EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000016251 (Gene tree)
Gene ID: 103219930
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 75192 bases
Position: chr14:21050799-21125990
Accession: 103219930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000012320	RNA_pol_Rpb1_5	PF04998.17	3.7e-104	1	1
ENSCSAP00000012320	RNA_pol_Rpb1_4	PF05000.17	9.8e-26	1	1
ENSCSAP00000012320	RNA_pol_Rpb1_2	PF00623.20	8.1e-71	1	1
ENSCSAP00000012320	RNA_pol_Rpb1_3	PF04983.18	2e-35	1	1
ENSCSAP00000012320	RNA_pol_Rpb1_1	PF04997.12	5.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000014344	POLR1A-201	5263	-	ENSCSAP00000012320	1720 (aa)	XP_007968183	A0A0D9RUN1

Gene Model

Click here to download ENSCSAG00000016251's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000016251's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000016251	POLR1A	71	30.769	ENSCSAG00000011644	-	53	30.769
ENSCSAG00000016251	POLR1A	62	32.871	ENSCSAG00000009292	POLR3A	70	32.871

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000016251	POLR1A	100	97.616	ENSG00000068654	POLR1A	100	97.616	Homo_sapiens
ENSCSAG00000016251	POLR1A	69	67.845	ENSAPOG00000017945	polr1a	99	68.182	Acanthochromis_polyacanthus
ENSCSAG00000016251	POLR1A	100	91.289	ENSAMEG00000005807	POLR1A	100	92.623	Ailuropoda_melanoleuca
ENSCSAG00000016251	POLR1A	100	63.130	ENSACIG00000022147	polr1a	100	62.862	Amphilophus_citrinellus
ENSCSAG00000016251	POLR1A	100	65.767	ENSAOCG00000017336	polr1a	100	68.310	Amphiprion_ocellaris
ENSCSAG00000016251	POLR1A	95	74.306	ENSAPEG00000016105	polr1a	98	74.306	Amphiprion_percula
ENSCSAG00000016251	POLR1A	100	65.973	ENSATEG00000016773	polr1a	100	65.723	Anabas_testudineus
ENSCSAG00000016251	POLR1A	86	73.103	ENSAPLG00000013871	POLR1A	99	72.874	Anas_platyrhynchos
ENSCSAG00000016251	POLR1A	99	69.643	ENSACAG00000012141	POLR1A	99	68.714	Anolis_carolinensis
ENSCSAG00000016251	POLR1A	100	95.116	ENSANAG00000033927	POLR1A	100	94.942	Aotus_nancymaae
ENSCSAG00000016251	POLR1A	100	61.662	ENSACLG00000020541	polr1a	100	61.600	Astatotilapia_calliptera
ENSCSAG00000016251	POLR1A	100	90.354	ENSBTAG00000006481	POLR1A	100	90.354	Bos_taurus
ENSCSAG00000016251	POLR1A	99	38.401	WBGene00012999	rpoa-1	98	38.018	Caenorhabditis_elegans
ENSCSAG00000016251	POLR1A	100	94.826	ENSCJAG00000019547	POLR1A	100	94.826	Callithrix_jacchus
ENSCSAG00000016251	POLR1A	100	90.883	ENSCAFG00000007613	POLR1A	100	90.872	Canis_familiaris
ENSCSAG00000016251	POLR1A	100	90.677	ENSCAFG00020014752	POLR1A	100	90.667	Canis_lupus_dingo
ENSCSAG00000016251	POLR1A	100	88.355	ENSCHIG00000018204	POLR1A	99	89.126	Capra_hircus
ENSCSAG00000016251	POLR1A	100	90.296	ENSTSYG00000002761	POLR1A	100	89.890	Carlito_syrichta
ENSCSAG00000016251	POLR1A	97	84.198	ENSCAPG00000010132	POLR1A	100	83.871	Cavia_aperea
