RIF1	100	80.338	Ursus_maritimus
ENSCSAG00000016089	RIF1	100	78.226	ENSVPAG00000002162	RIF1	100	78.243	Vicugna_pacos
ENSCSAG00000016089	RIF1	100	78.185	ENSVVUG00000011293	RIF1	100	78.275	Vulpes_vulpes
ENSCSAG00000016089	RIF1	99	44.016	ENSXETG00000004530	rif1	99	44.143	Xenopus_tropicalis
ENSCSAG00000016089	RIF1	65	49.481	ENSXMAG00000000506	rif1	67	49.444	Xiphophorus_maculatus