EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000019007 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 288 bases
Position: chr4:62152866-62153153
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000018522	LSM	PF01423.22	1.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000019097	-	288	-	ENSCSAP00000018522	96 (aa)	-	A0A0D9SCD3

Gene Model

Click here to download ENSCSAG00000019007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000019007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000019007	-	73	35.526	ENSCSAG00000011599	LSM7	72	35.526
ENSCSAG00000019007	-	100	95.833	ENSCSAG00000010802	-	100	95.833
ENSCSAG00000019007	-	81	34.615	ENSCSAG00000015485	LSM1	58	34.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000019007	-	100	95.833	ENSG00000128534	LSM8	100	97.333	Homo_sapiens
ENSCSAG00000019007	-	100	89.583	ENSAPOG00000008649	lsm8	100	89.583	Acanthochromis_polyacanthus
ENSCSAG00000019007	-	100	95.833	ENSAMEG00000001162	LSM8	100	95.833	Ailuropoda_melanoleuca
ENSCSAG00000019007	-	78	96.000	ENSACIG00000014694	lsm8	100	96.000	Amphilophus_citrinellus
ENSCSAG00000019007	-	100	89.583	ENSAOCG00000013926	lsm8	100	89.583	Amphiprion_ocellaris
ENSCSAG00000019007	-	100	89.583	ENSAPEG00000023502	lsm8	100	89.583	Amphiprion_percula
ENSCSAG00000019007	-	78	96.000	ENSATEG00000023432	lsm8	100	96.000	Anabas_testudineus
ENSCSAG00000019007	-	94	92.222	ENSAPLG00000005115	LSM8	91	92.222	Anas_platyrhynchos
ENSCSAG00000019007	-	100	95.833	ENSANAG00000027771	LSM8	100	95.833	Aotus_nancymaae
ENSCSAG00000019007	-	100	89.583	ENSACLG00000011253	lsm8	100	89.583	Astatotilapia_calliptera
ENSCSAG00000019007	-	100	90.625	ENSAMXG00000042902	lsm8	100	90.625	Astyanax_mexicanus
ENSCSAG00000019007	-	100	95.833	ENSBTAG00000012649	LSM8	100	95.833	Bos_taurus
ENSCSAG00000019007	-	98	58.511	WBGene00003082	lsm-8	96	58.511	Caenorhabditis_elegans
ENSCSAG00000019007	-	100	95.833	ENSCJAG00000046406	LSM8	100	95.833	Callithrix_jacchus
ENSCSAG00000019007	-	99	95.789	ENSCAFG00000016459	LSM8	96	95.789	Canis_familiaris
ENSCSAG00000019007	-	89	94.118	ENSCAFG00020012800	-	66	94.118	Canis_lupus_dingo
ENSCSAG00000019007	-	100	95.833	ENSCAFG00020007643	-	100	95.833	Canis_lupus_dingo
ENSCSAG00000019007	-	89	97.647	ENSCHIG00000014201	LSM8	90	97.647	Capra_hircus
ENSCSAG00000019007	-	100	95.833	ENSTSYG00000032434	LSM8	100	95.833	Carlito_syrichta
ENSCSAG00000019007	-	77	95.946	ENSCAPG00000008253	LSM8	100	95.946	Cavia_aperea
ENSCSAG00000019007	-	100	95.833	ENSCPOG00000035673	LSM8	100	95.833	Cavia_porcellus
ENSCSAG00000019007	-	100	95.833	ENSCCAG00000021329	LSM8	100	95.833	Cebus_capucinus
ENSCSAG00000019007	-	100	95.833	ENSCATG00000045302	LSM8	100	95.833	Cercocebus_atys
