EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000017060 (Gene tree)
Gene ID: 103246183
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 15102 bases
Position: chr27:9873138-9888239
Accession: 103246183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000013101	RRM_1	PF00076.22	3e-38	1	3
ENSCSAP00000013101	RRM_1	PF00076.22	3e-38	2	3
ENSCSAP00000013101	RRM_1	PF00076.22	3e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000015153	RBM47-201	4414	XM_008017583	ENSCSAP00000013101	593 (aa)	XP_008015772	A0A0D9RWW2

Gene Model

Click here to download ENSCSAG00000017060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000017060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000017060	RBM47	51	74.333	ENSCSAG00000003263	RBM46	56	74.333
ENSCSAG00000017060	RBM47	51	55.049	ENSCSAG00000017365	SYNCRIP	79	46.292
ENSCSAG00000017060	RBM47	72	58.681	ENSCSAG00000007032	A1CF	74	58.628

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000017060	RBM47	100	99.831	ENSG00000163694	RBM47	100	100.000	Homo_sapiens
ENSCSAG00000017060	RBM47	100	77.667	ENSAPOG00000011062	rbm47	93	84.746	Acanthochromis_polyacanthus
ENSCSAG00000017060	RBM47	100	96.477	ENSAMEG00000009672	RBM47	100	96.477	Ailuropoda_melanoleuca
ENSCSAG00000017060	RBM47	100	77.167	ENSACIG00000011531	rbm47	100	75.418	Amphilophus_citrinellus
ENSCSAG00000017060	RBM47	100	77.963	ENSAOCG00000022245	rbm47	93	84.746	Amphiprion_ocellaris
ENSCSAG00000017060	RBM47	100	77.796	ENSAPEG00000018304	rbm47	93	84.746	Amphiprion_percula
ENSCSAG00000017060	RBM47	100	77.199	ENSATEG00000018400	rbm47	94	77.163	Anabas_testudineus
ENSCSAG00000017060	RBM47	100	88.591	ENSAPLG00000013974	RBM47	100	87.584	Anas_platyrhynchos
ENSCSAG00000017060	RBM47	100	86.167	ENSACAG00000011833	RBM47	100	85.667	Anolis_carolinensis
ENSCSAG00000017060	RBM47	100	98.651	ENSANAG00000029440	RBM47	100	98.651	Aotus_nancymaae
ENSCSAG00000017060	RBM47	100	76.432	ENSACLG00000016902	rbm47	94	85.311	Astatotilapia_calliptera
ENSCSAG00000017060	RBM47	100	75.367	ENSAMXG00000021794	rbm47	95	77.108	Astyanax_mexicanus
ENSCSAG00000017060	RBM47	100	96.975	ENSBTAG00000002356	RBM47	100	96.975	Bos_taurus
ENSCSAG00000017060	RBM47	100	98.485	ENSCJAG00000019385	RBM47	100	98.485	Callithrix_jacchus
ENSCSAG00000017060	RBM47	96	93.182	ENSCAFG00000015898	RBM47	100	93.456	Canis_familiaris
ENSCSAG00000017060	RBM47	83	94.118	ENSCAFG00020010558	RBM47	94	94.695	Canis_lupus_dingo
ENSCSAG00000017060	RBM47	100	97.311	ENSCHIG00000026214	RBM47	100	97.311	Capra_hircus
ENSCSAG00000017060	RBM47	86	80.550	ENSTSYG00000033612	RBM47	93	89.823	Carlito_syrichta
ENSCSAG00000017060	RBM47	100	87.731	ENSCAPG00000008426	RBM47	100	87.731	Cavia_aperea
ENSCSAG00000017060	RBM47	100	94.286	ENSCPOG00000014100	RBM47	100	94.286	Cavia_porcellus
ENSCSAG00000017060	RBM47	99	68.289	ENSCCAG00000024397	-	99	66.779	Cebus_capucinus
