EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000016685 (Gene tree)
Gene ID: 103231340
Gene Symbol: -
Alias: -
Full Name: DNA-(apurinic or apyrimidinic site) lyase
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 5987 bases
Position: chr29:20969559-20975545
Accession: 103231340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000012739	Exo_endo_phos	PF03372.23	5.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000014778	-	4966	-	ENSCSAP00000012739	318 (aa)	XP_007988844	A0A0D9RVT5

Gene Model

Click here to download ENSCSAG00000016685's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000016685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000016685	-	100	100.000	ENSCSAG00000016670	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000016685	-	100	98.113	ENSG00000100823	APEX1	100	98.131	Homo_sapiens
ENSCSAG00000016685	-	88	69.534	ENSAPOG00000017002	apex1	95	68.276	Acanthochromis_polyacanthus
ENSCSAG00000016685	-	100	94.969	ENSAMEG00000005418	APEX1	100	94.969	Ailuropoda_melanoleuca
ENSCSAG00000016685	-	87	71.223	ENSACIG00000010653	apex1	97	70.242	Amphilophus_citrinellus
ENSCSAG00000016685	-	88	69.534	ENSAOCG00000009649	apex1	94	68.276	Amphiprion_ocellaris
ENSCSAG00000016685	-	88	69.534	ENSAPEG00000021453	apex1	94	68.276	Amphiprion_percula
ENSCSAG00000016685	-	86	71.168	ENSATEG00000002883	apex1	97	66.772	Anabas_testudineus
ENSCSAG00000016685	-	100	70.186	ENSACAG00000008099	APEX1	100	70.186	Anolis_carolinensis
ENSCSAG00000016685	-	100	97.484	ENSANAG00000030117	APEX1	100	97.484	Aotus_nancymaae
ENSCSAG00000016685	-	86	72.000	ENSACLG00000018441	apex1	99	67.405	Astatotilapia_calliptera
ENSCSAG00000016685	-	100	65.625	ENSAMXG00000034699	apex1	100	65.625	Astyanax_mexicanus
ENSCSAG00000016685	-	100	93.082	ENSBTAG00000002745	APEX1	100	93.082	Bos_taurus
ENSCSAG00000016685	-	80	44.531	WBGene00001372	exo-3	88	44.531	Caenorhabditis_elegans
ENSCSAG00000016685	-	100	97.799	ENSCJAG00000009726	APEX1	100	97.799	Callithrix_jacchus
ENSCSAG00000016685	-	100	94.340	ENSCAFG00000032033	APEX1	100	94.340	Canis_familiaris
ENSCSAG00000016685	-	54	90.116	ENSCAFG00020023002	-	96	90.116	Canis_lupus_dingo
ENSCSAG00000016685	-	100	94.340	ENSCAFG00020014377	-	100	94.340	Canis_lupus_dingo
ENSCSAG00000016685	-	100	92.453	ENSCHIG00000007298	-	100	92.453	Capra_hircus
ENSCSAG00000016685	-	98	74.038	ENSCHIG00000014537	-	99	74.038	Capra_hircus
ENSCSAG00000016685	-	100	94.025	ENSTSYG00000034813	APEX1	100	94.025	Carlito_syrichta
ENSCSAG00000016685	-	85	87.823	ENSCAPG00000016235	APEX1	91	96.610	Cavia_aperea
ENSCSAG00000016685	-	100	93.711	ENSCPOG00000030909	APEX1	100	93.711	Cavia_porcellus
ENSCSAG00000016685	-	100	97.799	ENSCCAG00000033056	-	100	97.799	Cebus_capucinus