ENSCSAG00000016251	POLR1A	100	88.676	ENSCPOG00000012350	POLR1A	100	88.502	Cavia_porcellus
ENSCSAG00000016251	POLR1A	100	95.407	ENSCCAG00000019839	POLR1A	100	95.407	Cebus_capucinus
ENSCSAG00000016251	POLR1A	100	99.419	ENSCATG00000029786	POLR1A	100	99.419	Cercocebus_atys
ENSCSAG00000016251	POLR1A	100	89.217	ENSCLAG00000005187	POLR1A	100	88.754	Chinchilla_lanigera
ENSCSAG00000016251	POLR1A	99	74.390	ENSCPBG00000001115	POLR1A	99	74.681	Chrysemys_picta_bellii
ENSCSAG00000016251	POLR1A	99	46.838	ENSCSAVG00000007184	-	91	54.591	Ciona_savignyi
ENSCSAG00000016251	POLR1A	100	96.165	ENSCANG00000031785	POLR1A	100	96.165	Colobus_angolensis_palliatus
ENSCSAG00000016251	POLR1A	96	89.507	ENSCGRG00001006651	Polr1a	100	89.507	Cricetulus_griseus_chok1gshd
ENSCSAG00000016251	POLR1A	60	86.320	ENSCGRG00000010834	Polr1a	100	86.750	Cricetulus_griseus_crigri
ENSCSAG00000016251	POLR1A	100	62.065	ENSCSEG00000020190	polr1a	100	62.007	Cynoglossus_semilaevis
ENSCSAG00000016251	POLR1A	100	64.437	ENSCVAG00000020941	polr1a	100	65.122	Cyprinodon_variegatus
ENSCSAG00000016251	POLR1A	100	66.976	ENSDARG00000098375	polr1a	100	67.053	Danio_rerio
ENSCSAG00000016251	POLR1A	100	83.362	ENSDNOG00000010829	POLR1A	100	83.420	Dasypus_novemcinctus
ENSCSAG00000016251	POLR1A	100	87.796	ENSDORG00000008298	Polr1a	100	87.623	Dipodomys_ordii
ENSCSAG00000016251	POLR1A	80	44.269	FBgn0019938	RpI1	99	42.890	Drosophila_melanogaster
ENSCSAG00000016251	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSCSAG00000016251	POLR1A	88	66.667	ENSEBUG00000005667	-	99	66.667	Eptatretus_burgeri
ENSCSAG00000016251	POLR1A	100	92.393	ENSEASG00005001625	POLR1A	100	92.393	Equus_asinus_asinus
ENSCSAG00000016251	POLR1A	100	92.393	ENSECAG00000036306	-	100	93.451	Equus_caballus
ENSCSAG00000016251	POLR1A	100	92.393	ENSECAG00000010092	POLR1A	100	93.451	Equus_caballus
ENSCSAG00000016251	POLR1A	100	92.393	ENSECAG00000030510	-	100	93.451	Equus_caballus
ENSCSAG00000016251	POLR1A	81	94.681	ENSEEUG00000000676	POLR1A	81	94.444	Erinaceus_europaeus
ENSCSAG00000016251	POLR1A	100	67.033	ENSELUG00000012769	polr1a	99	66.975	Esox_lucius
ENSCSAG00000016251	POLR1A	100	91.860	ENSFCAG00000008966	POLR1A	100	91.686	Felis_catus
ENSCSAG00000016251	POLR1A	99	71.144	ENSFALG00000010082	POLR1A	99	71.019	Ficedula_albicollis
ENSCSAG00000016251	POLR1A	100	89.024	ENSFDAG00000013726	POLR1A	100	88.269	Fukomys_damarensis
ENSCSAG00000016251	POLR1A	100	62.101	ENSFHEG00000005996	polr1a	100	61.863	Fundulus_heteroclitus
ENSCSAG00000016251	POLR1A	100	59.965	ENSGMOG00000002230	polr1a	100	59.779	Gadus_morhua
ENSCSAG00000016251	POLR1A	90	69.557	ENSGALG00000038160	-	99	69.107	Gallus_gallus
ENSCSAG00000016251	POLR1A	100	64.638	ENSGAFG00000015266	polr1a	100	65.006	Gambusia_affinis
ENSCSAG00000016251	POLR1A	100	65.110	ENSGACG00000018791	polr1a	100	65.110	Gasterosteus_aculeatus
