EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000017040 (Gene tree)
Gene ID: 103231188
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 106882 bases
Position: chr29:9045373-9152254
Accession: 103231188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000013082	HRDC	PF00570.23	4.1e-12	1	1
ENSCSAP00000013082	BDHCT	PF08072.11	8.4e-21	1	1
ENSCSAP00000013082	DEAD	PF00270.29	8.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000015133	BLM-201	5658	-	ENSCSAP00000013082	1423 (aa)	XP_007988649	A0A0D9RWU3

Gene Model

Click here to download ENSCSAG00000017040's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03440	Homologous recombination	KEGG
csab03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000017040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000017040	BLM	100	95.228	ENSG00000197299	BLM	100	95.228	Homo_sapiens
ENSCSAG00000017040	BLM	55	65.306	ENSAPOG00000017966	blm	58	65.306	Acanthochromis_polyacanthus
ENSCSAG00000017040	BLM	100	81.735	ENSAMEG00000013843	BLM	100	81.316	Ailuropoda_melanoleuca
ENSCSAG00000017040	BLM	55	65.217	ENSACIG00000023762	blm	56	64.962	Amphilophus_citrinellus
ENSCSAG00000017040	BLM	55	65.311	ENSAOCG00000003318	blm	57	65.311	Amphiprion_ocellaris
ENSCSAG00000017040	BLM	55	65.311	ENSAPEG00000018105	blm	56	65.311	Amphiprion_percula
ENSCSAG00000017040	BLM	84	66.540	ENSATEG00000006421	blm	84	66.244	Anabas_testudineus
ENSCSAG00000017040	BLM	81	58.681	ENSAPLG00000006878	BLM	98	58.319	Anas_platyrhynchos
ENSCSAG00000017040	BLM	74	57.846	ENSACAG00000014275	BLM	55	71.465	Anolis_carolinensis
ENSCSAG00000017040	BLM	100	92.140	ENSANAG00000038415	BLM	100	92.138	Aotus_nancymaae
ENSCSAG00000017040	BLM	88	63.002	ENSACLG00000020354	blm	59	62.915	Astatotilapia_calliptera
ENSCSAG00000017040	BLM	71	62.777	ENSAMXG00000016970	blm	75	54.174	Astyanax_mexicanus
ENSCSAG00000017040	BLM	93	83.224	ENSBTAG00000020301	BLM	100	83.224	Bos_taurus
ENSCSAG00000017040	BLM	100	91.719	ENSCJAG00000009803	BLM	100	91.961	Callithrix_jacchus
ENSCSAG00000017040	BLM	100	82.163	ENSCAFG00000012385	BLM	100	82.163	Canis_familiaris
ENSCSAG00000017040	BLM	100	82.022	ENSCAFG00020016111	BLM	94	91.655	Canis_lupus_dingo
ENSCSAG00000017040	BLM	100	81.359	ENSCHIG00000010329	BLM	100	81.908	Capra_hircus
ENSCSAG00000017040	BLM	100	86.335	ENSTSYG00000012368	BLM	100	86.335	Carlito_syrichta
ENSCSAG00000017040	BLM	86	85.384	ENSCAPG00000017976	BLM	99	85.384	Cavia_aperea
ENSCSAG00000017040	BLM	100	77.786	ENSCPOG00000001761	BLM	100	77.715	Cavia_porcellus
ENSCSAG00000017040	BLM	100	91.298	ENSCCAG00000023069	BLM	100	91.343	Cebus_capucinus
ENSCSAG00000017040	BLM	100	98.385	ENSCATG00000040609	BLM	100	98.802	Cercocebus_atys
ENSCSAG00000017040	BLM	100	79.622	ENSCLAG00000012111	BLM	100	79.552	Chinchilla_lanigera
ENSCSAG00000017040	BLM	91	78.105	ENSCHOG00000006255	BLM	93	78.105	Choloepus_hoffmanni
ENSCSAG00000017040	BLM	88	55.267	ENSCPBG00000025000	BLM	98	59.786	Chrysemys_picta_bellii
ENSCSAG00000017040	BLM	88	86.874	ENSCANG00000034808	BLM	100	86.794	Colobus_angolensis_palliatus