ENSCSAG00000016685	-	100	84.591	ENSCCAG00000031931	-	100	84.591	Cebus_capucinus
ENSCSAG00000016685	-	100	99.686	ENSCATG00000015580	APEX1	100	99.686	Cercocebus_atys
ENSCSAG00000016685	-	100	94.654	ENSCLAG00000001002	APEX1	100	94.654	Chinchilla_lanigera
ENSCSAG00000016685	-	100	72.414	ENSCPBG00000009567	APEX1	100	72.414	Chrysemys_picta_bellii
ENSCSAG00000016685	-	91	54.915	ENSCING00000008137	-	94	54.915	Ciona_intestinalis
ENSCSAG00000016685	-	83	52.075	ENSCSAVG00000007144	-	100	52.896	Ciona_savignyi
ENSCSAG00000016685	-	100	99.057	ENSCANG00000030726	APEX1	100	99.057	Colobus_angolensis_palliatus
ENSCSAG00000016685	-	100	91.824	ENSCGRG00001017046	Apex1	100	91.824	Cricetulus_griseus_chok1gshd
ENSCSAG00000016685	-	100	91.824	ENSCGRG00000008984	Apex1	100	91.824	Cricetulus_griseus_crigri
ENSCSAG00000016685	-	99	65.094	ENSCSEG00000017499	apex1	99	65.094	Cynoglossus_semilaevis
ENSCSAG00000016685	-	88	70.968	ENSCVAG00000022075	apex1	99	65.823	Cyprinodon_variegatus
ENSCSAG00000016685	-	100	66.038	ENSDARG00000045843	apex1	100	66.038	Danio_rerio
ENSCSAG00000016685	-	100	88.994	ENSDNOG00000042234	APEX1	95	88.994	Dasypus_novemcinctus
ENSCSAG00000016685	-	100	93.711	ENSDORG00000001616	Apex1	100	93.711	Dipodomys_ordii
ENSCSAG00000016685	-	100	93.082	ENSETEG00000004855	-	100	93.082	Echinops_telfairi
ENSCSAG00000016685	-	75	64.017	ENSEBUG00000000622	-	92	64.017	Eptatretus_burgeri
ENSCSAG00000016685	-	100	95.597	ENSEASG00005017489	APEX1	74	95.597	Equus_asinus_asinus
ENSCSAG00000016685	-	100	95.597	ENSECAG00000022325	APEX1	82	95.597	Equus_caballus
ENSCSAG00000016685	-	91	93.056	ENSEEUG00000012569	APEX1	100	93.056	Erinaceus_europaeus
ENSCSAG00000016685	-	100	65.517	ENSELUG00000021706	apex1	100	65.517	Esox_lucius
ENSCSAG00000016685	-	100	95.597	ENSFCAG00000030869	APEX1	100	95.597	Felis_catus
ENSCSAG00000016685	-	100	92.767	ENSFDAG00000006120	APEX1	100	92.767	Fukomys_damarensis
ENSCSAG00000016685	-	99	67.405	ENSFHEG00000009031	apex1	83	67.405	Fundulus_heteroclitus
ENSCSAG00000016685	-	99	62.579	ENSGMOG00000007943	apex1	99	62.579	Gadus_morhua
ENSCSAG00000016685	-	99	67.089	ENSGAFG00000005311	apex1	99	67.089	Gambusia_affinis
ENSCSAG00000016685	-	99	64.873	ENSGACG00000019497	apex1	99	69.173	Gasterosteus_aculeatus
ENSCSAG00000016685	-	100	71.787	ENSGAGG00000014999	APEX1	100	71.787	Gopherus_agassizii
ENSCSAG00000016685	-	100	98.428	ENSGGOG00000002128	APEX1	100	98.428	Gorilla_gorilla
ENSCSAG00000016685	-	99	66.139	ENSHBUG00000005894	apex1	99	67.405	Haplochromis_burtoni
ENSCSAG00000016685	-	100	93.711	ENSHGLG00000002848	APEX1	100	93.711	Heterocephalus_glaber_female
ENSCSAG00000016685	-	100	93.711	ENSHGLG00100017878	APEX1	100	93.711	Heterocephalus_glaber_male
