EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000016742 (Gene tree)
Gene ID: 103248973
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 47844 bases
Position: chr2:211604-259447
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000012758	PRP1_N	PF06424.12	1.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000014797	PRPF6-201	2844	-	ENSCSAP00000012758	947 (aa)	-	A0A0D9RVW9

Gene Model

Click here to download ENSCSAG00000016742's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000016742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000016742	PRPF6	100	94.826	ENSG00000101161	PRPF6	100	94.826	Homo_sapiens
ENSCSAG00000016742	PRPF6	100	87.645	ENSAPOG00000010395	prpf6	96	88.068	Acanthochromis_polyacanthus
ENSCSAG00000016742	PRPF6	100	91.245	ENSAMEG00000001916	PRPF6	99	91.245	Ailuropoda_melanoleuca
ENSCSAG00000016742	PRPF6	100	87.434	ENSACIG00000019862	prpf6	96	87.856	Amphilophus_citrinellus
ENSCSAG00000016742	PRPF6	100	87.540	ENSAOCG00000012988	prpf6	96	87.962	Amphiprion_ocellaris
ENSCSAG00000016742	PRPF6	100	81.098	ENSAPEG00000008301	prpf6	100	81.415	Amphiprion_percula
ENSCSAG00000016742	PRPF6	100	86.906	ENSATEG00000005581	prpf6	96	87.328	Anabas_testudineus
ENSCSAG00000016742	PRPF6	100	92.080	ENSACAG00000006464	PRPF6	95	92.080	Anolis_carolinensis
ENSCSAG00000016742	PRPF6	100	93.981	ENSANAG00000012661	PRPF6	100	93.981	Aotus_nancymaae
ENSCSAG00000016742	PRPF6	100	87.328	ENSACLG00000025875	prpf6	96	87.751	Astatotilapia_calliptera
ENSCSAG00000016742	PRPF6	99	87.738	ENSAMXG00000001929	prpf6	96	88.161	Astyanax_mexicanus
ENSCSAG00000016742	PRPF6	100	92.186	ENSBTAG00000011656	PRPF6	100	92.186	Bos_taurus
ENSCSAG00000016742	PRPF6	100	93.981	ENSCJAG00000010616	PRPF6	100	93.981	Callithrix_jacchus
ENSCSAG00000016742	PRPF6	100	92.503	ENSCAFG00000013165	PRPF6	100	92.503	Canis_familiaris
ENSCSAG00000016742	PRPF6	100	92.503	ENSCAFG00020002050	PRPF6	100	92.503	Canis_lupus_dingo
ENSCSAG00000016742	PRPF6	100	92.186	ENSCHIG00000018187	PRPF6	100	92.186	Capra_hircus
ENSCSAG00000016742	PRPF6	100	93.136	ENSTSYG00000007814	PRPF6	100	93.136	Carlito_syrichta
ENSCSAG00000016742	PRPF6	97	91.549	ENSCAPG00000015077	PRPF6	100	91.116	Cavia_aperea
ENSCSAG00000016742	PRPF6	100	92.925	ENSCPOG00000007518	PRPF6	100	92.925	Cavia_porcellus
ENSCSAG00000016742	PRPF6	100	90.707	ENSCCAG00000024564	PRPF6	100	90.707	Cebus_capucinus
ENSCSAG00000016742	PRPF6	100	94.720	ENSCATG00000037473	PRPF6	100	94.720	Cercocebus_atys
ENSCSAG00000016742	PRPF6	100	88.912	ENSCLAG00000003854	PRPF6	100	88.912	Chinchilla_lanigera
