EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000016356 (Gene tree)
Gene ID: 103216982
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 141501 bases
Position: chr10:19793843-19935343
Accession: 103216982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000012420	R3H	PF01424.22	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000014447	R3HDM1-201	5045	-	ENSCSAP00000012420	1134 (aa)	XP_007963010	A0A0D9RUY1

Gene Model

Click here to download ENSCSAG00000016356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000016356's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000016356	R3HDM1	99	47.314	ENSCSAG00000004911	R3HDM2	94	57.421
ENSCSAG00000016356	R3HDM1	68	52.217	ENSCSAG00000009323	ARPP21	92	51.847

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000016356	R3HDM1	100	95.944	ENSG00000048991	R3HDM1	99	98.175	Homo_sapiens
ENSCSAG00000016356	R3HDM1	90	49.084	ENSAPOG00000020850	r3hdm1	97	48.749	Acanthochromis_polyacanthus
ENSCSAG00000016356	R3HDM1	100	91.909	ENSAMEG00000014886	R3HDM1	100	91.060	Ailuropoda_melanoleuca
ENSCSAG00000016356	R3HDM1	89	48.532	ENSAOCG00000005192	r3hdm1	99	48.145	Amphiprion_ocellaris
ENSCSAG00000016356	R3HDM1	89	46.020	ENSAPEG00000016108	r3hdm1	99	45.968	Amphiprion_percula
ENSCSAG00000016356	R3HDM1	89	45.304	ENSATEG00000000232	r3hdm1	99	45.354	Anabas_testudineus
ENSCSAG00000016356	R3HDM1	100	76.626	ENSAPLG00000015231	R3HDM1	100	75.983	Anas_platyrhynchos
ENSCSAG00000016356	R3HDM1	100	78.478	ENSACAG00000001676	R3HDM1	100	79.003	Anolis_carolinensis
ENSCSAG00000016356	R3HDM1	100	95.242	ENSANAG00000035334	R3HDM1	100	95.242	Aotus_nancymaae
ENSCSAG00000016356	R3HDM1	80	47.138	ENSACLG00000027282	r3hdm1	94	46.605	Astatotilapia_calliptera
ENSCSAG00000016356	R3HDM1	61	39.496	ENSAMXG00000020587	arpp21	84	59.514	Astyanax_mexicanus
ENSCSAG00000016356	R3HDM1	93	63.109	ENSAMXG00000003536	r3hdm1	100	63.023	Astyanax_mexicanus
ENSCSAG00000016356	R3HDM1	93	71.942	ENSAMXG00000012861	R3HDM1	100	71.635	Astyanax_mexicanus
ENSCSAG00000016356	R3HDM1	100	93.316	ENSBTAG00000013302	R3HDM1	100	93.931	Bos_taurus
ENSCSAG00000016356	R3HDM1	100	94.974	ENSCJAG00000011718	R3HDM1	100	94.885	Callithrix_jacchus
ENSCSAG00000016356	R3HDM1	100	92.084	ENSCAFG00000005075	R3HDM1	100	91.236	Canis_familiaris
ENSCSAG00000016356	R3HDM1	100	94.899	ENSCAFG00020016119	R3HDM1	100	95.075	Canis_lupus_dingo
ENSCSAG00000016356	R3HDM1	100	93.492	ENSCHIG00000020851	R3HDM1	100	93.755	Capra_hircus
ENSCSAG00000016356	R3HDM1	100	92.186	ENSCPOG00000012784	R3HDM1	100	92.274	Cavia_porcellus
ENSCSAG00000016356	R3HDM1	100	94.709	ENSCCAG00000027199	R3HDM1	100	94.709	Cebus_capucinus
