EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000009 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1708 bases
Position: chrreftig_451:78466-80173
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000011	RNase_H	PF00075.24	5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000011	-	694	-	ENSCSAVP00000000011	231 (aa)	-	H2Y3W3

Gene Model

Click here to download ENSCSAVG00000000009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000009	-	96	38.565	ENSG00000171865	RNASEH1	76	38.565	Homo_sapiens
ENSCSAVG00000000009	-	96	39.738	ENSAPOG00000000412	rnaseh1	75	40.343	Acanthochromis_polyacanthus
ENSCSAVG00000000009	-	97	37.333	ENSAMEG00000018433	RNASEH1	76	37.333	Ailuropoda_melanoleuca
ENSCSAVG00000000009	-	96	37.607	ENSACIG00000014666	rnaseh1	73	39.056	Amphilophus_citrinellus
ENSCSAVG00000000009	-	96	38.428	ENSAOCG00000015210	rnaseh1	75	38.428	Amphiprion_ocellaris
ENSCSAVG00000000009	-	96	38.428	ENSAPEG00000014104	rnaseh1	75	38.428	Amphiprion_percula
ENSCSAVG00000000009	-	96	37.991	ENSATEG00000000598	rnaseh1	79	37.991	Anabas_testudineus
ENSCSAVG00000000009	-	91	38.073	ENSAPLG00000001961	RNASEH1	84	38.073	Anas_platyrhynchos
ENSCSAVG00000000009	-	95	35.573	ENSACAG00000016857	rnaseh1	78	35.573	Anolis_carolinensis
ENSCSAVG00000000009	-	96	37.778	ENSANAG00000024055	RNASEH1	76	37.778	Aotus_nancymaae
ENSCSAVG00000000009	-	96	36.820	ENSACLG00000006741	rnaseh1	74	37.607	Astatotilapia_calliptera
ENSCSAVG00000000009	-	94	39.726	ENSAMXG00000042940	rnaseh1	85	37.946	Astyanax_mexicanus
ENSCSAVG00000000009	-	96	39.035	ENSBTAG00000016235	RNASEH1	76	39.035	Bos_taurus
ENSCSAVG00000000009	-	95	35.455	WBGene00004382	rnh-1.0	79	35.455	Caenorhabditis_elegans
ENSCSAVG00000000009	-	96	36.134	ENSCJAG00000035450	RNASEH1	76	36.134	Callithrix_jacchus
ENSCSAVG00000000009	-	96	36.797	ENSCAFG00000003259	RNASEH1	75	36.797	Canis_familiaris
ENSCSAVG00000000009	-	96	38.288	ENSCHIG00000022264	-	75	38.288	Capra_hircus
ENSCSAVG00000000009	-	99	37.447	ENSTSYG00000012926	RNASEH1	78	37.447	Carlito_syrichta
ENSCSAVG00000000009	-	88	37.321	ENSCAPG00000004813	RNASEH1	81	37.321	Cavia_aperea
ENSCSAVG00000000009	-	96	38.496	ENSCPOG00000022278	Rnaseh1	73	38.496	Cavia_porcellus
ENSCSAVG00000000009	-	96	38.496	ENSCCAG00000038017	RNASEH1	76	38.496	Cebus_capucinus
ENSCSAVG00000000009	-	96	38.034	ENSCATG00000016515	-	76	38.034	Cercocebus_atys
ENSCSAVG00000000009	-	97	36.364	ENSCATG00000016818	-	76	36.364	Cercocebus_atys
ENSCSAVG00000000009	-	96	39.381	ENSCLAG00000002440	RNASEH1	75	39.381	Chinchilla_lanigera
ENSCSAVG00000000009	-	96	35.593	ENSCSAG00000006943	RNASEH1	76	35.593	Chlorocebus_sabaeus
ENSCSAVG00000000009	-	97	39.056	ENSCPBG00000021620	RNASEH1	84	39.130	Chrysemys_picta_bellii