ENSCSAG00000017040	BLM	100	78.112	ENSCGRG00001024897	Blm	100	78.252	Cricetulus_griseus_chok1gshd
ENSCSAG00000017040	BLM	67	73.630	ENSCGRG00000016261	Blm	97	73.837	Cricetulus_griseus_crigri
ENSCSAG00000017040	BLM	89	48.250	ENSCSEG00000013483	blm	84	51.165	Cynoglossus_semilaevis
ENSCSAG00000017040	BLM	84	65.613	ENSDARG00000077089	blm	83	65.657	Danio_rerio
ENSCSAG00000017040	BLM	99	80.697	ENSDNOG00000010159	BLM	99	80.557	Dasypus_novemcinctus
ENSCSAG00000017040	BLM	73	80.766	ENSDORG00000011033	Blm	100	80.670	Dipodomys_ordii
ENSCSAG00000017040	BLM	86	65.789	ENSETEG00000015019	BLM	86	65.789	Echinops_telfairi
ENSCSAG00000017040	BLM	100	81.206	ENSEASG00005006727	BLM	100	80.856	Equus_asinus_asinus
ENSCSAG00000017040	BLM	100	83.183	ENSECAG00000011405	BLM	100	82.835	Equus_caballus
ENSCSAG00000017040	BLM	98	74.282	ENSEEUG00000001434	BLM	98	74.282	Erinaceus_europaeus
ENSCSAG00000017040	BLM	88	66.625	ENSELUG00000019098	blm	59	65.704	Esox_lucius
ENSCSAG00000017040	BLM	100	80.659	ENSFCAG00000006087	BLM	100	80.659	Felis_catus
ENSCSAG00000017040	BLM	89	52.422	ENSFALG00000010981	BLM	89	55.749	Ficedula_albicollis
ENSCSAG00000017040	BLM	94	86.604	ENSFDAG00000012658	BLM	98	86.226	Fukomys_damarensis
ENSCSAG00000017040	BLM	65	61.040	ENSFHEG00000002553	blm	60	64.541	Fundulus_heteroclitus
ENSCSAG00000017040	BLM	87	60.048	ENSGMOG00000016431	blm	90	61.224	Gadus_morhua
ENSCSAG00000017040	BLM	99	51.116	ENSGALG00000008256	BLM	99	51.120	Gallus_gallus
ENSCSAG00000017040	BLM	58	65.173	ENSGAFG00000001117	blm	63	65.045	Gambusia_affinis
ENSCSAG00000017040	BLM	88	52.628	ENSGAGG00000005383	BLM	79	78.374	Gopherus_agassizii
ENSCSAG00000017040	BLM	100	95.084	ENSGGOG00000007710	BLM	100	95.084	Gorilla_gorilla
ENSCSAG00000017040	BLM	88	63.239	ENSHBUG00000015943	blm	60	63.152	Haplochromis_burtoni
ENSCSAG00000017040	BLM	100	80.939	ENSHGLG00000013231	BLM	99	80.659	Heterocephalus_glaber_female
ENSCSAG00000017040	BLM	73	55.100	ENSHCOG00000011455	blm	99	54.080	Hippocampus_comes
ENSCSAG00000017040	BLM	73	55.333	ENSIPUG00000000529	blm	68	65.987	Ictalurus_punctatus
ENSCSAG00000017040	BLM	100	81.748	ENSSTOG00000005000	BLM	100	82.168	Ictidomys_tridecemlineatus
ENSCSAG00000017040	BLM	65	87.975	ENSJJAG00000016322	Blm	94	87.816	Jaculus_jaculus
ENSCSAG00000017040	BLM	70	61.599	ENSKMAG00000016608	blm	63	66.497	Kryptolebias_marmoratus
ENSCSAG00000017040	BLM	99	51.497	ENSLACG00000006490	BLM	99	51.839	Latimeria_chalumnae
ENSCSAG00000017040	BLM	88	62.397	ENSLOCG00000014302	blm	86	62.456	Lepisosteus_oculatus
ENSCSAG00000017040	BLM	100	98.315	ENSMFAG00000042982	BLM	100	98.315	Macaca_fascicularis
ENSCSAG00000017040	BLM	100	98.385	ENSMMUG00000019526	BLM	100	98.385	Macaca_mulatta
ENSCSAG00000017040	BLM	99	94.034	ENSMNEG00000031251	BLM	99	94.034	Macaca_nemestrina
ENSCSAG00000017040	BLM	100	95.997	ENSMLEG00000032934	BLM	100	95.997	Mandrillus_leucophaeus
ENSCSAG00000017040	BLM	68	63.048	ENSMAMG00000008726	blm	64	66.415	Mastacembelus_armatus
ENSCSAG00000017040	BLM	71	62.871	ENSMZEG00005022323	blm	64	62.782	Maylandia_zebra
