EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000017369 (Gene tree)
Gene ID: 103241068
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 30083 bases
Position: chr14:694126-724208
Accession: 103241068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000013404	ResIII	PF04851.15	4.8e-26	1	2
ENSCSAP00000013404	ResIII	PF04851.15	4.8e-26	2	2
ENSCSAP00000013404	DEAD	PF00270.29	3.1e-52	1	2
ENSCSAP00000013404	DEAD	PF00270.29	3.1e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000015464	SNRNP200-201	6544	XM_008007969	ENSCSAP00000013404	2136 (aa)	XP_008006160	A0A0D9RXR5

Gene Model

Click here to download ENSCSAG00000017369's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000017369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000017369	SNRNP200	86	42.208	ENSCSAG00000014674	ASCC3	80	44.463

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000017369	SNRNP200	100	99.953	ENSG00000144028	SNRNP200	100	99.953	Homo_sapiens
ENSCSAG00000017369	SNRNP200	99	90.888	ENSAPOG00000010223	snrnp200	99	90.777	Acanthochromis_polyacanthus
ENSCSAG00000017369	SNRNP200	100	99.813	ENSAMEG00000008996	SNRNP200	100	99.813	Ailuropoda_melanoleuca
ENSCSAG00000017369	SNRNP200	97	90.257	ENSACIG00000001764	snrnp200	98	90.257	Amphilophus_citrinellus
ENSCSAG00000017369	SNRNP200	99	90.794	ENSAOCG00000024593	snrnp200	100	90.043	Amphiprion_ocellaris
ENSCSAG00000017369	SNRNP200	97	90.096	ENSAPEG00000012554	snrnp200	100	90.096	Amphiprion_percula
ENSCSAG00000017369	SNRNP200	99	90.653	ENSATEG00000022522	snrnp200	99	90.543	Anabas_testudineus
ENSCSAG00000017369	SNRNP200	99	97.643	ENSAPLG00000004313	SNRNP200	100	97.643	Anas_platyrhynchos
ENSCSAG00000017369	SNRNP200	99	97.497	ENSACAG00000000434	SNRNP200	100	97.497	Anolis_carolinensis
ENSCSAG00000017369	SNRNP200	100	95.382	ENSANAG00000036625	SNRNP200	100	95.802	Aotus_nancymaae
ENSCSAG00000017369	SNRNP200	99	90.559	ENSACLG00000011188	snrnp200	99	90.449	Astatotilapia_calliptera
ENSCSAG00000017369	SNRNP200	99	90.606	ENSAMXG00000005684	snrnp200	99	90.496	Astyanax_mexicanus
ENSCSAG00000017369	SNRNP200	100	99.251	ENSBTAG00000000848	SNRNP200	100	99.251	Bos_taurus
ENSCSAG00000017369	SNRNP200	100	99.906	ENSCJAG00000007514	SNRNP200	100	99.906	Callithrix_jacchus
ENSCSAG00000017369	SNRNP200	100	99.020	ENSCAFG00020019979	SNRNP200	100	99.825	Canis_lupus_dingo
ENSCSAG00000017369	SNRNP200	100	99.438	ENSCHIG00000020611	SNRNP200	100	99.438	Capra_hircus
ENSCSAG00000017369	SNRNP200	100	99.860	ENSTSYG00000010467	SNRNP200	100	99.860	Carlito_syrichta
ENSCSAG00000017369	SNRNP200	99	99.389	ENSCAPG00000017234	SNRNP200	99	99.389	Cavia_aperea
ENSCSAG00000017369	SNRNP200	100	99.672	ENSCPOG00000006776	SNRNP200	100	99.672	Cavia_porcellus