ENSCSAG00000017060	RBM47	100	98.485	ENSCCAG00000030129	-	100	98.485	Cebus_capucinus
ENSCSAG00000017060	RBM47	100	100.000	ENSCATG00000042064	RBM47	100	100.000	Cercocebus_atys
ENSCSAG00000017060	RBM47	100	93.782	ENSCLAG00000001684	RBM47	100	95.570	Chinchilla_lanigera
ENSCSAG00000017060	RBM47	100	79.461	ENSCHOG00000011731	RBM47	88	93.671	Choloepus_hoffmanni
ENSCSAG00000017060	RBM47	100	90.000	ENSCPBG00000013831	RBM47	100	89.500	Chrysemys_picta_bellii
ENSCSAG00000017060	RBM47	100	99.831	ENSCANG00000019997	RBM47	100	99.831	Colobus_angolensis_palliatus
ENSCSAG00000017060	RBM47	100	92.953	ENSCGRG00001000623	-	100	92.953	Cricetulus_griseus_chok1gshd
ENSCSAG00000017060	RBM47	100	65.886	ENSCGRG00001020102	-	100	71.644	Cricetulus_griseus_chok1gshd
ENSCSAG00000017060	RBM47	100	65.552	ENSCGRG00000014760	-	100	71.309	Cricetulus_griseus_crigri
ENSCSAG00000017060	RBM47	100	92.114	ENSCGRG00000007762	-	100	94.937	Cricetulus_griseus_crigri
ENSCSAG00000017060	RBM47	100	74.917	ENSCSEG00000004545	rbm47	100	73.000	Cynoglossus_semilaevis
ENSCSAG00000017060	RBM47	100	75.960	ENSCVAG00000020144	rbm47	93	84.986	Cyprinodon_variegatus
ENSCSAG00000017060	RBM47	100	76.268	ENSDARG00000061985	rbm47	95	77.855	Danio_rerio
ENSCSAG00000017060	RBM47	100	94.958	ENSDNOG00000046854	RBM47	100	94.958	Dasypus_novemcinctus
ENSCSAG00000017060	RBM47	100	94.147	ENSDORG00000010144	Rbm47	100	93.980	Dipodomys_ordii
ENSCSAG00000017060	RBM47	100	93.478	ENSETEG00000009194	RBM47	100	93.645	Echinops_telfairi
ENSCSAG00000017060	RBM47	99	56.931	ENSEBUG00000011912	rbm47	95	59.445	Eptatretus_burgeri
ENSCSAG00000017060	RBM47	100	97.143	ENSEASG00005008443	RBM47	100	97.143	Equus_asinus_asinus
ENSCSAG00000017060	RBM47	100	97.143	ENSECAG00000004400	RBM47	100	97.143	Equus_caballus
ENSCSAG00000017060	RBM47	76	96.537	ENSEEUG00000001194	RBM47	75	96.537	Erinaceus_europaeus
ENSCSAG00000017060	RBM47	99	74.709	ENSELUG00000006148	rbm47	93	85.237	Esox_lucius
ENSCSAG00000017060	RBM47	100	96.801	ENSFCAG00000012399	RBM47	100	96.801	Felis_catus
ENSCSAG00000017060	RBM47	100	90.117	ENSFALG00000002861	RBM47	100	90.620	Ficedula_albicollis
ENSCSAG00000017060	RBM47	100	93.277	ENSFDAG00000016326	RBM47	100	92.941	Fukomys_damarensis
ENSCSAG00000017060	RBM47	100	77.000	ENSFHEG00000007938	rbm47	100	74.080	Fundulus_heteroclitus
ENSCSAG00000017060	RBM47	100	74.351	ENSGMOG00000014802	rbm47	94	76.256	Gadus_morhua
ENSCSAG00000017060	RBM47	63	92.553	ENSGALG00000014267	RBM47	100	92.042	Gallus_gallus
ENSCSAG00000017060	RBM47	63	83.511	ENSGAFG00000020571	rbm47	98	80.533	Gambusia_affinis
ENSCSAG00000017060	RBM47	100	74.104	ENSGACG00000016223	rbm47	93	83.898	Gasterosteus_aculeatus
ENSCSAG00000017060	RBM47	100	90.167	ENSGAGG00000020051	RBM47	100	89.667	Gopherus_agassizii
ENSCSAG00000017060	RBM47	100	100.000	ENSGGOG00000001367	RBM47	100	100.000	Gorilla_gorilla
ENSCSAG00000017060	RBM47	100	76.634	ENSHBUG00000003520	rbm47	94	85.311	Haplochromis_burtoni