ENSCSAVG00000000009	-	96	57.391	ENSCING00000014054	-	78	57.391	Ciona_intestinalis
ENSCSAVG00000000009	-	96	37.179	ENSCANG00000037763	RNASEH1	76	37.179	Colobus_angolensis_palliatus
ENSCSAVG00000000009	-	99	38.793	ENSCGRG00001008950	Rnaseh1	78	37.662	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000009	-	99	38.793	ENSCGRG00000006029	Rnaseh1	78	37.662	Cricetulus_griseus_crigri
ENSCSAVG00000000009	-	99	40.175	ENSCSEG00000005741	rnaseh1	81	37.500	Cynoglossus_semilaevis
ENSCSAVG00000000009	-	96	37.131	ENSCVAG00000018717	rnaseh1	74	37.131	Cyprinodon_variegatus
ENSCSAVG00000000009	-	96	36.522	ENSDARG00000042571	rnaseh1	94	36.522	Danio_rerio
ENSCSAVG00000000009	-	96	41.277	ENSDNOG00000016056	RNASEH1	75	41.277	Dasypus_novemcinctus
ENSCSAVG00000000009	-	97	39.130	ENSDORG00000000704	Rnaseh1	77	39.130	Dipodomys_ordii
ENSCSAVG00000000009	-	94	36.546	FBgn0023171	rnh1	78	36.546	Drosophila_melanogaster
ENSCSAVG00000000009	-	96	36.726	ENSETEG00000012674	RNASEH1	75	36.726	Echinops_telfairi
ENSCSAVG00000000009	-	95	35.628	ENSEBUG00000008898	rnaseh1	84	35.628	Eptatretus_burgeri
ENSCSAVG00000000009	-	96	34.842	ENSEBUG00000006116	rnaseh1	65	35.160	Eptatretus_burgeri
ENSCSAVG00000000009	-	99	38.017	ENSEASG00005022200	RNASEH1	77	38.017	Equus_asinus_asinus
ENSCSAVG00000000009	-	99	38.017	ENSECAG00000020695	RNASEH1	77	38.017	Equus_caballus
ENSCSAVG00000000009	-	96	38.197	ENSELUG00000010112	rnaseh1	77	38.197	Esox_lucius
ENSCSAVG00000000009	-	99	37.391	ENSFCAG00000025832	RNASEH1	78	37.391	Felis_catus
ENSCSAVG00000000009	-	95	37.759	ENSFALG00000002069	RNASEH1	78	37.759	Ficedula_albicollis
ENSCSAVG00000000009	-	96	40.265	ENSFDAG00000002035	RNASEH1	67	40.265	Fukomys_damarensis
ENSCSAVG00000000009	-	96	37.719	ENSGMOG00000013818	rnaseh1	74	37.719	Gadus_morhua
ENSCSAVG00000000009	-	95	39.738	ENSGALG00000016389	RNASEH1	77	39.738	Gallus_gallus
ENSCSAVG00000000009	-	96	38.197	ENSGAFG00000001776	rnaseh1	76	38.197	Gambusia_affinis
ENSCSAVG00000000009	-	96	38.428	ENSGACG00000011935	rnaseh1	75	38.428	Gasterosteus_aculeatus
ENSCSAVG00000000009	-	97	39.316	ENSGAGG00000009150	RNASEH1	53	39.316	Gopherus_agassizii
ENSCSAVG00000000009	-	96	35.484	ENSGGOG00000034822	RNASEH1	76	35.484	Gorilla_gorilla
ENSCSAVG00000000009	-	96	37.657	ENSHBUG00000004666	rnaseh1	74	38.462	Haplochromis_burtoni
ENSCSAVG00000000009	-	97	37.826	ENSHGLG00000002585	Rnaseh1	71	37.826	Heterocephalus_glaber_female
ENSCSAVG00000000009	-	97	37.826	ENSHGLG00100005105	Rnaseh1	71	37.826	Heterocephalus_glaber_male
ENSCSAVG00000000009	-	96	38.034	ENSHCOG00000012329	rnaseh1	75	38.034	Hippocampus_comes