ENSCSAG00000017369	SNRNP200	100	99.906	ENSCCAG00000033962	SNRNP200	100	99.906	Cebus_capucinus
ENSCSAG00000017369	SNRNP200	100	99.953	ENSCATG00000015790	SNRNP200	100	99.953	Cercocebus_atys
ENSCSAG00000017369	SNRNP200	100	99.532	ENSCLAG00000004116	SNRNP200	100	99.532	Chinchilla_lanigera
ENSCSAG00000017369	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSCSAG00000017369	SNRNP200	100	97.709	ENSCPBG00000022571	SNRNP200	100	97.709	Chrysemys_picta_bellii
ENSCSAG00000017369	SNRNP200	99	76.646	ENSCING00000005082	-	99	76.787	Ciona_intestinalis
ENSCSAG00000017369	SNRNP200	100	94.442	ENSCANG00000033932	SNRNP200	100	99.900	Colobus_angolensis_palliatus
ENSCSAG00000017369	SNRNP200	100	99.719	ENSCGRG00001022610	Snrnp200	100	99.719	Cricetulus_griseus_chok1gshd
ENSCSAG00000017369	SNRNP200	100	99.158	ENSCGRG00000016472	Snrnp200	100	99.158	Cricetulus_griseus_crigri
ENSCSAG00000017369	SNRNP200	100	89.934	ENSCSEG00000016399	snrnp200	100	89.934	Cynoglossus_semilaevis
ENSCSAG00000017369	SNRNP200	100	85.627	ENSCVAG00000017631	snrnp200	99	85.627	Cyprinodon_variegatus
ENSCSAG00000017369	SNRNP200	100	90.356	ENSDARG00000077536	snrnp200	99	90.356	Danio_rerio
ENSCSAG00000017369	SNRNP200	100	98.315	ENSDNOG00000011227	SNRNP200	100	98.315	Dasypus_novemcinctus
ENSCSAG00000017369	SNRNP200	100	97.101	ENSDORG00000005861	Snrnp200	100	97.101	Dipodomys_ordii
ENSCSAG00000017369	SNRNP200	100	74.302	FBgn0263599	l(3)72Ab	99	74.209	Drosophila_melanogaster
ENSCSAG00000017369	SNRNP200	95	99.742	ENSETEG00000000162	SNRNP200	74	99.742	Echinops_telfairi
ENSCSAG00000017369	SNRNP200	83	81.256	ENSEBUG00000016524	snrnp200	95	81.256	Eptatretus_burgeri
ENSCSAG00000017369	SNRNP200	100	98.695	ENSEASG00005001884	SNRNP200	100	98.695	Equus_asinus_asinus
ENSCSAG00000017369	SNRNP200	100	99.813	ENSECAG00000019675	SNRNP200	100	99.813	Equus_caballus
ENSCSAG00000017369	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSCSAG00000017369	SNRNP200	99	90.888	ENSELUG00000018948	snrnp200	99	90.777	Esox_lucius
ENSCSAG00000017369	SNRNP200	100	99.860	ENSFCAG00000010699	SNRNP200	100	99.860	Felis_catus
ENSCSAG00000017369	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSCSAG00000017369	SNRNP200	100	99.579	ENSFDAG00000004683	SNRNP200	100	99.579	Fukomys_damarensis
ENSCSAG00000017369	SNRNP200	100	87.828	ENSFHEG00000003786	snrnp200	99	87.828	Fundulus_heteroclitus
ENSCSAG00000017369	SNRNP200	100	89.720	ENSGMOG00000004881	snrnp200	99	89.673	Gadus_morhua
ENSCSAG00000017369	SNRNP200	100	88.015	ENSGAFG00000010807	snrnp200	99	88.015	Gambusia_affinis
ENSCSAG00000017369	SNRNP200	100	90.005	ENSGACG00000011474	snrnp200	99	89.911	Gasterosteus_aculeatus
ENSCSAG00000017369	SNRNP200	95	97.635	ENSGAGG00000016069	SNRNP200	99	97.635	Gopherus_agassizii
ENSCSAG00000017369	SNRNP200	100	99.953	ENSGGOG00000005174	SNRNP200	100	99.953	Gorilla_gorilla
