EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000019540 (Gene tree)
Gene ID: 103231708
Gene Symbol: DDX53
Alias: CAGE|CT26
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 1899 bases
Position: chrX:21481264-21483162
Accession: 103231708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000019039	KH_1	PF00013.29	6.3e-12	1	1
ENSCSAP00000019039	DEAD	PF00270.29	1.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000019630	DDX53-201	1899	-	ENSCSAP00000019039	632 (aa)	XP_007989478	A0A0D9SDV0

Gene Model

Click here to download ENSCSAG00000019540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000019540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000019540	DDX53	69	42.117	ENSCSAG00000006649	DDX17	67	42.117
ENSCSAG00000019540	DDX53	58	37.731	ENSCSAG00000016336	DDX4	51	37.731
ENSCSAG00000019540	DDX53	65	36.937	ENSCSAG00000006240	DDX23	53	37.079
ENSCSAG00000019540	DDX53	54	32.565	ENSCSAG00000002564	DDX6	70	32.565
ENSCSAG00000019540	DDX53	72	40.693	ENSCSAG00000004022	DDX5	73	40.693
ENSCSAG00000019540	DDX53	66	31.651	ENSCSAG00000006122	DDX52	72	31.416
ENSCSAG00000019540	DDX53	95	63.802	ENSCSAG00000013999	DDX43	93	63.802
ENSCSAG00000019540	DDX53	61	32.419	ENSCSAG00000013799	DDX59	63	32.419
ENSCSAG00000019540	DDX53	51	32.407	ENSCSAG00000009233	EIF4A2	88	32.407
ENSCSAG00000019540	DDX53	52	32.941	ENSCSAG00000005251	DDX49	69	32.941
ENSCSAG00000019540	DDX53	61	35.910	ENSCSAG00000018317	DDX3Y	61	35.910
ENSCSAG00000019540	DDX53	61	34.673	ENSCSAG00000008742	DDX41	63	34.673
ENSCSAG00000019540	DDX53	62	33.249	ENSCSAG00000008569	DDX47	85	33.249
ENSCSAG00000019540	DDX53	55	31.700	ENSCSAG00000011468	EIF4A1	84	31.700

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000019540	DDX53	99	89.984	ENSG00000184735	DDX53	99	89.984	Homo_sapiens
ENSCSAG00000019540	DDX53	99	80.573	ENSCCAG00000021534	-	100	80.573	Cebus_capucinus
ENSCSAG00000019540	DDX53	99	80.573	ENSCCAG00000024171	-	100	80.573	Cebus_capucinus
ENSCSAG00000019540	DDX53	99	88.394	ENSPPAG00000006869	DDX53	99	88.394	Pan_paniscus
ENSCSAG00000019540	DDX53	99	88.076	ENSPTRG00000028313	DDX53	99	88.076	Pan_troglodytes
ENSCSAG00000019540	DDX53	99	91.574	ENSPPYG00000020185	DDX53	100	91.574	Pongo_abelii