ENSCSAG00000016356	R3HDM1	100	99.383	ENSCATG00000023642	R3HDM1	100	99.383	Cercocebus_atys
ENSCSAG00000016356	R3HDM1	100	90.781	ENSCLAG00000007962	R3HDM1	100	90.694	Chinchilla_lanigera
ENSCSAG00000016356	R3HDM1	88	78.272	ENSCHOG00000013638	R3HDM1	91	76.662	Choloepus_hoffmanni
ENSCSAG00000016356	R3HDM1	92	78.021	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSCSAG00000016356	R3HDM1	100	95.947	ENSCANG00000034748	R3HDM1	100	95.947	Colobus_angolensis_palliatus
ENSCSAG00000016356	R3HDM1	99	90.829	ENSCGRG00001012357	R3hdm1	97	90.917	Cricetulus_griseus_chok1gshd
ENSCSAG00000016356	R3HDM1	100	90.773	ENSCGRG00000012080	R3hdm1	100	90.861	Cricetulus_griseus_crigri
ENSCSAG00000016356	R3HDM1	89	41.835	ENSCSEG00000008944	r3hdm1	99	42.636	Cynoglossus_semilaevis
ENSCSAG00000016356	R3HDM1	89	48.366	ENSCVAG00000007582	r3hdm1	99	47.619	Cyprinodon_variegatus
ENSCSAG00000016356	R3HDM1	65	36.807	ENSDARG00000061081	arpp21	95	34.777	Danio_rerio
ENSCSAG00000016356	R3HDM1	100	87.150	ENSDNOG00000000771	R3HDM1	100	86.574	Dasypus_novemcinctus
ENSCSAG00000016356	R3HDM1	100	80.915	ENSETEG00000013606	R3HDM1	100	80.560	Echinops_telfairi
ENSCSAG00000016356	R3HDM1	100	94.283	ENSEASG00005007392	R3HDM1	100	97.291	Equus_asinus_asinus
ENSCSAG00000016356	R3HDM1	100	94.283	ENSECAG00000019114	R3HDM1	100	97.291	Equus_caballus
ENSCSAG00000016356	R3HDM1	88	86.876	ENSEEUG00000012589	R3HDM1	91	86.876	Erinaceus_europaeus
ENSCSAG00000016356	R3HDM1	86	61.095	ENSELUG00000004909	R3HDM1	99	54.042	Esox_lucius
ENSCSAG00000016356	R3HDM1	93	50.307	ENSELUG00000014413	r3hdm1	96	52.359	Esox_lucius
ENSCSAG00000016356	R3HDM1	100	94.371	ENSFCAG00000027113	R3HDM1	100	97.291	Felis_catus
ENSCSAG00000016356	R3HDM1	75	75.669	ENSFALG00000013731	R3HDM1	93	69.031	Ficedula_albicollis
ENSCSAG00000016356	R3HDM1	100	91.220	ENSFDAG00000016478	R3HDM1	100	91.308	Fukomys_damarensis
ENSCSAG00000016356	R3HDM1	89	48.041	ENSFHEG00000018713	r3hdm1	100	47.520	Fundulus_heteroclitus
ENSCSAG00000016356	R3HDM1	59	69.130	ENSGMOG00000006042	-	74	69.783	Gadus_morhua
ENSCSAG00000016356	R3HDM1	84	85.621	ENSGALG00000012246	R3HDM1	99	85.574	Gallus_gallus
ENSCSAG00000016356	R3HDM1	79	47.407	ENSGAFG00000006203	r3hdm1	94	47.225	Gambusia_affinis
ENSCSAG00000016356	R3HDM1	87	49.051	ENSGACG00000014925	r3hdm1	99	48.711	Gasterosteus_aculeatus
ENSCSAG00000016356	R3HDM1	100	78.265	ENSGAGG00000007840	R3HDM1	96	83.208	Gopherus_agassizii
ENSCSAG00000016356	R3HDM1	100	95.767	ENSGGOG00000008156	R3HDM1	100	95.767	Gorilla_gorilla
ENSCSAG00000016356	R3HDM1	100	91.557	ENSHGLG00000015718	R3HDM1	100	91.733	Heterocephalus_glaber_female