ENSCSAG00000016685	-	99	65.831	ENSHCOG00000009961	apex1	99	65.831	Hippocampus_comes
ENSCSAG00000016685	-	100	67.085	ENSIPUG00000005799	apex1	100	67.085	Ictalurus_punctatus
ENSCSAG00000016685	-	100	94.025	ENSSTOG00000010096	APEX1	100	94.025	Ictidomys_tridecemlineatus
ENSCSAG00000016685	-	100	83.648	ENSJJAG00000003660	-	100	83.648	Jaculus_jaculus
ENSCSAG00000016685	-	100	93.396	ENSJJAG00000012067	-	100	93.396	Jaculus_jaculus
ENSCSAG00000016685	-	100	79.560	ENSJJAG00000020465	-	96	83.557	Jaculus_jaculus
ENSCSAG00000016685	-	88	71.326	ENSKMAG00000021171	apex1	99	66.139	Kryptolebias_marmoratus
ENSCSAG00000016685	-	88	68.459	ENSLBEG00000010248	apex1	99	64.217	Labrus_bergylta
ENSCSAG00000016685	-	100	66.981	ENSLACG00000008617	APEX1	100	66.981	Latimeria_chalumnae
ENSCSAG00000016685	-	100	66.352	ENSLOCG00000015516	apex1	99	66.352	Lepisosteus_oculatus
ENSCSAG00000016685	-	100	94.025	ENSLAFG00000021872	APEX1	100	94.025	Loxodonta_africana
ENSCSAG00000016685	-	100	99.057	ENSMFAG00000002565	APEX1	100	99.057	Macaca_fascicularis
ENSCSAG00000016685	-	100	99.371	ENSMMUG00000048039	APEX1	100	99.371	Macaca_mulatta
ENSCSAG00000016685	-	100	99.371	ENSMNEG00000036944	APEX1	100	99.371	Macaca_nemestrina
ENSCSAG00000016685	-	100	99.686	ENSMLEG00000042125	APEX1	100	99.686	Mandrillus_leucophaeus
ENSCSAG00000016685	-	88	71.326	ENSMAMG00000023526	apex1	99	66.456	Mastacembelus_armatus
ENSCSAG00000016685	-	86	72.000	ENSMZEG00005014187	apex1	99	67.405	Maylandia_zebra
ENSCSAG00000016685	-	100	92.767	ENSMAUG00000013994	Apex1	100	92.767	Mesocricetus_auratus
ENSCSAG00000016685	-	100	94.969	ENSMICG00000043554	APEX1	100	94.969	Microcebus_murinus
ENSCSAG00000016685	-	100	91.509	ENSMOCG00000013721	Apex1	100	91.509	Microtus_ochrogaster
ENSCSAG00000016685	-	88	67.500	ENSMMOG00000010031	apex1	97	63.009	Mola_mola
ENSCSAG00000016685	-	100	82.812	ENSMODG00000007125	APEX1	100	84.472	Monodelphis_domestica
ENSCSAG00000016685	-	88	64.158	ENSMALG00000011699	apex1	79	62.799	Monopterus_albus
ENSCSAG00000016685	-	99	93.375	MGP_CAROLIEiJ_G0019209	Apex1	99	93.375	Mus_caroli
ENSCSAG00000016685	-	100	94.025	ENSMUSG00000035960	Apex1	100	94.025	Mus_musculus
ENSCSAG00000016685	-	100	94.025	MGP_PahariEiJ_G0030232	Apex1	100	94.025	Mus_pahari
ENSCSAG00000016685	-	100	94.025	MGP_SPRETEiJ_G0020101	Apex1	100	94.025	Mus_spretus
ENSCSAG00000016685	-	100	93.438	ENSMLUG00000028957	APEX1	100	93.438	Myotis_lucifugus
ENSCSAG00000016685	-	100	92.453	ENSNGAG00000002725	-	100	92.453	Nannospalax_galili
ENSCSAG00000016685	-	100	69.497	ENSNGAG00000021748	-	99	69.497	Nannospalax_galili
ENSCSAG00000016685	-	86	72.000	ENSNBRG00000005334	apex1	91	67.405	Neolamprologus_brichardi
