EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000028 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 9019 bases
Position: chrreftig_219:187047-196065
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000059	MMR_HSR1	PF01926.23	2.6e-08	1	1
ENSCSAVP00000000058	MMR_HSR1	PF01926.23	2.7e-08	1	1
ENSCSAVP00000000060	MMR_HSR1	PF01926.23	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000059	-	2383	-	ENSCSAVP00000000058	550 (aa)	-	H2Y410
ENSCSAVT00000000061	-	1566	-	ENSCSAVP00000000060	522 (aa)	-	H2Y412
ENSCSAVT00000000060	-	1524	-	ENSCSAVP00000000059	508 (aa)	-	H2Y411

Gene Model

Click here to download ENSCSAVG00000000028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000028	-	98	63.956	ENSG00000103966	EHD4	98	63.956	Homo_sapiens
ENSCSAVG00000000028	-	100	64.674	ENSAPOG00000004967	ehd4	86	64.674	Acanthochromis_polyacanthus
ENSCSAVG00000000028	-	98	64.510	ENSAMEG00000016343	EHD4	98	64.510	Ailuropoda_melanoleuca
ENSCSAVG00000000028	-	100	65.036	ENSAPEG00000013326	ehd4	99	65.036	Amphiprion_percula
ENSCSAVG00000000028	-	100	64.855	ENSATEG00000015573	ehd4	99	64.855	Anabas_testudineus
ENSCSAVG00000000028	-	96	64.896	ENSAPLG00000008924	EHD4	94	63.370	Anas_platyrhynchos
ENSCSAVG00000000028	-	98	63.670	ENSACAG00000014864	EHD4	98	63.670	Anolis_carolinensis
ENSCSAVG00000000028	-	98	63.853	ENSANAG00000033562	EHD4	99	63.853	Aotus_nancymaae
ENSCSAVG00000000028	-	100	65.580	ENSACLG00000017182	ehd4	99	65.580	Astatotilapia_calliptera
ENSCSAVG00000000028	-	98	65.930	ENSAMXG00000008348	ehd4	98	65.930	Astyanax_mexicanus
ENSCSAVG00000000028	-	98	63.603	ENSBTAG00000006792	EHD4	99	63.603	Bos_taurus
ENSCSAVG00000000028	-	98	64.037	ENSCJAG00000020657	EHD4	99	64.037	Callithrix_jacchus
ENSCSAVG00000000028	-	98	64.140	ENSCAFG00000009869	EHD4	98	64.140	Canis_familiaris
ENSCSAVG00000000028	-	98	64.140	ENSCAFG00020004728	EHD4	98	64.140	Canis_lupus_dingo
ENSCSAVG00000000028	-	98	63.787	ENSCHIG00000025291	EHD4	99	63.787	Capra_hircus
ENSCSAVG00000000028	-	98	64.510	ENSTSYG00000028107	EHD4	98	64.510	Carlito_syrichta
ENSCSAVG00000000028	-	98	64.037	ENSCCAG00000030886	EHD4	99	64.037	Cebus_capucinus
ENSCSAVG00000000028	-	98	64.140	ENSCATG00000034221	EHD4	98	64.140	Cercocebus_atys
ENSCSAVG00000000028	-	98	64.140	ENSCSAG00000008190	EHD4	98	64.140	Chlorocebus_sabaeus
ENSCSAVG00000000028	-	97	60.456	ENSCPBG00000011098	EHD4	99	62.429	Chrysemys_picta_bellii
ENSCSAVG00000000028	-	99	91.513	ENSCING00000023326	-	99	91.852	Ciona_intestinalis
ENSCSAVG00000000028	-	98	64.510	ENSCGRG00001024863	Ehd4	98	64.510	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000028	-	94	66.281	ENSCGRG00000007631	Ehd4	99	66.281	Cricetulus_griseus_crigri