ENSCSAG00000016356	R3HDM1	100	67.106	ENSHGLG00100015374	-	100	70.492	Heterocephalus_glaber_male
ENSCSAG00000016356	R3HDM1	100	91.293	ENSHGLG00100003184	-	100	91.469	Heterocephalus_glaber_male
ENSCSAG00000016356	R3HDM1	80	44.550	ENSHCOG00000013366	r3hdm1	88	59.750	Hippocampus_comes
ENSCSAG00000016356	R3HDM1	82	65.632	ENSIPUG00000001676	R3HDM1	99	65.311	Ictalurus_punctatus
ENSCSAG00000016356	R3HDM1	85	67.372	ENSIPUG00000013629	r3hdm1	95	69.182	Ictalurus_punctatus
ENSCSAG00000016356	R3HDM1	100	94.978	ENSSTOG00000007572	R3HDM1	99	96.679	Ictidomys_tridecemlineatus
ENSCSAG00000016356	R3HDM1	95	73.388	ENSLACG00000005334	R3HDM1	100	73.206	Latimeria_chalumnae
ENSCSAG00000016356	R3HDM1	100	66.122	ENSLOCG00000001641	r3hdm1	100	66.321	Lepisosteus_oculatus
ENSCSAG00000016356	R3HDM1	100	93.492	ENSLAFG00000009065	R3HDM1	100	93.668	Loxodonta_africana
ENSCSAG00000016356	R3HDM1	100	96.649	ENSMFAG00000030331	R3HDM1	100	99.754	Macaca_fascicularis
ENSCSAG00000016356	R3HDM1	100	96.473	ENSMMUG00000009844	R3HDM1	100	96.473	Macaca_mulatta
ENSCSAG00000016356	R3HDM1	100	96.473	ENSMNEG00000027793	R3HDM1	100	99.754	Macaca_nemestrina
ENSCSAG00000016356	R3HDM1	100	96.737	ENSMLEG00000043189	R3HDM1	100	96.737	Mandrillus_leucophaeus
ENSCSAG00000016356	R3HDM1	89	48.479	ENSMAMG00000004532	r3hdm1	99	47.606	Mastacembelus_armatus
ENSCSAG00000016356	R3HDM1	89	47.866	ENSMZEG00005003157	r3hdm1	99	46.924	Maylandia_zebra
ENSCSAG00000016356	R3HDM1	100	75.898	ENSMGAG00000012461	R3HDM1	100	75.284	Meleagris_gallopavo
ENSCSAG00000016356	R3HDM1	100	90.096	ENSMAUG00000010315	R3hdm1	100	91.030	Mesocricetus_auratus
ENSCSAG00000016356	R3HDM1	96	67.739	ENSMICG00000042655	-	100	85.468	Microcebus_murinus
ENSCSAG00000016356	R3HDM1	100	91.220	ENSMICG00000005900	-	100	90.289	Microcebus_murinus
ENSCSAG00000016356	R3HDM1	90	80.418	ENSMODG00000000923	R3HDM1	97	80.608	Monodelphis_domestica
ENSCSAG00000016356	R3HDM1	99	46.109	ENSMALG00000009000	r3hdm1	100	46.225	Monopterus_albus
ENSCSAG00000016356	R3HDM1	100	89.710	MGP_CAROLIEiJ_G0014543	R3hdm1	100	90.033	Mus_caroli
ENSCSAG00000016356	R3HDM1	100	89.710	ENSMUSG00000056211	R3hdm1	100	90.033	Mus_musculus
ENSCSAG00000016356	R3HDM1	100	89.622	MGP_PahariEiJ_G0027779	R3hdm1	100	89.534	Mus_pahari
ENSCSAG00000016356	R3HDM1	100	89.886	MGP_SPRETEiJ_G0015350	R3hdm1	100	90.033	Mus_spretus
ENSCSAG00000016356	R3HDM1	100	91.645	ENSMPUG00000002412	R3HDM1	100	91.243	Mustela_putorius_furo
ENSCSAG00000016356	R3HDM1	100	90.351	ENSMLUG00000013824	R3HDM1	100	89.073	Myotis_lucifugus