ENSCSAVG00000000009	-	96	37.118	ENSIPUG00000023060	rnaseh1	81	37.118	Ictalurus_punctatus
ENSCSAVG00000000009	-	96	38.667	ENSSTOG00000012774	RNASEH1	80	38.197	Ictidomys_tridecemlineatus
ENSCSAVG00000000009	-	99	32.314	ENSJJAG00000021481	-	77	32.314	Jaculus_jaculus
ENSCSAVG00000000009	-	99	38.462	ENSJJAG00000020238	Rnaseh1	87	38.462	Jaculus_jaculus
ENSCSAVG00000000009	-	96	37.447	ENSKMAG00000001373	rnaseh1	74	37.447	Kryptolebias_marmoratus
ENSCSAVG00000000009	-	97	36.170	ENSLBEG00000004480	rnaseh1	80	37.118	Labrus_bergylta
ENSCSAVG00000000009	-	96	37.917	ENSLACG00000007100	RNASEH1	75	36.694	Latimeria_chalumnae
ENSCSAVG00000000009	-	98	38.136	ENSLOCG00000017212	rnaseh1	84	37.759	Lepisosteus_oculatus
ENSCSAVG00000000009	-	96	39.910	ENSLAFG00000015091	RNASEH1	75	39.910	Loxodonta_africana
ENSCSAVG00000000009	-	99	36.100	ENSMFAG00000002323	-	78	36.100	Macaca_fascicularis
ENSCSAVG00000000009	-	96	38.034	ENSMFAG00000000063	-	76	38.034	Macaca_fascicularis
ENSCSAVG00000000009	-	99	34.894	ENSMMUG00000019280	-	78	34.894	Macaca_mulatta
ENSCSAVG00000000009	-	96	38.034	ENSMNEG00000040183	-	76	38.034	Macaca_nemestrina
ENSCSAVG00000000009	-	99	34.894	ENSMNEG00000029676	-	78	34.894	Macaca_nemestrina
ENSCSAVG00000000009	-	96	35.294	ENSMLEG00000028662	-	75	35.294	Mandrillus_leucophaeus
ENSCSAVG00000000009	-	88	36.406	ENSMLEG00000039352	-	82	36.406	Mandrillus_leucophaeus
ENSCSAVG00000000009	-	96	36.481	ENSMAMG00000019725	rnaseh1	79	36.481	Mastacembelus_armatus
ENSCSAVG00000000009	-	96	36.820	ENSMZEG00005013006	rnaseh1	74	37.607	Maylandia_zebra
ENSCSAVG00000000009	-	83	37.619	ENSMGAG00000013979	RNASEH1	81	37.619	Meleagris_gallopavo
ENSCSAVG00000000009	-	98	37.190	ENSMAUG00000014957	Rnaseh1	78	37.190	Mesocricetus_auratus
ENSCSAVG00000000009	-	99	36.797	ENSMICG00000033156	RNASEH1	77	36.797	Microcebus_murinus
ENSCSAVG00000000009	-	99	37.975	ENSMOCG00000015522	Rnaseh1	78	37.975	Microtus_ochrogaster
ENSCSAVG00000000009	-	96	38.496	ENSMMOG00000015902	rnaseh1	75	38.496	Mola_mola
ENSCSAVG00000000009	-	88	33.488	ENSMODG00000028814	-	80	33.488	Monodelphis_domestica
ENSCSAVG00000000009	-	99	36.752	ENSMODG00000014491	-	77	36.752	Monodelphis_domestica
ENSCSAVG00000000009	-	96	39.111	ENSMALG00000010565	rnaseh1	75	37.168	Monopterus_albus
ENSCSAVG00000000009	-	100	37.447	MGP_CAROLIEiJ_G0017660	Rnaseh1	79	37.447	Mus_caroli
ENSCSAVG00000000009	-	100	37.447	ENSMUSG00000020630	Rnaseh1	79	37.447	Mus_musculus
ENSCSAVG00000000009	-	99	38.197	MGP_PahariEiJ_G0029418	Rnaseh1	78	38.528	Mus_pahari
ENSCSAVG00000000009	-	100	39.056	MGP_SPRETEiJ_G0018502	Rnaseh1	79	39.056	Mus_spretus
ENSCSAVG00000000009	-	99	36.626	ENSNGAG00000015966	Rnaseh1	73	36.626	Nannospalax_galili