ENSCSAG00000017060	RBM47	84	85.039	ENSHGLG00000016914	RBM47	100	96.203	Heterocephalus_glaber_female
ENSCSAG00000017060	RBM47	100	93.266	ENSHGLG00100014028	-	100	96.203	Heterocephalus_glaber_male
ENSCSAG00000017060	RBM47	100	83.838	ENSHGLG00100003071	-	100	83.670	Heterocephalus_glaber_male
ENSCSAG00000017060	RBM47	99	76.628	ENSHCOG00000002074	rbm47	93	85.876	Hippocampus_comes
ENSCSAG00000017060	RBM47	100	77.554	ENSIPUG00000004743	rbm47	97	78.534	Ictalurus_punctatus
ENSCSAG00000017060	RBM47	100	96.807	ENSSTOG00000004727	RBM47	100	96.807	Ictidomys_tridecemlineatus
ENSCSAG00000017060	RBM47	100	93.792	ENSJJAG00000013823	Rbm47	100	94.799	Jaculus_jaculus
ENSCSAG00000017060	RBM47	100	78.073	ENSKMAG00000000084	rbm47	93	84.831	Kryptolebias_marmoratus
ENSCSAG00000017060	RBM47	100	76.833	ENSLBEG00000008436	rbm47	93	83.898	Labrus_bergylta
ENSCSAG00000017060	RBM47	100	85.260	ENSLACG00000007196	RBM47	100	84.422	Latimeria_chalumnae
ENSCSAG00000017060	RBM47	100	82.077	ENSLOCG00000012966	rbm47	95	80.402	Lepisosteus_oculatus
ENSCSAG00000017060	RBM47	100	94.790	ENSLAFG00000011998	RBM47	100	94.622	Loxodonta_africana
ENSCSAG00000017060	RBM47	100	100.000	ENSMFAG00000037967	RBM47	100	100.000	Macaca_fascicularis
ENSCSAG00000017060	RBM47	100	100.000	ENSMMUG00000012036	RBM47	100	100.000	Macaca_mulatta
ENSCSAG00000017060	RBM47	100	99.831	ENSMNEG00000040774	RBM47	100	99.831	Macaca_nemestrina
ENSCSAG00000017060	RBM47	100	100.000	ENSMLEG00000041432	RBM47	100	100.000	Mandrillus_leucophaeus
ENSCSAG00000017060	RBM47	100	76.672	ENSMAMG00000019143	rbm47	94	81.551	Mastacembelus_armatus
ENSCSAG00000017060	RBM47	100	76.432	ENSMZEG00005023659	rbm47	95	77.682	Maylandia_zebra
ENSCSAG00000017060	RBM47	100	91.000	ENSMGAG00000012226	RBM47	100	90.333	Meleagris_gallopavo
ENSCSAG00000017060	RBM47	100	93.456	ENSMAUG00000006493	Rbm47	100	94.937	Mesocricetus_auratus
ENSCSAG00000017060	RBM47	100	89.713	ENSMICG00000026417	RBM47	100	91.231	Microcebus_murinus
ENSCSAG00000017060	RBM47	100	93.782	ENSMOCG00000021170	Rbm47	100	95.570	Microtus_ochrogaster
ENSCSAG00000017060	RBM47	100	76.961	ENSMMOG00000007260	rbm47	95	77.720	Mola_mola
ENSCSAG00000017060	RBM47	52	82.637	ENSMODG00000015426	-	97	80.064	Monodelphis_domestica
ENSCSAG00000017060	RBM47	100	91.414	ENSMODG00000007003	RBM47	100	91.246	Monodelphis_domestica
ENSCSAG00000017060	RBM47	100	80.776	ENSMODG00000020561	-	100	80.607	Monodelphis_domestica
ENSCSAG00000017060	RBM47	100	77.205	ENSMALG00000005167	rbm47	94	84.746	Monopterus_albus
ENSCSAG00000017060	RBM47	100	93.445	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.671	Mus_caroli
ENSCSAG00000017060	RBM47	100	93.782	ENSMUSG00000070780	Rbm47	100	93.782	Mus_musculus
ENSCSAG00000017060	RBM47	100	93.782	MGP_PahariEiJ_G0017040	Rbm47	100	94.304	Mus_pahari
ENSCSAG00000017060	RBM47	100	93.277	MGP_SPRETEiJ_G0028253	Rbm47	100	93.671	Mus_spretus