ENSCSAG00000017040	BLM	100	78.267	ENSMAUG00000008953	Blm	99	78.197	Mesocricetus_auratus
ENSCSAG00000017040	BLM	100	86.835	ENSMICG00000034442	BLM	100	86.844	Microcebus_murinus
ENSCSAG00000017040	BLM	100	76.347	ENSMOCG00000016367	Blm	99	75.802	Microtus_ochrogaster
ENSCSAG00000017040	BLM	82	60.465	ENSMMOG00000006959	blm	60	65.262	Mola_mola
ENSCSAG00000017040	BLM	99	64.658	ENSMODG00000019449	BLM	99	64.455	Monodelphis_domestica
ENSCSAG00000017040	BLM	71	63.380	ENSMALG00000007323	blm	70	63.325	Monopterus_albus
ENSCSAG00000017040	BLM	100	74.983	MGP_CAROLIEiJ_G0029907	Blm	100	74.214	Mus_caroli
ENSCSAG00000017040	BLM	100	75.522	ENSMUSG00000030528	Blm	100	74.757	Mus_musculus
ENSCSAG00000017040	BLM	100	75.961	MGP_PahariEiJ_G0013129	Blm	100	75.122	Mus_pahari
ENSCSAG00000017040	BLM	100	75.802	MGP_SPRETEiJ_G0031009	Blm	100	75.035	Mus_spretus
ENSCSAG00000017040	BLM	84	80.890	ENSMPUG00000015657	BLM	99	80.478	Mustela_putorius_furo
ENSCSAG00000017040	BLM	100	79.190	ENSMLUG00000014697	BLM	100	79.679	Myotis_lucifugus
ENSCSAG00000017040	BLM	100	80.084	ENSNGAG00000001275	Blm	100	79.383	Nannospalax_galili
ENSCSAG00000017040	BLM	84	65.944	ENSNBRG00000019702	blm	61	66.071	Neolamprologus_brichardi
ENSCSAG00000017040	BLM	100	93.825	ENSNLEG00000012087	BLM	100	93.825	Nomascus_leucogenys
ENSCSAG00000017040	BLM	99	60.709	ENSMEUG00000007253	BLM	99	60.709	Notamacropus_eugenii
ENSCSAG00000017040	BLM	95	85.892	ENSOPRG00000011667	BLM	95	84.795	Ochotona_princeps
ENSCSAG00000017040	BLM	73	78.215	ENSODEG00000015373	BLM	100	78.215	Octodon_degus
ENSCSAG00000017040	BLM	59	63.046	ENSONIG00000015193	blm	59	62.959	Oreochromis_niloticus
ENSCSAG00000017040	BLM	54	82.422	ENSOANG00000009316	-	99	81.534	Ornithorhynchus_anatinus
ENSCSAG00000017040	BLM	99	74.651	ENSOCUG00000013969	BLM	99	74.372	Oryctolagus_cuniculus
ENSCSAG00000017040	BLM	64	66.497	ENSORLG00000008110	blm	64	66.284	Oryzias_latipes
ENSCSAG00000017040	BLM	84	66.496	ENSORLG00020004812	blm	64	66.156	Oryzias_latipes_hni
ENSCSAG00000017040	BLM	64	66.752	ENSORLG00015018640	blm	78	66.368	Oryzias_latipes_hsok
ENSCSAG00000017040	BLM	55	65.773	ENSOMEG00000023545	blm	57	65.645	Oryzias_melastigma
ENSCSAG00000017040	BLM	100	79.622	ENSOGAG00000005708	BLM	100	79.412	Otolemur_garnettii
ENSCSAG00000017040	BLM	100	80.347	ENSOARG00000012875	BLM	100	80.278	Ovis_aries
ENSCSAG00000017040	BLM	100	95.298	ENSPPAG00000032173	BLM	100	95.368	Pan_paniscus
ENSCSAG00000017040	BLM	100	80.729	ENSPPRG00000002471	BLM	100	80.729	Panthera_pardus
ENSCSAG00000017040	BLM	100	80.406	ENSPTIG00000016168	BLM	100	80.406	Panthera_tigris_altaica
ENSCSAG00000017040	BLM	100	94.877	ENSPTRG00000007460	BLM	100	94.947	Pan_troglodytes
ENSCSAG00000017040	BLM	100	98.736	ENSPANG00000018572	BLM	100	99.401	Papio_anubis
ENSCSAG00000017040	BLM	88	63.270	ENSPKIG00000008954	blm	86	63.507	Paramormyrops_kingsleyae
ENSCSAG00000017040	BLM	51	67.123	ENSPMGG00000006629	blm	80	67.123	Periophthalmus_magnuspinnatus
ENSCSAG00000017040	BLM	100	76.713	ENSPEMG00000017348	Blm	100	76.434	Peromyscus_maniculatus_bairdii