ENSCSAG00000016685	-	100	98.113	ENSNLEG00000010839	APEX1	100	98.113	Nomascus_leucogenys
ENSCSAG00000016685	-	100	86.478	ENSMEUG00000014519	APEX1	100	86.478	Notamacropus_eugenii
ENSCSAG00000016685	-	100	92.767	ENSOPRG00000014029	APEX1	100	92.767	Ochotona_princeps
ENSCSAG00000016685	-	97	74.434	ENSODEG00000004777	-	99	74.434	Octodon_degus
ENSCSAG00000016685	-	100	94.025	ENSODEG00000001703	-	100	94.025	Octodon_degus
ENSCSAG00000016685	-	100	71.605	ENSODEG00000006583	-	100	71.605	Octodon_degus
ENSCSAG00000016685	-	87	71.942	ENSONIG00000012089	apex1	99	67.722	Oreochromis_niloticus
ENSCSAG00000016685	-	90	82.807	ENSOANG00000008836	APEX1	80	78.704	Ornithorhynchus_anatinus
ENSCSAG00000016685	-	100	94.340	ENSOCUG00000005022	APEX1	100	94.340	Oryctolagus_cuniculus
ENSCSAG00000016685	-	99	66.667	ENSORLG00000012378	apex1	99	66.667	Oryzias_latipes
ENSCSAG00000016685	-	99	66.667	ENSORLG00020021371	apex1	99	66.667	Oryzias_latipes_hni
ENSCSAG00000016685	-	99	66.667	ENSORLG00015020089	apex1	99	66.667	Oryzias_latipes_hsok
ENSCSAG00000016685	-	99	66.667	ENSOMEG00000018876	apex1	99	66.667	Oryzias_melastigma
ENSCSAG00000016685	-	98	83.654	ENSOGAG00000029355	-	100	83.654	Otolemur_garnettii
ENSCSAG00000016685	-	100	94.340	ENSOGAG00000013335	-	100	94.340	Otolemur_garnettii
ENSCSAG00000016685	-	100	91.509	ENSOARG00000019740	-	100	91.509	Ovis_aries
ENSCSAG00000016685	-	99	77.532	ENSOARG00000014424	-	100	77.532	Ovis_aries
ENSCSAG00000016685	-	97	88.636	ENSOARG00000001876	-	100	88.636	Ovis_aries
ENSCSAG00000016685	-	100	98.428	ENSPPAG00000038760	APEX1	100	98.428	Pan_paniscus
ENSCSAG00000016685	-	100	95.912	ENSPPRG00000011794	APEX1	100	95.912	Panthera_pardus
ENSCSAG00000016685	-	100	95.597	ENSPTIG00000014829	APEX1	100	95.597	Panthera_tigris_altaica
ENSCSAG00000016685	-	100	98.428	ENSPTRG00000006093	APEX1	100	98.428	Pan_troglodytes
ENSCSAG00000016685	-	100	99.686	ENSPANG00000022757	APEX1	100	99.686	Papio_anubis
ENSCSAG00000016685	-	87	68.592	ENSPKIG00000003504	apex1	100	64.798	Paramormyrops_kingsleyae
ENSCSAG00000016685	-	76	66.667	ENSPMGG00000016596	apex1	73	66.667	Periophthalmus_magnuspinnatus
ENSCSAG00000016685	-	100	93.396	ENSPEMG00000019097	Apex1	100	93.396	Peromyscus_maniculatus_bairdii
ENSCSAG00000016685	-	94	66.333	ENSPMAG00000007275	-	99	66.333	Petromyzon_marinus
ENSCSAG00000016685	-	100	83.386	ENSPCIG00000023274	APEX1	100	84.424	Phascolarctos_cinereus
ENSCSAG00000016685	-	88	72.043	ENSPFOG00000004178	apex1	99	67.089	Poecilia_formosa
ENSCSAG00000016685	-	88	71.685	ENSPLAG00000012779	apex1	99	66.772	Poecilia_latipinna
ENSCSAG00000016685	-	88	72.043	ENSPMEG00000019623	apex1	99	67.089	Poecilia_mexicana
ENSCSAG00000016685	-	88	71.326	ENSPREG00000014298	apex1	99	66.456	Poecilia_reticulata