ENSCSAG00000017060	RBM47	100	97.475	ENSMPUG00000006177	RBM47	94	97.475	Mustela_putorius_furo
ENSCSAG00000017060	RBM47	100	93.121	ENSMLUG00000000889	RBM47	100	92.282	Myotis_lucifugus
ENSCSAG00000017060	RBM47	100	94.118	ENSNGAG00000003325	Rbm47	100	94.286	Nannospalax_galili
ENSCSAG00000017060	RBM47	100	76.759	ENSNBRG00000015092	rbm47	95	78.028	Neolamprologus_brichardi
ENSCSAG00000017060	RBM47	100	99.663	ENSNLEG00000017151	RBM47	100	99.663	Nomascus_leucogenys
ENSCSAG00000017060	RBM47	72	87.119	ENSMEUG00000009516	-	99	87.264	Notamacropus_eugenii
ENSCSAG00000017060	RBM47	75	97.083	ENSOPRG00000016507	-	75	97.083	Ochotona_princeps
ENSCSAG00000017060	RBM47	100	94.286	ENSODEG00000004873	RBM47	100	94.790	Octodon_degus
ENSCSAG00000017060	RBM47	100	75.733	ENSONIG00000009061	rbm47	94	76.471	Oreochromis_niloticus
ENSCSAG00000017060	RBM47	100	86.190	ENSOANG00000008978	RBM47	100	87.188	Ornithorhynchus_anatinus
ENSCSAG00000017060	RBM47	100	95.294	ENSOCUG00000012034	RBM47	100	95.126	Oryctolagus_cuniculus
ENSCSAG00000017060	RBM47	100	77.333	ENSORLG00000005847	rbm47	94	84.225	Oryzias_latipes
ENSCSAG00000017060	RBM47	100	77.500	ENSORLG00020005154	rbm47	94	84.225	Oryzias_latipes_hni
ENSCSAG00000017060	RBM47	100	77.833	ENSORLG00015000066	rbm47	94	84.507	Oryzias_latipes_hsok
ENSCSAG00000017060	RBM47	100	78.500	ENSOMEG00000010730	rbm47	100	75.418	Oryzias_melastigma
ENSCSAG00000017060	RBM47	100	97.475	ENSOGAG00000029367	-	100	97.475	Otolemur_garnettii
ENSCSAG00000017060	RBM47	100	87.205	ENSOGAG00000025193	-	100	87.205	Otolemur_garnettii
ENSCSAG00000017060	RBM47	100	89.112	ENSOARG00000012711	RBM47	100	89.112	Ovis_aries
ENSCSAG00000017060	RBM47	100	99.831	ENSPPAG00000029763	RBM47	100	99.831	Pan_paniscus
ENSCSAG00000017060	RBM47	100	93.603	ENSPPRG00000012873	RBM47	100	93.603	Panthera_pardus
ENSCSAG00000017060	RBM47	85	91.089	ENSPTIG00000017046	RBM47	100	89.505	Panthera_tigris_altaica
ENSCSAG00000017060	RBM47	100	100.000	ENSPTRG00000016006	RBM47	100	100.000	Pan_troglodytes
ENSCSAG00000017060	RBM47	100	100.000	ENSPANG00000005980	RBM47	100	100.000	Papio_anubis
ENSCSAG00000017060	RBM47	96	77.391	ENSPKIG00000005037	rbm47	95	76.522	Paramormyrops_kingsleyae
ENSCSAG00000017060	RBM47	88	83.690	ENSPKIG00000013431	RBM47	92	86.119	Paramormyrops_kingsleyae
ENSCSAG00000017060	RBM47	89	90.789	ENSPSIG00000017516	RBM47	97	90.226	Pelodiscus_sinensis
ENSCSAG00000017060	RBM47	100	75.251	ENSPMGG00000018540	rbm47	100	74.415	Periophthalmus_magnuspinnatus
ENSCSAG00000017060	RBM47	100	94.118	ENSPEMG00000011088	Rbm47	100	94.454	Peromyscus_maniculatus_bairdii
ENSCSAG00000017060	RBM47	96	80.138	ENSPFOG00000007997	rbm47	94	77.470	Poecilia_formosa
ENSCSAG00000017060	RBM47	96	79.793	ENSPLAG00000002072	rbm47	100	80.481	Poecilia_latipinna
ENSCSAG00000017060	RBM47	100	78.833	ENSPMEG00000017492	rbm47	93	84.136	Poecilia_mexicana