ENSCSAG00000017040	BLM	50	59.301	ENSPMAG00000000445	blm	96	59.441	Petromyzon_marinus
ENSCSAG00000017040	BLM	99	63.797	ENSPCIG00000006609	BLM	99	63.729	Phascolarctos_cinereus
ENSCSAG00000017040	BLM	61	65.429	ENSPFOG00000005059	blm	78	51.486	Poecilia_formosa
ENSCSAG00000017040	BLM	61	65.173	ENSPLAG00000017344	blm	59	65.045	Poecilia_latipinna
ENSCSAG00000017040	BLM	61	65.429	ENSPMEG00000000321	blm	59	65.301	Poecilia_mexicana
ENSCSAG00000017040	BLM	55	65.173	ENSPREG00000007715	blm	56	65.045	Poecilia_reticulata
ENSCSAG00000017040	BLM	100	93.123	ENSPPYG00000006784	BLM	100	93.123	Pongo_abelii
ENSCSAG00000017040	BLM	73	93.939	ENSPCAG00000008960	BLM	73	93.939	Procavia_capensis
ENSCSAG00000017040	BLM	100	81.723	ENSPCOG00000000439	BLM	100	84.431	Propithecus_coquereli
ENSCSAG00000017040	BLM	80	95.527	ENSPVAG00000011642	BLM	83	95.527	Pteropus_vampyrus
ENSCSAG00000017040	BLM	59	51.412	ENSPNYG00000010956	blm	57	50.816	Pundamilia_nyererei
ENSCSAG00000017040	BLM	73	55.535	ENSPNAG00000011714	blm	79	53.112	Pygocentrus_nattereri
ENSCSAG00000017040	BLM	100	74.668	ENSRNOG00000011213	Blm	100	73.968	Rattus_norvegicus
ENSCSAG00000017040	BLM	100	94.382	ENSRBIG00000029656	BLM	100	98.081	Rhinopithecus_bieti
ENSCSAG00000017040	BLM	100	96.840	ENSRROG00000037871	BLM	100	97.605	Rhinopithecus_roxellana
ENSCSAG00000017040	BLM	91	91.961	ENSSBOG00000030957	BLM	100	91.961	Saimiri_boliviensis_boliviensis
ENSCSAG00000017040	BLM	99	64.177	ENSSHAG00000007988	BLM	99	64.315	Sarcophilus_harrisii
ENSCSAG00000017040	BLM	54	65.223	ENSSFOG00015015462	blm	63	64.872	Scleropages_formosus
ENSCSAG00000017040	BLM	68	65.438	ENSSMAG00000001120	blm	68	65.179	Scophthalmus_maximus
ENSCSAG00000017040	BLM	55	65.820	ENSSDUG00000010955	blm	84	49.757	Seriola_dumerili
ENSCSAG00000017040	BLM	83	50.244	ENSSLDG00000000634	blm	84	49.838	Seriola_lalandi_dorsalis
ENSCSAG00000017040	BLM	90	76.937	ENSSARG00000006398	BLM	95	76.937	Sorex_araneus
ENSCSAG00000017040	BLM	74	59.734	ENSSPUG00000000013	BLM	95	56.863	Sphenodon_punctatus
ENSCSAG00000017040	BLM	100	81.515	ENSSSCG00000001816	BLM	99	82.332	Sus_scrofa
ENSCSAG00000017040	BLM	79	51.638	ENSTGUG00000009959	-	99	51.079	Taeniopygia_guttata
ENSCSAG00000017040	BLM	63	64.459	ENSTRUG00000019860	blm	67	60.993	Takifugu_rubripes
ENSCSAG00000017040	BLM	76	64.968	ENSTNIG00000019246	blm	70	64.295	Tetraodon_nigroviridis
ENSCSAG00000017040	BLM	79	84.121	ENSTBEG00000006706	BLM	81	84.121	Tupaia_belangeri
ENSCSAG00000017040	BLM	100	83.193	ENSTTRG00000016386	BLM	100	83.683	Tursiops_truncatus
ENSCSAG00000017040	BLM	100	81.710	ENSUMAG00000009105	BLM	97	92.339	Ursus_maritimus
ENSCSAG00000017040	BLM	99	80.308	ENSVPAG00000000085	BLM	99	80.238	Vicugna_pacos
ENSCSAG00000017040	BLM	96	89.286	ENSVVUG00000006402	BLM	100	89.286	Vulpes_vulpes
ENSCSAG00000017040	BLM	99	51.085	ENSXETG00000007847	blm	54	72.237	Xenopus_tropicalis
ENSCSAG00000017040	BLM	55	61.509	ENSXCOG00000020227	blm	55	61.381	Xiphophorus_couchianus
ENSCSAG00000017040	BLM	55	64.789	ENSXMAG00000002951	blm	56	64.533	Xiphophorus_maculatus