ENSCSAG00000016742	PRPF6	85	72.947	ENSCHOG00000003315	-	100	72.947	Choloepus_hoffmanni
ENSCSAG00000016742	PRPF6	100	91.658	ENSCPBG00000013964	PRPF6	96	92.080	Chrysemys_picta_bellii
ENSCSAG00000016742	PRPF6	99	70.964	ENSCING00000008817	-	99	70.964	Ciona_intestinalis
ENSCSAG00000016742	PRPF6	100	94.720	ENSCANG00000038230	PRPF6	100	94.720	Colobus_angolensis_palliatus
ENSCSAG00000016742	PRPF6	100	93.031	ENSCGRG00001022666	Prpf6	100	93.031	Cricetulus_griseus_chok1gshd
ENSCSAG00000016742	PRPF6	100	82.471	ENSCSEG00000018561	prpf6	100	82.893	Cynoglossus_semilaevis
ENSCSAG00000016742	PRPF6	100	87.684	ENSCVAG00000010550	prpf6	96	88.173	Cyprinodon_variegatus
ENSCSAG00000016742	PRPF6	100	86.800	ENSDARG00000091367	prpf6	99	87.223	Danio_rerio
ENSCSAG00000016742	PRPF6	100	91.658	ENSDNOG00000040544	PRPF6	100	91.658	Dasypus_novemcinctus
ENSCSAG00000016742	PRPF6	91	91.531	ENSDORG00000005406	Prpf6	100	91.531	Dipodomys_ordii
ENSCSAG00000016742	PRPF6	99	69.501	FBgn0036828	CG6841	98	69.926	Drosophila_melanogaster
ENSCSAG00000016742	PRPF6	85	94.444	ENSETEG00000004447	PRPF6	85	94.444	Echinops_telfairi
ENSCSAG00000016742	PRPF6	99	82.755	ENSEBUG00000008835	prpf6	99	82.755	Eptatretus_burgeri
ENSCSAG00000016742	PRPF6	100	92.291	ENSEASG00005023115	PRPF6	100	92.291	Equus_asinus_asinus
ENSCSAG00000016742	PRPF6	100	88.173	ENSECAG00000013983	PRPF6	100	88.173	Equus_caballus
ENSCSAG00000016742	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSCSAG00000016742	PRPF6	100	87.012	ENSELUG00000001945	prpf6	93	87.012	Esox_lucius
ENSCSAG00000016742	PRPF6	100	92.291	ENSFCAG00000001183	PRPF6	100	92.291	Felis_catus
ENSCSAG00000016742	PRPF6	100	92.291	ENSFALG00000010326	-	97	92.291	Ficedula_albicollis
ENSCSAG00000016742	PRPF6	100	84.721	ENSFALG00000006046	-	97	84.721	Ficedula_albicollis
ENSCSAG00000016742	PRPF6	100	91.447	ENSFDAG00000006451	PRPF6	100	92.455	Fukomys_damarensis
ENSCSAG00000016742	PRPF6	100	88.384	ENSFHEG00000000560	prpf6	96	88.384	Fundulus_heteroclitus
ENSCSAG00000016742	PRPF6	100	85.428	ENSGMOG00000015622	prpf6	99	85.428	Gadus_morhua
ENSCSAG00000016742	PRPF6	100	92.291	ENSGALG00000006001	PRPF6	100	92.291	Gallus_gallus
ENSCSAG00000016742	PRPF6	100	82.893	ENSGAFG00000021109	prpf6	96	83.316	Gambusia_affinis
ENSCSAG00000016742	PRPF6	100	86.167	ENSGACG00000002576	prpf6	99	86.167	Gasterosteus_aculeatus
ENSCSAG00000016742	PRPF6	100	91.552	ENSGAGG00000008653	PRPF6	96	91.975	Gopherus_agassizii
ENSCSAG00000016742	PRPF6	100	94.826	ENSGGOG00000016876	PRPF6	100	94.826	Gorilla_gorilla
ENSCSAG00000016742	PRPF6	100	87.328	ENSHBUG00000004496	prpf6	96	87.751	Haplochromis_burtoni