ENSCSAG00000017369	SNRNP200	97	87.780	ENSHBUG00000011322	snrnp200	99	87.827	Haplochromis_burtoni
ENSCSAG00000017369	SNRNP200	100	99.672	ENSHGLG00000006654	SNRNP200	100	99.672	Heterocephalus_glaber_female
ENSCSAG00000017369	SNRNP200	100	99.672	ENSHGLG00100018594	SNRNP200	100	99.672	Heterocephalus_glaber_male
ENSCSAG00000017369	SNRNP200	100	99.813	ENSSTOG00000016351	SNRNP200	100	99.813	Ictidomys_tridecemlineatus
ENSCSAG00000017369	SNRNP200	100	99.625	ENSJJAG00000023659	Snrnp200	100	99.625	Jaculus_jaculus
ENSCSAG00000017369	SNRNP200	100	87.541	ENSKMAG00000003665	snrnp200	99	87.541	Kryptolebias_marmoratus
ENSCSAG00000017369	SNRNP200	100	90.262	ENSLBEG00000021585	snrnp200	99	90.262	Labrus_bergylta
ENSCSAG00000017369	SNRNP200	82	94.664	ENSLACG00000000226	SNRNP200	99	94.664	Latimeria_chalumnae
ENSCSAG00000017369	SNRNP200	100	92.228	ENSLOCG00000015198	snrnp200	99	92.228	Lepisosteus_oculatus
ENSCSAG00000017369	SNRNP200	100	99.438	ENSLAFG00000015626	SNRNP200	100	99.438	Loxodonta_africana
ENSCSAG00000017369	SNRNP200	100	99.906	ENSMFAG00000040174	SNRNP200	100	99.906	Macaca_fascicularis
ENSCSAG00000017369	SNRNP200	100	99.906	ENSMMUG00000023261	SNRNP200	100	99.906	Macaca_mulatta
ENSCSAG00000017369	SNRNP200	100	99.860	ENSMNEG00000032398	SNRNP200	100	99.860	Macaca_nemestrina
ENSCSAG00000017369	SNRNP200	100	99.953	ENSMLEG00000019083	SNRNP200	100	99.953	Mandrillus_leucophaeus
ENSCSAG00000017369	SNRNP200	100	90.220	ENSMAMG00000007851	snrnp200	99	90.173	Mastacembelus_armatus
ENSCSAG00000017369	SNRNP200	97	87.780	ENSMZEG00005010787	snrnp200	99	87.827	Maylandia_zebra
ENSCSAG00000017369	SNRNP200	97	97.194	ENSMGAG00000001831	SNRNP200	100	97.194	Meleagris_gallopavo
ENSCSAG00000017369	SNRNP200	100	99.766	ENSMAUG00000011825	Snrnp200	100	99.766	Mesocricetus_auratus
ENSCSAG00000017369	SNRNP200	100	99.813	ENSMICG00000004710	SNRNP200	100	99.813	Microcebus_murinus
ENSCSAG00000017369	SNRNP200	100	97.191	ENSMOCG00000011814	Snrnp200	100	97.191	Microtus_ochrogaster
ENSCSAG00000017369	SNRNP200	99	89.009	ENSMMOG00000014167	snrnp200	99	88.904	Mola_mola
ENSCSAG00000017369	SNRNP200	100	98.923	ENSMODG00000008475	SNRNP200	100	98.923	Monodelphis_domestica
ENSCSAG00000017369	SNRNP200	99	90.794	ENSMALG00000001973	snrnp200	99	90.684	Monopterus_albus
ENSCSAG00000017369	SNRNP200	100	99.579	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.579	Mus_caroli
ENSCSAG00000017369	SNRNP200	100	99.625	ENSMUSG00000003660	Snrnp200	100	99.625	Mus_musculus
ENSCSAG00000017369	SNRNP200	100	99.672	MGP_PahariEiJ_G0025695	Snrnp200	100	99.672	Mus_pahari
ENSCSAG00000017369	SNRNP200	100	99.625	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.625	Mus_spretus