ENSCSAVG00000000009	-	96	37.657	ENSNBRG00000008739	rnaseh1	74	38.462	Neolamprologus_brichardi
ENSCSAVG00000000009	-	84	37.561	ENSNLEG00000015400	RNASEH1	78	37.561	Nomascus_leucogenys
ENSCSAVG00000000009	-	97	35.841	ENSNLEG00000000059	-	82	35.841	Nomascus_leucogenys
ENSCSAVG00000000009	-	87	33.180	ENSMEUG00000003610	-	67	33.180	Notamacropus_eugenii
ENSCSAVG00000000009	-	95	36.481	ENSOPRG00000005072	RNASEH1	75	36.481	Ochotona_princeps
ENSCSAVG00000000009	-	99	37.712	ENSODEG00000000235	Rnaseh1	78	37.712	Octodon_degus
ENSCSAVG00000000009	-	96	37.179	ENSONIG00000018697	rnaseh1	82	37.179	Oreochromis_niloticus
ENSCSAVG00000000009	-	96	39.013	ENSOCUG00000006117	RNASEH1	76	39.013	Oryctolagus_cuniculus
ENSCSAVG00000000009	-	96	40.870	ENSORLG00000018127	rnaseh1	80	40.417	Oryzias_latipes
ENSCSAVG00000000009	-	96	40.870	ENSORLG00020013660	rnaseh1	74	40.417	Oryzias_latipes_hni
ENSCSAVG00000000009	-	96	40.870	ENSORLG00015011338	rnaseh1	74	40.417	Oryzias_latipes_hsok
ENSCSAVG00000000009	-	96	36.325	ENSOMEG00000004710	rnaseh1	83	36.325	Oryzias_melastigma
ENSCSAVG00000000009	-	96	38.261	ENSOGAG00000017176	RNASEH1	76	38.261	Otolemur_garnettii
ENSCSAVG00000000009	-	86	39.196	ENSOARG00000005386	RNASEH1	66	39.196	Ovis_aries
ENSCSAVG00000000009	-	96	38.565	ENSPPAG00000034221	RNASEH1	76	38.565	Pan_paniscus
ENSCSAVG00000000009	-	99	37.826	ENSPPRG00000015513	RNASEH1	78	37.826	Panthera_pardus
ENSCSAVG00000000009	-	89	36.893	ENSPTIG00000019034	RNASEH1	70	36.893	Panthera_tigris_altaica
ENSCSAVG00000000009	-	99	32.751	ENSPTRG00000043403	-	85	32.751	Pan_troglodytes
ENSCSAVG00000000009	-	96	38.565	ENSPTRG00000011614	RNASEH1	76	38.565	Pan_troglodytes
ENSCSAVG00000000009	-	96	38.034	ENSPANG00000000443	RNASEH1	82	36.986	Papio_anubis
ENSCSAVG00000000009	-	96	35.242	ENSPANG00000018246	-	78	35.242	Papio_anubis
ENSCSAVG00000000009	-	96	36.564	ENSPKIG00000003146	rnaseh1	82	36.564	Paramormyrops_kingsleyae
ENSCSAVG00000000009	-	96	38.889	ENSPSIG00000002937	RNASEH1	84	38.889	Pelodiscus_sinensis
ENSCSAVG00000000009	-	96	36.199	ENSPMGG00000017463	rnaseh1	77	33.482	Periophthalmus_magnuspinnatus
ENSCSAVG00000000009	-	99	37.768	ENSPEMG00000022465	-	78	39.207	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000009	-	51	33.051	ENSPCIG00000026047	-	63	33.051	Phascolarctos_cinereus
ENSCSAVG00000000009	-	99	36.681	ENSPCIG00000023334	-	77	36.681	Phascolarctos_cinereus
ENSCSAVG00000000009	-	96	37.768	ENSPFOG00000002841	rnaseh1	76	37.768	Poecilia_formosa
ENSCSAVG00000000009	-	71	39.286	ENSPLAG00000021349	-	65	39.286	Poecilia_latipinna
ENSCSAVG00000000009	-	96	37.768	ENSPMEG00000016826	rnaseh1	76	37.768	Poecilia_mexicana
ENSCSAVG00000000009	-	96	36.402	ENSPREG00000012197	rnaseh1	76	36.402	Poecilia_reticulata