ENSCSAG00000019007	-	100	95.833	ENSCLAG00000003726	LSM8	100	95.833	Chinchilla_lanigera
ENSCSAG00000019007	-	89	97.647	ENSCPBG00000008154	LSM8	87	97.647	Chrysemys_picta_bellii
ENSCSAG00000019007	-	100	73.958	ENSCING00000024877	-	100	73.958	Ciona_intestinalis
ENSCSAG00000019007	-	100	95.833	ENSCANG00000040728	LSM8	100	95.833	Colobus_angolensis_palliatus
ENSCSAG00000019007	-	100	95.833	ENSCGRG00001000450	Lsm8	100	95.833	Cricetulus_griseus_chok1gshd
ENSCSAG00000019007	-	89	97.647	ENSCGRG00000005587	Lsm8	100	97.647	Cricetulus_griseus_crigri
ENSCSAG00000019007	-	100	78.125	ENSCSEG00000004164	lsm8	100	78.125	Cynoglossus_semilaevis
ENSCSAG00000019007	-	100	88.542	ENSCVAG00000020547	lsm8	100	88.542	Cyprinodon_variegatus
ENSCSAG00000019007	-	100	87.500	ENSDARG00000091656	lsm8	100	87.500	Danio_rerio
ENSCSAG00000019007	-	100	95.833	ENSDNOG00000034613	LSM8	100	95.833	Dasypus_novemcinctus
ENSCSAG00000019007	-	100	95.833	ENSDORG00000027868	Lsm8	100	95.833	Dipodomys_ordii
ENSCSAG00000019007	-	98	68.085	FBgn0035271	CG2021	99	68.085	Drosophila_melanogaster
ENSCSAG00000019007	-	100	94.792	ENSETEG00000011594	LSM8	100	94.792	Echinops_telfairi
ENSCSAG00000019007	-	77	90.541	ENSEBUG00000012017	lsm8	100	90.541	Eptatretus_burgeri
ENSCSAG00000019007	-	100	95.833	ENSEASG00005008932	LSM8	62	95.833	Equus_asinus_asinus
ENSCSAG00000019007	-	89	97.647	ENSECAG00000024025	LSM8	77	97.647	Equus_caballus
ENSCSAG00000019007	-	100	88.542	ENSELUG00000010138	lsm8	100	88.542	Esox_lucius
ENSCSAG00000019007	-	85	70.732	ENSFCAG00000044794	-	83	70.732	Felis_catus
ENSCSAG00000019007	-	100	95.833	ENSFCAG00000036620	-	100	95.833	Felis_catus
ENSCSAG00000019007	-	100	94.792	ENSFALG00000010023	LSM8	100	94.792	Ficedula_albicollis
ENSCSAG00000019007	-	100	95.833	ENSFDAG00000019530	LSM8	100	95.833	Fukomys_damarensis
ENSCSAG00000019007	-	100	89.583	ENSFHEG00000013729	lsm8	100	89.583	Fundulus_heteroclitus
ENSCSAG00000019007	-	100	94.792	ENSGALG00000009110	LSM8	100	94.792	Gallus_gallus
ENSCSAG00000019007	-	100	88.542	ENSGAFG00000001135	lsm8	100	88.542	Gambusia_affinis
ENSCSAG00000019007	-	100	95.833	ENSGAGG00000017366	LSM8	100	95.833	Gopherus_agassizii
ENSCSAG00000019007	-	100	95.833	ENSGGOG00000041883	LSM8	100	95.833	Gorilla_gorilla
ENSCSAG00000019007	-	100	89.583	ENSHBUG00000003646	lsm8	100	89.583	Haplochromis_burtoni
ENSCSAG00000019007	-	100	90.625	ENSHGLG00000019782	-	100	90.625	Heterocephalus_glaber_female
ENSCSAG00000019007	-	71	95.588	ENSHGLG00000001988	-	99	95.588	Heterocephalus_glaber_female
ENSCSAG00000019007	-	100	91.667	ENSHGLG00100012166	-	100	91.667	Heterocephalus_glaber_male
ENSCSAG00000019007	-	99	92.632	ENSHGLG00100003934	-	95	92.632	Heterocephalus_glaber_male