ENSCSAG00000017060	RBM47	96	80.138	ENSPREG00000008456	rbm47	100	80.749	Poecilia_reticulata
ENSCSAG00000017060	RBM47	98	85.932	ENSPPYG00000014688	RBM47	98	84.682	Pongo_abelii
ENSCSAG00000017060	RBM47	81	97.500	ENSPCAG00000011879	RBM47	81	97.500	Procavia_capensis
ENSCSAG00000017060	RBM47	100	92.761	ENSPCOG00000023451	RBM47	100	93.266	Propithecus_coquereli
ENSCSAG00000017060	RBM47	100	95.805	ENSPVAG00000003812	RBM47	100	95.805	Pteropus_vampyrus
ENSCSAG00000017060	RBM47	100	76.509	ENSPNYG00000022868	rbm47	95	77.586	Pundamilia_nyererei
ENSCSAG00000017060	RBM47	100	75.856	ENSPNAG00000007940	rbm47	95	77.797	Pygocentrus_nattereri
ENSCSAG00000017060	RBM47	100	93.782	ENSRNOG00000002408	Rbm47	100	93.782	Rattus_norvegicus
ENSCSAG00000017060	RBM47	100	99.831	ENSRBIG00000039601	RBM47	100	99.831	Rhinopithecus_bieti
ENSCSAG00000017060	RBM47	100	99.831	ENSRROG00000044696	RBM47	100	99.831	Rhinopithecus_roxellana
ENSCSAG00000017060	RBM47	100	93.929	ENSSBOG00000028475	RBM47	100	98.551	Saimiri_boliviensis_boliviensis
ENSCSAG00000017060	RBM47	100	91.919	ENSSHAG00000017576	RBM47	100	91.582	Sarcophilus_harrisii
ENSCSAG00000017060	RBM47	100	73.191	ENSSFOG00015012445	rbm47	94	74.087	Scleropages_formosus
ENSCSAG00000017060	RBM47	100	74.791	ENSSFOG00015024101	RBM47	97	75.648	Scleropages_formosus
ENSCSAG00000017060	RBM47	100	75.122	ENSSMAG00000009744	rbm47	94	82.486	Scophthalmus_maximus
ENSCSAG00000017060	RBM47	100	78.500	ENSSDUG00000022684	rbm47	100	76.087	Seriola_dumerili
ENSCSAG00000017060	RBM47	100	78.833	ENSSLDG00000003109	rbm47	92	84.986	Seriola_lalandi_dorsalis
ENSCSAG00000017060	RBM47	84	95.759	ENSSARG00000001735	RBM47	75	95.759	Sorex_araneus
ENSCSAG00000017060	RBM47	100	87.772	ENSSPUG00000007515	RBM47	100	91.176	Sphenodon_punctatus
ENSCSAG00000017060	RBM47	100	78.833	ENSSPAG00000001257	rbm47	93	85.593	Stegastes_partitus
ENSCSAG00000017060	RBM47	100	96.807	ENSSSCG00000008796	RBM47	100	96.807	Sus_scrofa
ENSCSAG00000017060	RBM47	100	89.447	ENSTGUG00000008705	RBM47	100	89.950	Taeniopygia_guttata
ENSCSAG00000017060	RBM47	100	76.087	ENSTRUG00000014050	rbm47	100	74.415	Takifugu_rubripes
ENSCSAG00000017060	RBM47	100	75.817	ENSTNIG00000006127	rbm47	95	77.163	Tetraodon_nigroviridis
ENSCSAG00000017060	RBM47	76	91.139	ENSTBEG00000001607	RBM47	76	91.139	Tupaia_belangeri
ENSCSAG00000017060	RBM47	100	96.134	ENSTTRG00000002839	RBM47	100	96.134	Tursiops_truncatus
ENSCSAG00000017060	RBM47	100	96.970	ENSUAMG00000021346	RBM47	100	96.970	Ursus_americanus
ENSCSAG00000017060	RBM47	57	98.630	ENSVPAG00000000641	-	57	98.630	Vicugna_pacos
ENSCSAG00000017060	RBM47	96	94.580	ENSVVUG00000014774	RBM47	100	93.624	Vulpes_vulpes
ENSCSAG00000017060	RBM47	100	85.092	ENSXETG00000012802	rbm47	100	84.757	Xenopus_tropicalis
ENSCSAG00000017060	RBM47	88	83.245	ENSXCOG00000000780	rbm47	100	80.481	Xiphophorus_couchianus
ENSCSAG00000017060	RBM47	100	77.000	ENSXMAG00000009874	rbm47	93	83.853	Xiphophorus_maculatus