ENSCSAG00000017369	SNRNP200	100	99.766	ENSMPUG00000008949	SNRNP200	100	99.766	Mustela_putorius_furo
ENSCSAG00000017369	SNRNP200	100	95.506	ENSMLUG00000027511	-	100	95.506	Myotis_lucifugus
ENSCSAG00000017369	SNRNP200	100	99.205	ENSMLUG00000010493	SNRNP200	100	99.205	Myotis_lucifugus
ENSCSAG00000017369	SNRNP200	100	99.860	ENSNGAG00000021993	Snrnp200	100	99.860	Nannospalax_galili
ENSCSAG00000017369	SNRNP200	90	90.319	ENSNBRG00000017960	snrnp200	98	90.319	Neolamprologus_brichardi
ENSCSAG00000017369	SNRNP200	100	95.305	ENSNLEG00000000025	SNRNP200	100	95.593	Nomascus_leucogenys
ENSCSAG00000017369	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSCSAG00000017369	SNRNP200	100	95.927	ENSOPRG00000015464	SNRNP200	100	95.927	Ochotona_princeps
ENSCSAG00000017369	SNRNP200	100	99.532	ENSODEG00000008366	SNRNP200	100	99.532	Octodon_degus
ENSCSAG00000017369	SNRNP200	99	90.559	ENSONIG00000010714	snrnp200	99	90.449	Oreochromis_niloticus
ENSCSAG00000017369	SNRNP200	100	99.719	ENSOCUG00000009864	SNRNP200	100	99.719	Oryctolagus_cuniculus
ENSCSAG00000017369	SNRNP200	100	90.356	ENSORLG00000012286	snrnp200	100	90.356	Oryzias_latipes
ENSCSAG00000017369	SNRNP200	100	90.403	ENSORLG00020004648	snrnp200	100	90.403	Oryzias_latipes_hni
ENSCSAG00000017369	SNRNP200	100	90.356	ENSORLG00015019114	snrnp200	100	90.391	Oryzias_latipes_hsok
ENSCSAG00000017369	SNRNP200	99	90.559	ENSOMEG00000011834	snrnp200	99	90.449	Oryzias_melastigma
ENSCSAG00000017369	SNRNP200	100	99.860	ENSOGAG00000006879	SNRNP200	100	99.860	Otolemur_garnettii
ENSCSAG00000017369	SNRNP200	100	98.409	ENSOARG00000013949	SNRNP200	100	98.409	Ovis_aries
ENSCSAG00000017369	SNRNP200	100	99.953	ENSPPAG00000041559	SNRNP200	100	99.953	Pan_paniscus
ENSCSAG00000017369	SNRNP200	100	99.860	ENSPPRG00000004435	SNRNP200	100	99.860	Panthera_pardus
ENSCSAG00000017369	SNRNP200	100	99.391	ENSPTIG00000006380	SNRNP200	100	99.391	Panthera_tigris_altaica
ENSCSAG00000017369	SNRNP200	100	99.953	ENSPTRG00000012230	SNRNP200	100	99.953	Pan_troglodytes
ENSCSAG00000017369	SNRNP200	100	99.906	ENSPANG00000006017	SNRNP200	100	99.906	Papio_anubis
ENSCSAG00000017369	SNRNP200	100	91.152	ENSPKIG00000014762	snrnp200	99	91.152	Paramormyrops_kingsleyae
ENSCSAG00000017369	SNRNP200	100	96.678	ENSPSIG00000008580	SNRNP200	100	96.678	Pelodiscus_sinensis
ENSCSAG00000017369	SNRNP200	100	98.923	ENSPCIG00000023050	SNRNP200	100	98.923	Phascolarctos_cinereus
ENSCSAG00000017369	SNRNP200	100	90.360	ENSPFOG00000015110	snrnp200	99	90.360	Poecilia_formosa
ENSCSAG00000017369	SNRNP200	97	90.220	ENSPLAG00000006711	snrnp200	99	90.220	Poecilia_latipinna
ENSCSAG00000017369	SNRNP200	97	90.165	ENSPMEG00000021166	snrnp200	99	90.165	Poecilia_mexicana
ENSCSAG00000017369	SNRNP200	100	90.449	ENSPREG00000008875	snrnp200	99	90.449	Poecilia_reticulata