ENSCSAG00000019007	-	100	88.542	ENSHCOG00000005037	lsm8	100	88.542	Hippocampus_comes
ENSCSAG00000019007	-	100	90.625	ENSIPUG00000019811	NAA38	100	90.625	Ictalurus_punctatus
ENSCSAG00000019007	-	92	84.091	ENSSTOG00000034801	-	81	84.091	Ictidomys_tridecemlineatus
ENSCSAG00000019007	-	100	95.833	ENSSTOG00000009039	LSM8	100	95.833	Ictidomys_tridecemlineatus
ENSCSAG00000019007	-	100	95.833	ENSJJAG00000009031	Lsm8	99	95.833	Jaculus_jaculus
ENSCSAG00000019007	-	100	89.583	ENSKMAG00000018983	lsm8	100	89.583	Kryptolebias_marmoratus
ENSCSAG00000019007	-	100	90.625	ENSLACG00000010231	LSM8	100	90.625	Latimeria_chalumnae
ENSCSAG00000019007	-	100	89.583	ENSLOCG00000015580	lsm8	100	89.583	Lepisosteus_oculatus
ENSCSAG00000019007	-	100	94.845	ENSLAFG00000011242	LSM8	100	94.845	Loxodonta_africana
ENSCSAG00000019007	-	100	95.833	ENSMFAG00000035798	LSM8	100	95.833	Macaca_fascicularis
ENSCSAG00000019007	-	100	95.833	ENSMFAG00000013044	-	100	95.833	Macaca_fascicularis
ENSCSAG00000019007	-	100	95.833	ENSMMUG00000046401	LSM8	100	94.595	Macaca_mulatta
ENSCSAG00000019007	-	100	95.833	ENSMNEG00000036764	-	100	95.833	Macaca_nemestrina
ENSCSAG00000019007	-	78	96.000	ENSMNEG00000011141	-	100	96.000	Macaca_nemestrina
ENSCSAG00000019007	-	100	95.833	ENSMLEG00000035828	-	100	95.833	Mandrillus_leucophaeus
ENSCSAG00000019007	-	100	85.417	ENSMLEG00000039324	-	100	85.417	Mandrillus_leucophaeus
ENSCSAG00000019007	-	78	96.000	ENSMAMG00000018839	lsm8	100	96.000	Mastacembelus_armatus
ENSCSAG00000019007	-	100	89.583	ENSMZEG00005019138	lsm8	100	89.583	Maylandia_zebra
ENSCSAG00000019007	-	100	94.792	ENSMGAG00000008808	LSM8	100	94.792	Meleagris_gallopavo
ENSCSAG00000019007	-	100	78.125	ENSMAUG00000015356	-	100	78.125	Mesocricetus_auratus
ENSCSAG00000019007	-	75	90.278	ENSMAUG00000020287	-	100	87.838	Mesocricetus_auratus
ENSCSAG00000019007	-	100	88.542	ENSMAUG00000015721	-	100	88.542	Mesocricetus_auratus
ENSCSAG00000019007	-	100	95.833	ENSMICG00000042730	LSM8	100	95.833	Microcebus_murinus
ENSCSAG00000019007	-	100	95.833	ENSMOCG00000001688	Lsm8	100	95.833	Microtus_ochrogaster
ENSCSAG00000019007	-	78	96.000	ENSMMOG00000006046	lsm8	100	96.000	Mola_mola
ENSCSAG00000019007	-	76	84.000	ENSMODG00000015729	LSM8	96	84.000	Monodelphis_domestica
ENSCSAG00000019007	-	100	90.625	ENSMALG00000000405	lsm8	100	90.625	Monopterus_albus
ENSCSAG00000019007	-	100	95.833	MGP_CAROLIEiJ_G0028125	-	100	95.833	Mus_caroli
ENSCSAG00000019007	-	100	95.833	ENSMUSG00000044155	Lsm8	100	95.833	Mus_musculus
ENSCSAG00000019007	-	100	95.833	MGP_PahariEiJ_G0021881	Lsm8	100	97.333	Mus_pahari
ENSCSAG00000019007	-	100	95.833	MGP_SPRETEiJ_G0029125	-	100	95.833	Mus_spretus