ENSCSAG00000016251	POLR1A	89	75.130	ENSGAGG00000004984	-	96	80.405	Gopherus_agassizii
ENSCSAG00000016251	POLR1A	100	97.674	ENSGGOG00000001788	POLR1A	100	97.674	Gorilla_gorilla
ENSCSAG00000016251	POLR1A	90	64.257	ENSHBUG00000020021	polr1a	99	64.457	Haplochromis_burtoni
ENSCSAG00000016251	POLR1A	100	89.199	ENSHGLG00000006334	POLR1A	100	89.024	Heterocephalus_glaber_female
ENSCSAG00000016251	POLR1A	100	88.940	ENSHGLG00100006614	POLR1A	100	88.767	Heterocephalus_glaber_male
ENSCSAG00000016251	POLR1A	100	62.033	ENSHCOG00000003345	polr1a	100	61.676	Hippocampus_comes
ENSCSAG00000016251	POLR1A	100	66.165	ENSIPUG00000013174	polr1a	100	65.378	Ictalurus_punctatus
ENSCSAG00000016251	POLR1A	99	87.842	ENSSTOG00000012580	POLR1A	99	88.016	Ictidomys_tridecemlineatus
ENSCSAG00000016251	POLR1A	100	87.594	ENSJJAG00000013113	Polr1a	100	87.420	Jaculus_jaculus
ENSCSAG00000016251	POLR1A	100	66.086	ENSKMAG00000007399	polr1a	100	65.316	Kryptolebias_marmoratus
ENSCSAG00000016251	POLR1A	95	68.417	ENSLBEG00000015401	polr1a	99	68.697	Labrus_bergylta
ENSCSAG00000016251	POLR1A	53	76.279	ENSLACG00000003218	polr1a	100	76.279	Latimeria_chalumnae
ENSCSAG00000016251	POLR1A	100	70.473	ENSLOCG00000010881	polr1a	100	70.473	Lepisosteus_oculatus
ENSCSAG00000016251	POLR1A	100	89.931	ENSLAFG00000014948	POLR1A	100	90.046	Loxodonta_africana
ENSCSAG00000016251	POLR1A	100	99.477	ENSMFAG00000046097	POLR1A	100	99.477	Macaca_fascicularis
ENSCSAG00000016251	POLR1A	100	99.360	ENSMMUG00000015815	POLR1A	100	99.360	Macaca_mulatta
ENSCSAG00000016251	POLR1A	100	99.419	ENSMNEG00000043313	POLR1A	100	99.419	Macaca_nemestrina
ENSCSAG00000016251	POLR1A	100	98.779	ENSMLEG00000042428	POLR1A	100	98.779	Mandrillus_leucophaeus
ENSCSAG00000016251	POLR1A	100	65.916	ENSMAMG00000016565	polr1a	100	66.048	Mastacembelus_armatus
ENSCSAG00000016251	POLR1A	100	65.187	ENSMZEG00005004915	polr1a	100	65.394	Maylandia_zebra
ENSCSAG00000016251	POLR1A	99	69.217	ENSMGAG00000013111	POLR1A	99	68.812	Meleagris_gallopavo
ENSCSAG00000016251	POLR1A	92	87.335	ENSMAUG00000008497	Polr1a	100	87.618	Mesocricetus_auratus
ENSCSAG00000016251	POLR1A	100	92.795	ENSMICG00000000757	POLR1A	100	92.504	Microcebus_murinus
ENSCSAG00000016251	POLR1A	100	87.261	ENSMOCG00000000122	Polr1a	100	87.203	Microtus_ochrogaster
ENSCSAG00000016251	POLR1A	100	65.215	ENSMMOG00000010216	polr1a	100	65.099	Mola_mola
ENSCSAG00000016251	POLR1A	100	75.330	ENSMODG00000009335	POLR1A	100	74.856	Monodelphis_domestica
ENSCSAG00000016251	POLR1A	100	65.933	ENSMALG00000013363	polr1a	100	65.400	Monopterus_albus
ENSCSAG00000016251	POLR1A	100	85.739	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.640	Mus_caroli
ENSCSAG00000016251	POLR1A	100	86.277	ENSMUSG00000049553	Polr1a	100	85.929	Mus_musculus
ENSCSAG00000016251	POLR1A	100	86.740	MGP_PahariEiJ_G0022230	Polr1a	100	86.393	Mus_pahari
