EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000018304 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 11950 bases
Position: chrY:5352628-5364577
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000014316	RBM1CTR	PF08081.11	2e-19	1	1
ENSCSAP00000014317	RBM1CTR	PF08081.11	2e-19	1	1
ENSCSAP00000014316	RRM_1	PF00076.22	2.4e-21	1	1
ENSCSAP00000014317	RRM_1	PF00076.22	2.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000016402	-	1449	-	ENSCSAP00000014316	482 (aa)	-	A0A0D9S0C7
ENSCSAT00000016403	-	1470	-	ENSCSAP00000014317	489 (aa)	-	A0A0D9S0C8

Gene Model

Click here to download ENSCSAG00000018304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000018304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000018304	-	82	46.947	ENSCSAG00000019334	RBMXL2	93	49.618
ENSCSAG00000018304	-	99	55.823	ENSCSAG00000018310	-	100	55.534
ENSCSAG00000018304	-	87	44.403	ENSCSAG00000008478	-	100	47.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000018304	-	100	67.068	ENSG00000244395	RBMY1D	90	93.151	Homo_sapiens
ENSCSAG00000018304	-	100	67.269	ENSG00000242875	RBMY1B	90	93.151	Homo_sapiens
ENSCSAG00000018304	-	100	66.867	ENSG00000242389	RBMY1E	90	93.151	Homo_sapiens
ENSCSAG00000018304	-	100	67.671	ENSG00000169800	RBMY1F	100	67.081	Homo_sapiens
ENSCSAG00000018304	-	100	67.269	ENSG00000234414	RBMY1A1	90	93.151	Homo_sapiens
ENSCSAG00000018304	-	100	67.671	ENSG00000226941	RBMY1J	100	66.466	Homo_sapiens
ENSCSAG00000018304	-	77	47.137	ENSMUSG00000091987	Gm10352	97	47.137	Mus_musculus
ENSCSAG00000018304	-	77	46.696	ENSMUSG00000095948	Gm21708	97	46.696	Mus_musculus
ENSCSAG00000018304	-	77	46.696	ENSMUSG00000094511	Gm21693	97	46.696	Mus_musculus
ENSCSAG00000018304	-	77	47.137	ENSMUSG00000095852	Gm10256	97	47.137	Mus_musculus
ENSCSAG00000018304	-	77	46.696	ENSMUSG00000093987	Gm21704	97	46.696	Mus_musculus
ENSCSAG00000018304	-	77	46.696	ENSMUSG00000093918	Gm21677	97	46.696	Mus_musculus
ENSCSAG00000018304	-	77	46.696	ENSMUSG00000094658	Rbmy	97	46.696	Mus_musculus
ENSCSAG00000018304	-	77	48.018	ENSMUSG00000096520	Gm3376	97	48.018	Mus_musculus
ENSCSAG00000018304	-	77	47.137	ENSMUSG00000102053	Gm4064	97	47.137	Mus_musculus
ENSCSAG00000018304	-	100	64.490	ENSPTRG00000050914	-	86	79.452	Pan_troglodytes
ENSCSAG00000018304	-	100	67.006	ENSPTRG00000042791	-	99	85.388	Pan_troglodytes
ENSCSAG00000018304	-	100	64.128	ENSPTRG00000043157	-	87	84.475	Pan_troglodytes
ENSCSAG00000018304	-	100	64.128	ENSPTRG00000047951	-	87	84.475	Pan_troglodytes
ENSCSAG00000018304	-	100	66.000	ENSPTRG00000047385	-	83	84.475	Pan_troglodytes
ENSCSAG00000018304	-	100	67.068	ENSPTRG00000046311	-	100	66.667	Pan_troglodytes
ENSCSAG00000018304	-	81	84.475	ENSPTRG00000046270	-	87	84.475	Pan_troglodytes
ENSCSAG00000018304	-	100	67.269	ENSPTRG00000051022	-	100	66.064	Pan_troglodytes
ENSCSAG00000018304	-	98	52.411	ENSPTRG00000049088	-	91	72.727	Pan_troglodytes
ENSCSAG00000018304	-	100	62.998	ENSPTRG00000045105	-	87	85.388	Pan_troglodytes
ENSCSAG00000018304	-	100	67.551	ENSPTRG00000051395	-	100	67.551	Pan_troglodytes
ENSCSAG00000018304	-	77	49.774	ENSRNOG00000060963	Rbmy1j	98	51.131	Rattus_norvegicus
ENSCSAG00000018304	-	95	94.977	ENSRBIG00000007617	-	99	94.977	Rhinopithecus_bieti
ENSCSAG00000018304	-	97	53.151	ENSRBIG00000029066	-	98	64.474	Rhinopithecus_bieti
ENSCSAG00000018304	-	88	86.982	ENSRROG00000029740	-	99	88.344	Rhinopithecus_roxellana