ENSCSAG00000016356	R3HDM1	100	95.855	ENSNLEG00000008622	R3HDM1	100	95.855	Nomascus_leucogenys
ENSCSAG00000016356	R3HDM1	90	70.206	ENSMEUG00000011784	R3HDM1	100	69.148	Notamacropus_eugenii
ENSCSAG00000016356	R3HDM1	100	90.941	ENSODEG00000008607	R3HDM1	100	90.765	Octodon_degus
ENSCSAG00000016356	R3HDM1	94	46.867	ENSONIG00000012017	r3hdm1	98	45.881	Oreochromis_niloticus
ENSCSAG00000016356	R3HDM1	100	79.090	ENSOANG00000007987	R3HDM1	100	79.003	Ornithorhynchus_anatinus
ENSCSAG00000016356	R3HDM1	90	89.882	ENSOCUG00000017366	R3HDM1	98	89.086	Oryctolagus_cuniculus
ENSCSAG00000016356	R3HDM1	89	45.880	ENSORLG00000004297	r3hdm1	99	45.787	Oryzias_latipes
ENSCSAG00000016356	R3HDM1	89	45.953	ENSORLG00015017355	r3hdm1	99	45.650	Oryzias_latipes_hsok
ENSCSAG00000016356	R3HDM1	100	90.413	ENSOGAG00000003136	R3HDM1	100	89.317	Otolemur_garnettii
ENSCSAG00000016356	R3HDM1	100	90.150	ENSOARG00000010788	R3HDM1	100	90.853	Ovis_aries
ENSCSAG00000016356	R3HDM1	100	95.599	ENSPPAG00000027858	R3HDM1	100	95.599	Pan_paniscus
ENSCSAG00000016356	R3HDM1	100	91.205	ENSPPRG00000002626	R3HDM1	100	90.447	Panthera_pardus
ENSCSAG00000016356	R3HDM1	100	91.205	ENSPTIG00000016581	R3HDM1	100	90.447	Panthera_tigris_altaica
ENSCSAG00000016356	R3HDM1	100	95.511	ENSPTRG00000012494	R3HDM1	100	95.511	Pan_troglodytes
ENSCSAG00000016356	R3HDM1	100	96.649	ENSPANG00000026448	R3HDM1	100	96.649	Papio_anubis
ENSCSAG00000016356	R3HDM1	84	75.949	ENSPKIG00000004328	r3hdm1	91	76.190	Paramormyrops_kingsleyae
ENSCSAG00000016356	R3HDM1	100	76.140	ENSPSIG00000012915	R3HDM1	100	75.132	Pelodiscus_sinensis
ENSCSAG00000016356	R3HDM1	100	90.941	ENSPEMG00000015187	R3hdm1	100	90.941	Peromyscus_maniculatus_bairdii
ENSCSAG00000016356	R3HDM1	88	42.551	ENSPMAG00000003369	-	98	42.762	Petromyzon_marinus
ENSCSAG00000016356	R3HDM1	100	84.003	ENSPCIG00000002491	R3HDM1	100	89.951	Phascolarctos_cinereus
ENSCSAG00000016356	R3HDM1	89	48.244	ENSPFOG00000015036	r3hdm1	99	47.486	Poecilia_formosa
ENSCSAG00000016356	R3HDM1	80	47.487	ENSPLAG00000018042	r3hdm1	95	47.826	Poecilia_latipinna
ENSCSAG00000016356	R3HDM1	80	47.741	ENSPMEG00000023947	r3hdm1	95	47.466	Poecilia_mexicana
ENSCSAG00000016356	R3HDM1	89	48.193	ENSPREG00000007902	r3hdm1	88	62.470	Poecilia_reticulata
ENSCSAG00000016356	R3HDM1	100	94.449	ENSPPYG00000012815	R3HDM1	100	94.626	Pongo_abelii
ENSCSAG00000016356	R3HDM1	100	79.420	ENSPCAG00000006208	R3HDM1	100	77.729	Procavia_capensis
ENSCSAG00000016356	R3HDM1	100	89.903	ENSPCOG00000012698	R3HDM1	100	88.714	Propithecus_coquereli
ENSCSAG00000016356	R3HDM1	100	83.040	ENSPVAG00000006098	R3HDM1	100	83.216	Pteropus_vampyrus