ENSCSAG00000016251	POLR1A	100	85.251	MGP_SPRETEiJ_G0029499	Polr1a	100	84.760	Mus_spretus
ENSCSAG00000016251	POLR1A	100	91.105	ENSMPUG00000009135	POLR1A	100	91.047	Mustela_putorius_furo
ENSCSAG00000016251	POLR1A	100	89.994	ENSMLUG00000015723	POLR1A	100	89.647	Myotis_lucifugus
ENSCSAG00000016251	POLR1A	100	87.702	ENSNGAG00000017907	Polr1a	100	88.079	Nannospalax_galili
ENSCSAG00000016251	POLR1A	100	65.303	ENSNBRG00000000519	polr1a	100	65.509	Neolamprologus_brichardi
ENSCSAG00000016251	POLR1A	100	95.486	ENSNLEG00000002264	POLR1A	100	95.486	Nomascus_leucogenys
ENSCSAG00000016251	POLR1A	75	93.701	ENSMEUG00000011665	-	75	93.701	Notamacropus_eugenii
ENSCSAG00000016251	POLR1A	99	83.098	ENSOPRG00000008269	POLR1A	100	83.039	Ochotona_princeps
ENSCSAG00000016251	POLR1A	100	89.605	ENSODEG00000003542	POLR1A	100	89.141	Octodon_degus
ENSCSAG00000016251	POLR1A	100	66.184	ENSONIG00000015895	polr1a	100	66.242	Oreochromis_niloticus
ENSCSAG00000016251	POLR1A	100	91.110	ENSOCUG00000010138	POLR1A	100	91.110	Oryctolagus_cuniculus
ENSCSAG00000016251	POLR1A	100	64.635	ENSORLG00000008753	polr1a	99	64.873	Oryzias_latipes
ENSCSAG00000016251	POLR1A	100	64.062	ENSORLG00020020726	polr1a	99	63.405	Oryzias_latipes_hni
ENSCSAG00000016251	POLR1A	96	75.532	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSCSAG00000016251	POLR1A	100	91.395	ENSOGAG00000004031	POLR1A	100	91.395	Otolemur_garnettii
ENSCSAG00000016251	POLR1A	100	89.785	ENSOARG00000020601	POLR1A	100	89.785	Ovis_aries
ENSCSAG00000016251	POLR1A	100	97.326	ENSPPAG00000042450	POLR1A	100	97.326	Pan_paniscus
ENSCSAG00000016251	POLR1A	100	92.093	ENSPPRG00000006702	POLR1A	100	91.744	Panthera_pardus
ENSCSAG00000016251	POLR1A	100	91.541	ENSPTIG00000018783	POLR1A	100	91.194	Panthera_tigris_altaica
ENSCSAG00000016251	POLR1A	100	97.151	ENSPTRG00000012147	POLR1A	100	97.151	Pan_troglodytes
ENSCSAG00000016251	POLR1A	100	99.302	ENSPANG00000025908	POLR1A	100	99.302	Papio_anubis
ENSCSAG00000016251	POLR1A	94	77.083	ENSPKIG00000005468	polr1a	99	77.083	Paramormyrops_kingsleyae
ENSCSAG00000016251	POLR1A	63	70.690	ENSPSIG00000009321	-	99	71.402	Pelodiscus_sinensis
ENSCSAG00000016251	POLR1A	54	68.449	ENSPMGG00000009718	polr1a	95	68.449	Periophthalmus_magnuspinnatus
ENSCSAG00000016251	POLR1A	100	88.086	ENSPEMG00000022224	Polr1a	100	88.188	Peromyscus_maniculatus_bairdii
ENSCSAG00000016251	POLR1A	95	79.356	ENSPCIG00000004222	POLR1A	99	79.514	Phascolarctos_cinereus
ENSCSAG00000016251	POLR1A	100	65.585	ENSPFOG00000005025	polr1a	100	65.527	Poecilia_formosa
ENSCSAG00000016251	POLR1A	100	65.701	ENSPLAG00000021389	polr1a	100	65.701	Poecilia_latipinna
ENSCSAG00000016251	POLR1A	100	63.789	ENSPMEG00000006463	polr1a	100	64.100	Poecilia_mexicana
ENSCSAG00000016251	POLR1A	100	65.527	ENSPREG00000002389	polr1a	100	65.489	Poecilia_reticulata