ENSCSAG00000016742	PRPF6	100	92.714	ENSHGLG00000009222	PRPF6	100	92.714	Heterocephalus_glaber_female
ENSCSAG00000016742	PRPF6	97	92.524	ENSHGLG00100016600	PRPF6	100	92.524	Heterocephalus_glaber_male
ENSCSAG00000016742	PRPF6	100	86.061	ENSHCOG00000011513	prpf6	96	86.484	Hippocampus_comes
ENSCSAG00000016742	PRPF6	100	88.173	ENSIPUG00000004912	prpf6	96	88.173	Ictalurus_punctatus
ENSCSAG00000016742	PRPF6	100	90.295	ENSSTOG00000002922	PRPF6	100	89.662	Ictidomys_tridecemlineatus
ENSCSAG00000016742	PRPF6	100	92.925	ENSJJAG00000000836	Prpf6	100	92.925	Jaculus_jaculus
ENSCSAG00000016742	PRPF6	100	87.434	ENSKMAG00000017800	prpf6	96	87.856	Kryptolebias_marmoratus
ENSCSAG00000016742	PRPF6	100	86.800	ENSLBEG00000012582	prpf6	96	86.800	Labrus_bergylta
ENSCSAG00000016742	PRPF6	100	88.912	ENSLOCG00000004827	prpf6	96	87.962	Lepisosteus_oculatus
ENSCSAG00000016742	PRPF6	100	91.869	ENSLAFG00000005272	PRPF6	100	91.869	Loxodonta_africana
ENSCSAG00000016742	PRPF6	100	94.720	ENSMFAG00000037542	PRPF6	100	94.720	Macaca_fascicularis
ENSCSAG00000016742	PRPF6	100	88.080	ENSMMUG00000015558	PRPF6	98	91.252	Macaca_mulatta
ENSCSAG00000016742	PRPF6	100	83.421	ENSMNEG00000045555	PRPF6	100	83.421	Macaca_nemestrina
ENSCSAG00000016742	PRPF6	100	87.540	ENSMAMG00000010718	prpf6	96	87.962	Mastacembelus_armatus
ENSCSAG00000016742	PRPF6	94	86.712	ENSMZEG00005026539	prpf6	100	87.162	Maylandia_zebra
ENSCSAG00000016742	PRPF6	100	86.814	ENSMZEG00005015261	-	99	87.236	Maylandia_zebra
ENSCSAG00000016742	PRPF6	97	92.091	ENSMGAG00000006634	PRPF6	100	92.091	Meleagris_gallopavo
ENSCSAG00000016742	PRPF6	100	93.136	ENSMAUG00000013969	Prpf6	100	93.136	Mesocricetus_auratus
ENSCSAG00000016742	PRPF6	87	91.787	ENSMICG00000017793	PRPF6	98	91.677	Microcebus_murinus
ENSCSAG00000016742	PRPF6	100	93.031	ENSMOCG00000001701	Prpf6	100	93.031	Microtus_ochrogaster
ENSCSAG00000016742	PRPF6	100	86.695	ENSMMOG00000020419	prpf6	100	87.117	Mola_mola
ENSCSAG00000016742	PRPF6	99	92.411	ENSMODG00000017051	PRPF6	99	91.525	Monodelphis_domestica
ENSCSAG00000016742	PRPF6	99	87.300	ENSMALG00000000089	prpf6	100	87.300	Monopterus_albus
ENSCSAG00000016742	PRPF6	100	86.378	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSCSAG00000016742	PRPF6	100	93.136	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSCSAG00000016742	PRPF6	100	93.136	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSCSAG00000016742	PRPF6	100	93.136	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSCSAG00000016742	PRPF6	91	91.479	ENSMPUG00000008673	PRPF6	99	91.479	Mustela_putorius_furo
ENSCSAG00000016742	PRPF6	100	93.031	ENSNGAG00000003365	Prpf6	100	93.031	Nannospalax_galili
