EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000000006 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
6946 bases
Position
chrreftig_451:45209-52154
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000000008RIO1PF01163.224.6e-0611
ENSCSAVP00000000006RIO1PF01163.225.5e-0611
ENSCSAVP00000000007RIO1PF01163.225.9e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000000006-951-ENSCSAVP00000000006317 (aa)-H2Y3V8
ENSCSAVT00000000007-987-ENSCSAVP00000000007329 (aa)-H2Y3V9
ENSCSAVT00000000008-816-ENSCSAVP00000000008272 (aa)-H2Y3W0
Gene Model
Click here to download ENSCSAVG00000000006's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000006's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000000006-7630.045ENSCSAVG00000003426-7930.045
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000000006-9961.905ENSAPOG00000022651-9758.125Acanthochromis_polyacanthus
ENSCSAVG00000000006-9962.637ENSACIG00000007967-9864.126Amphilophus_citrinellus
ENSCSAVG00000000006-9961.538ENSAPEG00000023702-9957.812Amphiprion_percula
ENSCSAVG00000000006-8097.248ENSCING00000000662-10097.248Ciona_intestinalis
ENSCSAVG00000000006-8161.712ENSCSEG00000005706-10061.333Cynoglossus_semilaevis
ENSCSAVG00000000006-8262.054ENSMAMG00000007306-9862.054Mastacembelus_armatus
ENSCSAVG00000000006-8167.873ENSMZEG00005019656-9967.873Maylandia_zebra
ENSCSAVG00000000006-9960.806ENSNBRG00000001226-6457.100Neolamprologus_brichardi
ENSCSAVG00000000006-9961.538ENSONIG00000011659-9257.704Oreochromis_niloticus
ENSCSAVG00000000006-7568.447ENSPMGG00000020544-8868.447Periophthalmus_magnuspinnatus
ENSCSAVG00000000006-8167.421ENSPNYG00000006499-9967.421Pundamilia_nyererei

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