EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000018401 (Gene tree)
Gene ID: 103247808
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 2377 bases
Position: chrAQIB01158381.1:191-2567
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000014407	APOBEC_N	PF08210.11	1.7e-32	1	1
ENSCSAP00000014407	APOBEC_C	PF05240.14	7.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000016501	-	681	-	ENSCSAP00000014407	209 (aa)	-	A0A0D9S0L8

Gene Model

Click here to download ENSCSAG00000018401's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000018401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000018401	-	67	35.417	ENSCSAG00000006371	APOBEC3H	61	35.417
ENSCSAG00000018401	-	70	54.795	ENSCSAG00000006376	APOBEC3G	71	54.795
ENSCSAG00000018401	-	70	37.838	ENSCSAG00000006402	APOBEC3C	74	37.838
ENSCSAG00000018401	-	70	43.624	ENSCSAG00000009663	AICDA	70	43.624
ENSCSAG00000018401	-	89	38.667	ENSCSAG00000006382	APOBEC3F	73	38.667
ENSCSAG00000018401	-	70	82.993	ENSCSAG00000006445	-	58	82.993
ENSCSAG00000018401	-	67	32.143	ENSCSAG00000011177	APOBEC2	57	34.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000018401	-	70	80.952	ENSG00000179750	APOBEC3B	75	80.952	Homo_sapiens
ENSCSAG00000018401	-	70	76.871	ENSG00000128383	APOBEC3A	72	76.871	Homo_sapiens
ENSCSAG00000018401	-	68	50.000	ENSCJAG00000012500	-	70	50.000	Callithrix_jacchus
ENSCSAG00000018401	-	69	60.690	ENSTSYG00000035593	-	72	60.690	Carlito_syrichta
ENSCSAG00000018401	-	70	60.959	ENSCCAG00000027450	-	74	60.959	Cebus_capucinus
ENSCSAG00000018401	-	70	90.476	ENSCATG00000013527	-	73	90.476	Cercocebus_atys
ENSCSAG00000018401	-	70	87.075	ENSCANG00000030513	-	74	87.075	Colobus_angolensis_palliatus
ENSCSAG00000018401	-	70	79.592	ENSGGOG00000006721	APOBEC3B	74	79.592	Gorilla_gorilla
ENSCSAG00000018401	-	70	89.116	ENSMFAG00000008980	APOBEC3A	73	89.116	Macaca_fascicularis
ENSCSAG00000018401	-	70	89.116	ENSMMUG00000042504	APOBEC3A	73	89.116	Macaca_mulatta
ENSCSAG00000018401	-	70	85.714	ENSMMUG00000004015	-	75	85.714	Macaca_mulatta
ENSCSAG00000018401	-	70	83.333	ENSMNEG00000043211	-	80	83.333	Macaca_nemestrina
ENSCSAG00000018401	-	70	83.673	ENSMLEG00000004809	-	74	83.673	Mandrillus_leucophaeus
ENSCSAG00000018401	-	70	79.592	ENSNLEG00000015215	-	72	76.190	Nomascus_leucogenys
ENSCSAG00000018401	-	70	81.633	ENSPPAG00000009288	APOBEC3B	74	81.633	Pan_paniscus
ENSCSAG00000018401	-	70	76.190	ENSPTRG00000014384	APOBEC3B	72	76.190	Pan_troglodytes
ENSCSAG00000018401	-	70	91.837	ENSPANG00000006941	APOBEC3B	73	91.837	Papio_anubis
ENSCSAG00000018401	-	70	78.231	ENSPPYG00000011831	-	75	78.231	Pongo_abelii
ENSCSAG00000018401	-	69	57.931	ENSPCOG00000017606	-	92	57.931	Propithecus_coquereli
ENSCSAG00000018401	-	70	83.673	ENSRBIG00000042829	-	77	83.673	Rhinopithecus_bieti
ENSCSAG00000018401	-	70	83.673	ENSRROG00000028773	APOBEC3G	77	83.673	Rhinopithecus_roxellana