ENSCSAG00000016742	PRPF6	100	87.434	ENSNBRG00000015025	prpf6	96	87.856	Neolamprologus_brichardi
ENSCSAG00000016742	PRPF6	100	94.720	ENSNLEG00000010208	PRPF6	100	94.720	Nomascus_leucogenys
ENSCSAG00000016742	PRPF6	100	87.149	ENSMEUG00000009824	-	90	87.352	Notamacropus_eugenii
ENSCSAG00000016742	PRPF6	100	87.540	ENSODEG00000004841	PRPF6	100	87.540	Octodon_degus
ENSCSAG00000016742	PRPF6	100	87.328	ENSONIG00000017406	prpf6	96	87.751	Oreochromis_niloticus
ENSCSAG00000016742	PRPF6	100	92.291	ENSOANG00000004920	PRPF6	100	92.291	Ornithorhynchus_anatinus
ENSCSAG00000016742	PRPF6	99	91.151	ENSOCUG00000014151	PRPF6	100	91.151	Oryctolagus_cuniculus
ENSCSAG00000016742	PRPF6	100	87.434	ENSORLG00000009592	prpf6	96	87.434	Oryzias_latipes
ENSCSAG00000016742	PRPF6	100	87.540	ENSORLG00020001458	prpf6	96	87.540	Oryzias_latipes_hni
ENSCSAG00000016742	PRPF6	100	87.540	ENSORLG00015018762	prpf6	96	87.540	Oryzias_latipes_hsok
ENSCSAG00000016742	PRPF6	100	87.434	ENSOMEG00000012174	prpf6	96	87.856	Oryzias_melastigma
ENSCSAG00000016742	PRPF6	100	85.338	ENSOGAG00000007573	PRPF6	100	85.338	Otolemur_garnettii
ENSCSAG00000016742	PRPF6	100	91.763	ENSOARG00000008776	PRPF6	99	91.763	Ovis_aries
ENSCSAG00000016742	PRPF6	100	94.826	ENSPPAG00000008686	PRPF6	100	94.826	Pan_paniscus
ENSCSAG00000016742	PRPF6	100	92.291	ENSPPRG00000008497	PRPF6	100	92.291	Panthera_pardus
ENSCSAG00000016742	PRPF6	97	92.091	ENSPTIG00000011184	PRPF6	97	92.091	Panthera_tigris_altaica
ENSCSAG00000016742	PRPF6	100	94.826	ENSPTRG00000013765	PRPF6	100	94.826	Pan_troglodytes
ENSCSAG00000016742	PRPF6	100	94.192	ENSPANG00000024135	PRPF6	100	94.192	Papio_anubis
ENSCSAG00000016742	PRPF6	100	88.596	ENSPKIG00000005627	prpf6	99	89.018	Paramormyrops_kingsleyae
ENSCSAG00000016742	PRPF6	94	91.779	ENSPSIG00000007717	PRPF6	100	91.779	Pelodiscus_sinensis
ENSCSAG00000016742	PRPF6	100	85.127	ENSPMGG00000008925	prpf6	96	85.338	Periophthalmus_magnuspinnatus
ENSCSAG00000016742	PRPF6	100	93.031	ENSPEMG00000016036	Prpf6	100	93.031	Peromyscus_maniculatus_bairdii
ENSCSAG00000016742	PRPF6	99	83.983	ENSPMAG00000006144	prpf6	99	83.983	Petromyzon_marinus
ENSCSAG00000016742	PRPF6	100	92.608	ENSPCIG00000017909	PRPF6	100	92.608	Phascolarctos_cinereus
ENSCSAG00000016742	PRPF6	100	87.751	ENSPFOG00000006431	prpf6	96	88.173	Poecilia_formosa
ENSCSAG00000016742	PRPF6	100	87.645	ENSPLAG00000005974	prpf6	96	88.068	Poecilia_latipinna
ENSCSAG00000016742	PRPF6	100	87.856	ENSPMEG00000009977	prpf6	96	88.279	Poecilia_mexicana
ENSCSAG00000016742	PRPF6	100	87.751	ENSPREG00000017993	prpf6	92	88.173	Poecilia_reticulata