ENSCSAG00000016685	-	100	97.799	ENSPPYG00000005565	APEX1	100	97.799	Pongo_abelii
ENSCSAG00000016685	-	100	92.138	ENSPCAG00000010376	APEX1	100	92.138	Procavia_capensis
ENSCSAG00000016685	-	100	94.969	ENSPCOG00000021564	APEX1	100	94.969	Propithecus_coquereli
ENSCSAG00000016685	-	100	94.688	ENSPVAG00000010736	APEX1	100	94.688	Pteropus_vampyrus
ENSCSAG00000016685	-	86	72.000	ENSPNYG00000023940	apex1	99	67.405	Pundamilia_nyererei
ENSCSAG00000016685	-	93	65.878	ENSPNAG00000020897	apex1	96	65.763	Pygocentrus_nattereri
ENSCSAG00000016685	-	100	93.082	ENSRNOG00000009663	Apex1	100	93.082	Rattus_norvegicus
ENSCSAG00000016685	-	100	99.057	ENSRBIG00000038325	APEX1	99	99.057	Rhinopithecus_bieti
ENSCSAG00000016685	-	100	97.484	ENSSBOG00000018921	-	100	97.484	Saimiri_boliviensis_boliviensis
ENSCSAG00000016685	-	100	82.390	ENSSBOG00000031372	-	100	82.390	Saimiri_boliviensis_boliviensis
ENSCSAG00000016685	-	100	83.025	ENSSHAG00000013524	APEX1	100	84.049	Sarcophilus_harrisii
ENSCSAG00000016685	-	87	66.426	ENSSFOG00015001948	apex1	100	62.579	Scleropages_formosus
ENSCSAG00000016685	-	87	69.424	ENSSMAG00000013348	apex1	99	65.300	Scophthalmus_maximus
ENSCSAG00000016685	-	88	69.534	ENSSDUG00000016377	apex1	99	65.190	Seriola_dumerili
ENSCSAG00000016685	-	88	70.968	ENSSLDG00000023005	apex1	99	66.456	Seriola_lalandi_dorsalis
ENSCSAG00000016685	-	93	71.525	ENSSPUG00000000531	APEX1	99	71.525	Sphenodon_punctatus
ENSCSAG00000016685	-	88	70.251	ENSSPAG00000000458	apex1	96	68.259	Stegastes_partitus
ENSCSAG00000016685	-	100	93.711	ENSSSCG00000040060	-	100	93.711	Sus_scrofa
ENSCSAG00000016685	-	96	56.129	ENSSSCG00000039705	-	99	57.947	Sus_scrofa
ENSCSAG00000016685	-	74	60.169	ENSTGUG00000014378	APEX1	100	60.169	Taeniopygia_guttata
ENSCSAG00000016685	-	87	68.345	ENSTRUG00000004268	apex1	95	64.241	Takifugu_rubripes
ENSCSAG00000016685	-	99	63.291	ENSTNIG00000005778	apex1	99	63.291	Tetraodon_nigroviridis
ENSCSAG00000016685	-	100	91.195	ENSTBEG00000006405	APEX1	100	91.195	Tupaia_belangeri
ENSCSAG00000016685	-	74	94.492	ENSTTRG00000007860	APEX1	100	94.492	Tursiops_truncatus
ENSCSAG00000016685	-	100	94.654	ENSUAMG00000010457	APEX1	100	94.654	Ursus_americanus
ENSCSAG00000016685	-	100	94.654	ENSUMAG00000009178	APEX1	100	94.654	Ursus_maritimus
ENSCSAG00000016685	-	74	89.831	ENSVPAG00000005083	APEX1	100	89.831	Vicugna_pacos
ENSCSAG00000016685	-	100	94.025	ENSVVUG00000009010	APEX1	100	94.025	Vulpes_vulpes
ENSCSAG00000016685	-	100	64.396	ENSXETG00000024773	apex1	100	66.563	Xenopus_tropicalis
ENSCSAG00000016685	-	88	71.685	ENSXCOG00000015233	apex1	99	66.772	Xiphophorus_couchianus
ENSCSAG00000016685	-	88	71.685	ENSXMAG00000006195	apex1	99	66.772	Xiphophorus_maculatus