ENSCSAG00000016356	R3HDM1	68	37.772	ENSPNAG00000004162	arpp21	79	58.400	Pygocentrus_nattereri
ENSCSAG00000016356	R3HDM1	84	76.282	ENSPNAG00000005436	R3HDM1	99	76.206	Pygocentrus_nattereri
ENSCSAG00000016356	R3HDM1	89	70.350	ENSPNAG00000013952	r3hdm1	95	57.422	Pygocentrus_nattereri
ENSCSAG00000016356	R3HDM1	100	89.270	ENSRNOG00000004099	R3hdm1	100	89.270	Rattus_norvegicus
ENSCSAG00000016356	R3HDM1	100	94.894	ENSRBIG00000033317	R3HDM1	100	99.631	Rhinopithecus_bieti
ENSCSAG00000016356	R3HDM1	100	96.035	ENSRROG00000034534	R3HDM1	100	96.035	Rhinopithecus_roxellana
ENSCSAG00000016356	R3HDM1	100	94.621	ENSSBOG00000020389	R3HDM1	100	94.621	Saimiri_boliviensis_boliviensis
ENSCSAG00000016356	R3HDM1	100	81.563	ENSSHAG00000016999	R3HDM1	100	81.738	Sarcophilus_harrisii
ENSCSAG00000016356	R3HDM1	93	70.460	ENSSFOG00015014134	r3hdm1	100	70.388	Scleropages_formosus
ENSCSAG00000016356	R3HDM1	100	54.978	ENSSFOG00015019851	-	99	56.884	Scleropages_formosus
ENSCSAG00000016356	R3HDM1	99	43.609	ENSSMAG00000001669	r3hdm1	99	43.697	Scophthalmus_maximus
ENSCSAG00000016356	R3HDM1	89	46.260	ENSSDUG00000010749	r3hdm1	99	46.759	Seriola_dumerili
ENSCSAG00000016356	R3HDM1	99	46.037	ENSSLDG00000004499	r3hdm1	99	46.154	Seriola_lalandi_dorsalis
ENSCSAG00000016356	R3HDM1	67	82.392	ENSSARG00000000352	-	69	82.392	Sorex_araneus
ENSCSAG00000016356	R3HDM1	100	77.651	ENSSPUG00000004167	R3HDM1	100	77.739	Sphenodon_punctatus
ENSCSAG00000016356	R3HDM1	89	48.011	ENSSPAG00000004648	r3hdm1	99	47.642	Stegastes_partitus
ENSCSAG00000016356	R3HDM1	100	94.723	ENSSSCG00000015692	R3HDM1	100	94.811	Sus_scrofa
ENSCSAG00000016356	R3HDM1	100	71.429	ENSTGUG00000011750	R3HDM1	100	71.203	Taeniopygia_guttata
ENSCSAG00000016356	R3HDM1	80	46.605	ENSTRUG00000011654	r3hdm1	93	46.392	Takifugu_rubripes
ENSCSAG00000016356	R3HDM1	87	44.390	ENSTNIG00000010362	r3hdm1	95	44.694	Tetraodon_nigroviridis
ENSCSAG00000016356	R3HDM1	100	84.345	ENSTTRG00000003935	R3HDM1	100	84.400	Tursiops_truncatus
ENSCSAG00000016356	R3HDM1	71	90.988	ENSUAMG00000024806	R3HDM1	94	95.146	Ursus_americanus
ENSCSAG00000016356	R3HDM1	100	87.071	ENSUMAG00000005552	R3HDM1	100	87.192	Ursus_maritimus
ENSCSAG00000016356	R3HDM1	93	91.228	ENSVPAG00000007333	R3HDM1	93	91.228	Vicugna_pacos
ENSCSAG00000016356	R3HDM1	100	94.630	ENSVVUG00000006457	R3HDM1	100	94.630	Vulpes_vulpes
ENSCSAG00000016356	R3HDM1	90	65.433	ENSXETG00000019330	r3hdm1	100	65.078	Xenopus_tropicalis
ENSCSAG00000016356	R3HDM1	68	48.221	ENSXCOG00000017448	r3hdm1	94	48.157	Xiphophorus_couchianus
ENSCSAG00000016356	R3HDM1	89	47.959	ENSXMAG00000007885	r3hdm1	99	47.570	Xiphophorus_maculatus