ENSCSAG00000017369	SNRNP200	100	99.953	ENSPPYG00000012068	SNRNP200	100	99.953	Pongo_abelii
ENSCSAG00000017369	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSCSAG00000017369	SNRNP200	100	99.860	ENSPCOG00000024608	SNRNP200	100	99.860	Propithecus_coquereli
ENSCSAG00000017369	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSCSAG00000017369	SNRNP200	99	86.136	ENSPNYG00000017476	snrnp200	99	86.041	Pundamilia_nyererei
ENSCSAG00000017369	SNRNP200	100	86.096	ENSPNAG00000010998	snrnp200	99	86.096	Pygocentrus_nattereri
ENSCSAG00000017369	SNRNP200	100	99.766	ENSRNOG00000012157	Snrnp200	100	99.766	Rattus_norvegicus
ENSCSAG00000017369	SNRNP200	100	99.953	ENSRBIG00000044690	-	100	99.953	Rhinopithecus_bieti
ENSCSAG00000017369	SNRNP200	100	99.953	ENSRROG00000037952	-	100	99.953	Rhinopithecus_roxellana
ENSCSAG00000017369	SNRNP200	100	99.906	ENSSBOG00000035471	SNRNP200	100	99.906	Saimiri_boliviensis_boliviensis
ENSCSAG00000017369	SNRNP200	97	98.839	ENSSHAG00000000758	SNRNP200	100	98.839	Sarcophilus_harrisii
ENSCSAG00000017369	SNRNP200	99	91.639	ENSSFOG00015018826	snrnp200	99	91.526	Scleropages_formosus
ENSCSAG00000017369	SNRNP200	99	90.512	ENSSMAG00000005463	snrnp200	99	90.403	Scophthalmus_maximus
ENSCSAG00000017369	SNRNP200	99	90.747	ENSSDUG00000021410	snrnp200	99	90.637	Seriola_dumerili
ENSCSAG00000017369	SNRNP200	99	90.700	ENSSLDG00000010884	snrnp200	99	90.590	Seriola_lalandi_dorsalis
ENSCSAG00000017369	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSCSAG00000017369	SNRNP200	100	97.566	ENSSPUG00000003726	-	100	97.566	Sphenodon_punctatus
ENSCSAG00000017369	SNRNP200	99	90.794	ENSSPAG00000001842	snrnp200	99	90.684	Stegastes_partitus
ENSCSAG00000017369	SNRNP200	100	99.672	ENSSSCG00000008127	SNRNP200	100	99.672	Sus_scrofa
ENSCSAG00000017369	SNRNP200	99	87.975	ENSTGUG00000014475	-	100	87.975	Taeniopygia_guttata
ENSCSAG00000017369	SNRNP200	99	90.465	ENSTRUG00000001307	snrnp200	99	90.356	Takifugu_rubripes
ENSCSAG00000017369	SNRNP200	100	85.925	ENSTNIG00000004320	snrnp200	100	85.925	Tetraodon_nigroviridis
ENSCSAG00000017369	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSCSAG00000017369	SNRNP200	100	99.485	ENSTTRG00000004983	SNRNP200	100	99.485	Tursiops_truncatus
ENSCSAG00000017369	SNRNP200	75	93.023	ENSUAMG00000008395	-	95	93.023	Ursus_americanus
ENSCSAG00000017369	SNRNP200	100	99.860	ENSUMAG00000012385	SNRNP200	100	99.860	Ursus_maritimus
ENSCSAG00000017369	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSCSAG00000017369	SNRNP200	100	99.626	ENSVVUG00000026247	SNRNP200	100	99.626	Vulpes_vulpes
ENSCSAG00000017369	SNRNP200	100	94.343	ENSXETG00000001243	snrnp200	100	94.343	Xenopus_tropicalis
ENSCSAG00000017369	SNRNP200	97	90.471	ENSXMAG00000002058	snrnp200	98	90.471	Xiphophorus_maculatus