ENSCSAVG00000000009	-	96	35.217	ENSPPYG00000008067	-	83	35.217	Pongo_abelii
ENSCSAVG00000000009	-	95	33.790	ENSPPYG00000025873	RNASEH1	71	33.790	Pongo_abelii
ENSCSAVG00000000009	-	96	38.627	ENSPCAG00000002500	RNASEH1	75	38.627	Procavia_capensis
ENSCSAVG00000000009	-	99	30.736	ENSPCOG00000019444	RNASEH1	76	30.736	Propithecus_coquereli
ENSCSAVG00000000009	-	96	39.381	ENSPVAG00000002070	RNASEH1	75	39.381	Pteropus_vampyrus
ENSCSAVG00000000009	-	96	37.238	ENSPNYG00000001292	rnaseh1	74	38.034	Pundamilia_nyererei
ENSCSAVG00000000009	-	96	38.261	ENSPNAG00000022344	rnaseh1	75	38.261	Pygocentrus_nattereri
ENSCSAVG00000000009	-	99	38.627	ENSRNOG00000008584	Rnaseh1	78	38.961	Rattus_norvegicus
ENSCSAVG00000000009	-	96	36.555	ENSRBIG00000034222	RNASEH1	75	36.555	Rhinopithecus_bieti
ENSCSAVG00000000009	-	96	36.555	ENSRROG00000041761	RNASEH1	75	36.555	Rhinopithecus_roxellana
ENSCSAVG00000000009	-	90	44.000	YMR234W	-	64	44.000	Saccharomyces_cerevisiae
ENSCSAVG00000000009	-	96	38.053	ENSSBOG00000025411	RNASEH1	76	38.053	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000009	-	96	39.556	ENSSHAG00000013051	RNASEH1	73	39.556	Sarcophilus_harrisii
ENSCSAVG00000000009	-	96	38.009	ENSSFOG00015002709	rnaseh1	77	36.325	Scleropages_formosus
ENSCSAVG00000000009	-	96	38.462	ENSSMAG00000007586	rnaseh1	74	38.865	Scophthalmus_maximus
ENSCSAVG00000000009	-	96	36.444	ENSSDUG00000008217	rnaseh1	79	37.118	Seriola_dumerili
ENSCSAVG00000000009	-	88	34.419	ENSSLDG00000000442	rnaseh1	78	35.484	Seriola_lalandi_dorsalis
ENSCSAVG00000000009	-	96	40.000	ENSSPUG00000006644	RNASEH1	78	40.000	Sphenodon_punctatus
ENSCSAVG00000000009	-	96	37.991	ENSSPAG00000009353	rnaseh1	74	38.428	Stegastes_partitus
ENSCSAVG00000000009	-	96	36.726	ENSSSCG00000025305	RNASEH1	75	36.726	Sus_scrofa
ENSCSAVG00000000009	-	97	37.344	ENSTGUG00000012980	RNASEH1	79	37.344	Taeniopygia_guttata
ENSCSAVG00000000009	-	96	37.391	ENSTRUG00000015774	rnaseh1	81	37.391	Takifugu_rubripes
ENSCSAVG00000000009	-	96	38.528	ENSTNIG00000010715	rnaseh1	80	38.528	Tetraodon_nigroviridis
ENSCSAVG00000000009	-	99	34.156	ENSTTRG00000001615	RNASEH1	78	34.156	Tursiops_truncatus
ENSCSAVG00000000009	-	88	36.098	ENSUMAG00000003941	RNASEH1	66	36.098	Ursus_maritimus
ENSCSAVG00000000009	-	86	38.614	ENSVPAG00000011589	RNASEH1	67	38.614	Vicugna_pacos
ENSCSAVG00000000009	-	96	37.500	ENSVVUG00000008633	RNASEH1	67	37.500	Vulpes_vulpes
ENSCSAVG00000000009	-	70	48.837	ENSXETG00000030371	-	79	48.837	Xenopus_tropicalis
ENSCSAVG00000000009	-	96	34.167	ENSXETG00000001212	rnaseh1	79	48.837	Xenopus_tropicalis
ENSCSAVG00000000009	-	96	37.339	ENSXMAG00000002357	rnaseh1	76	37.339	Xiphophorus_maculatus