ENSCSAG00000019007	-	100	94.792	ENSMLUG00000027762	-	100	94.792	Myotis_lucifugus
ENSCSAG00000019007	-	100	95.833	ENSMLUG00000006837	-	100	95.833	Myotis_lucifugus
ENSCSAG00000019007	-	100	95.833	ENSNGAG00000016554	Lsm8	100	95.833	Nannospalax_galili
ENSCSAG00000019007	-	100	89.583	ENSNBRG00000014441	lsm8	100	89.583	Neolamprologus_brichardi
ENSCSAG00000019007	-	100	95.833	ENSNLEG00000011768	LSM8	100	95.833	Nomascus_leucogenys
ENSCSAG00000019007	-	100	84.375	ENSMEUG00000007801	LSM8	100	84.375	Notamacropus_eugenii
ENSCSAG00000019007	-	89	97.647	ENSOPRG00000014809	LSM8	100	97.647	Ochotona_princeps
ENSCSAG00000019007	-	100	95.833	ENSODEG00000000418	-	100	95.833	Octodon_degus
ENSCSAG00000019007	-	90	79.070	ENSODEG00000020290	-	100	79.070	Octodon_degus
ENSCSAG00000019007	-	100	94.792	ENSOANG00000014536	LSM8	100	94.792	Ornithorhynchus_anatinus
ENSCSAG00000019007	-	100	94.845	ENSOCUG00000017359	LSM8	100	94.845	Oryctolagus_cuniculus
ENSCSAG00000019007	-	100	81.250	ENSORLG00000017432	lsm8	100	81.250	Oryzias_latipes
ENSCSAG00000019007	-	100	81.250	ENSORLG00020004376	lsm8	100	81.250	Oryzias_latipes_hni
ENSCSAG00000019007	-	100	89.583	ENSORLG00015003757	lsm8	100	89.583	Oryzias_latipes_hsok
ENSCSAG00000019007	-	100	77.083	ENSOMEG00000022509	lsm8	100	78.125	Oryzias_melastigma
ENSCSAG00000019007	-	100	95.833	ENSOGAG00000013377	LSM8	100	95.833	Otolemur_garnettii
ENSCSAG00000019007	-	100	95.833	ENSOARG00000017974	LSM8	100	95.833	Ovis_aries
ENSCSAG00000019007	-	78	97.333	ENSPPAG00000043228	-	100	97.333	Pan_paniscus
ENSCSAG00000019007	-	100	95.833	ENSPPRG00000006444	LSM8	100	95.833	Panthera_pardus
ENSCSAG00000019007	-	100	95.833	ENSPTIG00000004722	LSM8	100	95.833	Panthera_tigris_altaica
ENSCSAG00000019007	-	78	97.333	ENSPTRG00000046596	-	100	97.333	Pan_troglodytes
ENSCSAG00000019007	-	100	93.750	ENSPANG00000019395	-	100	93.750	Papio_anubis
ENSCSAG00000019007	-	100	95.833	ENSPANG00000035470	-	100	95.833	Papio_anubis
ENSCSAG00000019007	-	91	94.318	ENSPKIG00000006092	lsm8	89	94.318	Paramormyrops_kingsleyae
ENSCSAG00000019007	-	78	97.333	ENSPSIG00000017054	LSM8	100	97.333	Pelodiscus_sinensis
ENSCSAG00000019007	-	78	96.000	ENSPMGG00000016442	lsm8	100	96.000	Periophthalmus_magnuspinnatus
ENSCSAG00000019007	-	77	94.595	ENSPEMG00000009153	Lsm8	100	94.595	Peromyscus_maniculatus_bairdii
ENSCSAG00000019007	-	97	95.699	ENSPCIG00000021467	LSM8	98	95.699	Phascolarctos_cinereus
ENSCSAG00000019007	-	100	88.542	ENSPFOG00000012340	lsm8	100	88.542	Poecilia_formosa
ENSCSAG00000019007	-	100	84.375	ENSPLAG00000000516	lsm8	100	84.375	Poecilia_latipinna
ENSCSAG00000019007	-	100	88.542	ENSPMEG00000022567	lsm8	100	88.542	Poecilia_mexicana
ENSCSAG00000019007	-	92	73.684	ENSPREG00000005527	lsm8	82	73.684	Poecilia_reticulata