ENSCSAG00000016251	POLR1A	100	96.919	ENSPPYG00000012217	POLR1A	100	96.919	Pongo_abelii
ENSCSAG00000016251	POLR1A	88	96.000	ENSPCAG00000011582	POLR1A	88	96.000	Procavia_capensis
ENSCSAG00000016251	POLR1A	100	92.330	ENSPCOG00000026987	POLR1A	100	92.098	Propithecus_coquereli
ENSCSAG00000016251	POLR1A	95	91.912	ENSPVAG00000012674	POLR1A	95	91.166	Pteropus_vampyrus
ENSCSAG00000016251	POLR1A	100	65.187	ENSPNYG00000000026	polr1a	100	65.394	Pundamilia_nyererei
ENSCSAG00000016251	POLR1A	100	67.225	ENSPNAG00000019223	polr1a	99	68.836	Pygocentrus_nattereri
ENSCSAG00000016251	POLR1A	100	88.246	ENSRNOG00000009545	Polr1a	100	87.898	Rattus_norvegicus
ENSCSAG00000016251	POLR1A	100	98.721	ENSRBIG00000028335	POLR1A	100	98.721	Rhinopithecus_bieti
ENSCSAG00000016251	POLR1A	100	98.663	ENSRROG00000031473	POLR1A	100	98.663	Rhinopithecus_roxellana
ENSCSAG00000016251	POLR1A	99	36.954	YOR341W	RPA190	99	36.907	Saccharomyces_cerevisiae
ENSCSAG00000016251	POLR1A	100	94.651	ENSSBOG00000030262	POLR1A	100	94.651	Saimiri_boliviensis_boliviensis
ENSCSAG00000016251	POLR1A	100	73.890	ENSSHAG00000014739	POLR1A	100	73.413	Sarcophilus_harrisii
ENSCSAG00000016251	POLR1A	100	67.746	ENSSFOG00015019716	polr1a	100	66.782	Scleropages_formosus
ENSCSAG00000016251	POLR1A	100	66.435	ENSSMAG00000014342	polr1a	100	65.837	Scophthalmus_maximus
ENSCSAG00000016251	POLR1A	100	66.092	ENSSDUG00000014631	polr1a	100	66.705	Seriola_dumerili
ENSCSAG00000016251	POLR1A	100	64.191	ENSSLDG00000024095	polr1a	100	64.754	Seriola_lalandi_dorsalis
ENSCSAG00000016251	POLR1A	75	97.872	ENSSARG00000003136	-	76	97.872	Sorex_araneus
ENSCSAG00000016251	POLR1A	94	78.974	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSCSAG00000016251	POLR1A	63	72.222	ENSSPAG00000016341	polr1a	94	71.995	Stegastes_partitus
ENSCSAG00000016251	POLR1A	83	91.661	ENSSSCG00000008226	POLR1A	99	91.637	Sus_scrofa
ENSCSAG00000016251	POLR1A	99	70.294	ENSTGUG00000010704	POLR1A	100	70.000	Taeniopygia_guttata
ENSCSAG00000016251	POLR1A	100	64.060	ENSTRUG00000002210	polr1a	99	63.725	Takifugu_rubripes
ENSCSAG00000016251	POLR1A	100	60.437	ENSTNIG00000010116	polr1a	100	60.299	Tetraodon_nigroviridis
ENSCSAG00000016251	POLR1A	74	96.903	ENSTBEG00000008646	POLR1A	70	100.000	Tupaia_belangeri
ENSCSAG00000016251	POLR1A	100	86.643	ENSTTRG00000008597	POLR1A	100	86.237	Tursiops_truncatus
ENSCSAG00000016251	POLR1A	69	91.561	ENSUAMG00000012158	-	94	90.970	Ursus_americanus
ENSCSAG00000016251	POLR1A	100	90.418	ENSUMAG00000006700	POLR1A	100	90.244	Ursus_maritimus
ENSCSAG00000016251	POLR1A	100	90.714	ENSVVUG00000001245	POLR1A	100	90.703	Vulpes_vulpes
ENSCSAG00000016251	POLR1A	100	67.727	ENSXETG00000001952	polr1a	100	69.188	Xenopus_tropicalis
ENSCSAG00000016251	POLR1A	100	65.471	ENSXMAG00000004032	polr1a	100	65.645	Xiphophorus_maculatus