ENSCSAG00000016742	PRPF6	100	94.298	ENSPPYG00000011256	PRPF6	100	94.298	Pongo_abelii
ENSCSAG00000016742	PRPF6	95	96.460	ENSPCAG00000006536	PRPF6	88	96.460	Procavia_capensis
ENSCSAG00000016742	PRPF6	100	92.608	ENSPCOG00000016881	PRPF6	100	92.608	Propithecus_coquereli
ENSCSAG00000016742	PRPF6	100	86.378	ENSPVAG00000014316	PRPF6	100	86.378	Pteropus_vampyrus
ENSCSAG00000016742	PRPF6	100	70.992	ENSPNYG00000001939	prpf6	96	76.241	Pundamilia_nyererei
ENSCSAG00000016742	PRPF6	100	87.751	ENSPNAG00000015606	prpf6	96	88.173	Pygocentrus_nattereri
ENSCSAG00000016742	PRPF6	100	93.031	ENSRNOG00000051498	Prpf6	100	93.031	Rattus_norvegicus
ENSCSAG00000016742	PRPF6	100	94.720	ENSRBIG00000043613	PRPF6	100	94.720	Rhinopithecus_bieti
ENSCSAG00000016742	PRPF6	100	91.377	ENSRROG00000040969	PRPF6	100	91.377	Rhinopithecus_roxellana
ENSCSAG00000016742	PRPF6	91	86.515	ENSSBOG00000020632	PRPF6	93	85.274	Saimiri_boliviensis_boliviensis
ENSCSAG00000016742	PRPF6	100	92.608	ENSSHAG00000016810	PRPF6	100	92.608	Sarcophilus_harrisii
ENSCSAG00000016742	PRPF6	99	89.007	ENSSFOG00015020859	prpf6	100	89.434	Scleropages_formosus
ENSCSAG00000016742	PRPF6	100	86.589	ENSSMAG00000008112	prpf6	96	86.589	Scophthalmus_maximus
ENSCSAG00000016742	PRPF6	100	87.223	ENSSDUG00000016142	prpf6	96	87.645	Seriola_dumerili
ENSCSAG00000016742	PRPF6	100	87.223	ENSSLDG00000025283	prpf6	100	84.266	Seriola_lalandi_dorsalis
ENSCSAG00000016742	PRPF6	94	90.878	ENSSPUG00000018260	PRPF6	100	90.878	Sphenodon_punctatus
ENSCSAG00000016742	PRPF6	100	87.223	ENSSPAG00000015850	prpf6	96	87.645	Stegastes_partitus
ENSCSAG00000016742	PRPF6	100	91.975	ENSSSCG00000029119	PRPF6	100	91.441	Sus_scrofa
ENSCSAG00000016742	PRPF6	100	92.397	ENSTGUG00000007221	PRPF6	99	92.397	Taeniopygia_guttata
ENSCSAG00000016742	PRPF6	100	86.378	ENSTRUG00000002920	prpf6	96	86.800	Takifugu_rubripes
ENSCSAG00000016742	PRPF6	100	80.147	ENSTNIG00000017873	prpf6	100	80.567	Tetraodon_nigroviridis
ENSCSAG00000016742	PRPF6	88	79.500	ENSTBEG00000005348	PRPF6	85	79.500	Tupaia_belangeri
ENSCSAG00000016742	PRPF6	100	91.447	ENSTTRG00000013068	PRPF6	100	91.447	Tursiops_truncatus
ENSCSAG00000016742	PRPF6	98	90.821	ENSUMAG00000021631	PRPF6	98	90.821	Ursus_maritimus
ENSCSAG00000016742	PRPF6	100	92.503	ENSVVUG00000014948	PRPF6	100	92.503	Vulpes_vulpes
ENSCSAG00000016742	PRPF6	100	90.074	ENSXETG00000012054	prpf6	97	90.707	Xenopus_tropicalis
ENSCSAG00000016742	PRPF6	100	87.856	ENSXCOG00000008082	prpf6	96	88.279	Xiphophorus_couchianus
ENSCSAG00000016742	PRPF6	100	87.856	ENSXMAG00000015581	prpf6	96	88.279	Xiphophorus_maculatus