ENSCSAG00000019007	-	100	95.833	ENSPPYG00000017942	LSM8	100	95.833	Pongo_abelii
ENSCSAG00000019007	-	100	95.833	ENSPCOG00000003309	-	100	95.833	Propithecus_coquereli
ENSCSAG00000019007	-	99	74.737	ENSPCOG00000017982	-	99	74.737	Propithecus_coquereli
ENSCSAG00000019007	-	89	96.471	ENSPVAG00000000990	LSM8	100	96.471	Pteropus_vampyrus
ENSCSAG00000019007	-	100	89.583	ENSPNYG00000011448	lsm8	100	89.583	Pundamilia_nyererei
ENSCSAG00000019007	-	100	90.625	ENSPNAG00000010252	lsm8	100	90.625	Pygocentrus_nattereri
ENSCSAG00000019007	-	100	95.833	ENSRNOG00000058677	Lsm8	100	95.833	Rattus_norvegicus
ENSCSAG00000019007	-	100	95.833	ENSRBIG00000032851	LSM8	100	95.833	Rhinopithecus_bieti
ENSCSAG00000019007	-	100	95.833	ENSRROG00000039618	LSM8	100	95.833	Rhinopithecus_roxellana
ENSCSAG00000019007	-	100	95.833	ENSSBOG00000023223	LSM8	100	95.833	Saimiri_boliviensis_boliviensis
ENSCSAG00000019007	-	100	95.833	ENSSHAG00000018435	-	100	95.833	Sarcophilus_harrisii
ENSCSAG00000019007	-	100	87.500	ENSSFOG00015004412	lsm8	100	87.500	Scleropages_formosus
ENSCSAG00000019007	-	78	96.000	ENSSMAG00000009458	lsm8	100	96.000	Scophthalmus_maximus
ENSCSAG00000019007	-	100	89.583	ENSSDUG00000014702	lsm8	100	89.583	Seriola_dumerili
ENSCSAG00000019007	-	78	96.000	ENSSLDG00000016870	lsm8	100	96.000	Seriola_lalandi_dorsalis
ENSCSAG00000019007	-	75	97.222	ENSSARG00000009628	-	100	97.222	Sorex_araneus
ENSCSAG00000019007	-	100	95.833	ENSSPUG00000017419	LSM8	100	95.833	Sphenodon_punctatus
ENSCSAG00000019007	-	100	89.583	ENSSPAG00000021422	lsm8	100	89.583	Stegastes_partitus
ENSCSAG00000019007	-	100	95.833	ENSSSCG00000021652	LSM8	100	95.833	Sus_scrofa
ENSCSAG00000019007	-	100	92.708	ENSTGUG00000016823	-	100	92.708	Taeniopygia_guttata
ENSCSAG00000019007	-	100	93.750	ENSTGUG00000004730	-	100	93.750	Taeniopygia_guttata
ENSCSAG00000019007	-	100	89.583	ENSTRUG00000025192	lsm8	100	89.583	Takifugu_rubripes
ENSCSAG00000019007	-	100	89.583	ENSTNIG00000002864	lsm8	100	89.583	Tetraodon_nigroviridis
ENSCSAG00000019007	-	100	95.833	ENSTTRG00000001023	LSM8	100	95.833	Tursiops_truncatus
ENSCSAG00000019007	-	92	95.455	ENSUAMG00000006943	-	92	95.455	Ursus_americanus
ENSCSAG00000019007	-	92	95.455	ENSUMAG00000003073	LSM8	94	95.455	Ursus_maritimus
ENSCSAG00000019007	-	100	95.833	ENSVPAG00000001530	LSM8	100	95.833	Vicugna_pacos
ENSCSAG00000019007	-	78	94.667	ENSVVUG00000013248	-	82	94.667	Vulpes_vulpes
ENSCSAG00000019007	-	93	92.135	ENSXETG00000021829	lsm8	92	92.135	Xenopus_tropicalis
ENSCSAG00000019007	-	100	87.500	ENSXCOG00000012938	lsm8	100	87.500	Xiphophorus_couchianus
ENSCSAG00000019007	-	100	88.542	ENSXMAG00000025919	lsm8	100	88.542	Xiphophorus_maculatus