ENSCSAVG00000000028	-	99	64.663	ENSCSEG00000011195	ehd4	79	64.493	Cynoglossus_semilaevis
ENSCSAVG00000000028	-	100	64.855	ENSCVAG00000006962	ehd4	99	64.855	Cyprinodon_variegatus
ENSCSAVG00000000028	-	98	65.930	ENSDARG00000054302	ehd4	87	65.930	Danio_rerio
ENSCSAVG00000000028	-	98	65.065	ENSDNOG00000037551	EHD4	98	65.065	Dasypus_novemcinctus
ENSCSAVG00000000028	-	98	64.325	ENSEASG00005015157	EHD4	99	64.325	Equus_asinus_asinus
ENSCSAVG00000000028	-	98	64.325	ENSECAG00000017216	EHD4	99	64.325	Equus_caballus
ENSCSAVG00000000028	-	98	64.510	ENSEEUG00000009114	EHD4	98	64.510	Erinaceus_europaeus
ENSCSAVG00000000028	-	100	62.107	ENSELUG00000004390	ehd4	98	64.088	Esox_lucius
ENSCSAVG00000000028	-	98	64.695	ENSFCAG00000040964	EHD4	98	64.695	Felis_catus
ENSCSAVG00000000028	-	88	64.803	ENSFALG00000005954	EHD4	99	64.803	Ficedula_albicollis
ENSCSAVG00000000028	-	88	65.839	ENSFDAG00000015044	EHD4	99	65.839	Fukomys_damarensis
ENSCSAVG00000000028	-	96	65.465	ENSGALG00000008950	EHD4	99	63.919	Gallus_gallus
ENSCSAVG00000000028	-	100	64.855	ENSGAFG00000007267	ehd4	98	65.625	Gambusia_affinis
ENSCSAVG00000000028	-	100	61.029	ENSGAGG00000020474	EHD4	99	62.637	Gopherus_agassizii
ENSCSAVG00000000028	-	98	63.956	ENSGGOG00000011817	EHD4	98	63.956	Gorilla_gorilla
ENSCSAVG00000000028	-	100	65.580	ENSHBUG00000016153	ehd4	99	65.580	Haplochromis_burtoni
ENSCSAVG00000000028	-	98	63.586	ENSHGLG00000016918	EHD4	98	63.586	Heterocephalus_glaber_female
ENSCSAVG00000000028	-	100	64.674	ENSHCOG00000021219	ehd4	99	64.674	Hippocampus_comes
ENSCSAVG00000000028	-	98	65.378	ENSIPUG00000018207	ehd4	98	65.378	Ictalurus_punctatus
ENSCSAVG00000000028	-	98	64.140	ENSSTOG00000000719	EHD4	98	64.140	Ictidomys_tridecemlineatus
ENSCSAVG00000000028	-	100	65.036	ENSLBEG00000020127	ehd4	99	65.036	Labrus_bergylta
ENSCSAVG00000000028	-	98	65.625	ENSLACG00000017804	EHD4	90	66.360	Latimeria_chalumnae
ENSCSAVG00000000028	-	98	65.009	ENSLOCG00000009774	ehd4	97	65.009	Lepisosteus_oculatus
ENSCSAVG00000000028	-	98	64.140	ENSMFAG00000042599	EHD4	98	64.140	Macaca_fascicularis
ENSCSAVG00000000028	-	98	64.140	ENSMMUG00000003846	EHD4	98	64.140	Macaca_mulatta
ENSCSAVG00000000028	-	98	64.140	ENSMNEG00000031951	EHD4	98	64.140	Macaca_nemestrina
ENSCSAVG00000000028	-	100	65.399	ENSMAMG00000000024	ehd4	99	65.399	Mastacembelus_armatus
ENSCSAVG00000000028	-	100	65.580	ENSMZEG00005024022	ehd4	99	65.580	Maylandia_zebra
ENSCSAVG00000000028	-	100	65.580	ENSMZEG00005004542	-	99	65.580	Maylandia_zebra
ENSCSAVG00000000028	-	98	64.510	ENSMAUG00000020399	Ehd4	98	64.510	Mesocricetus_auratus
ENSCSAVG00000000028	-	98	63.670	ENSMICG00000034027	EHD4	99	63.670	Microcebus_murinus
ENSCSAVG00000000028	-	98	63.670	ENSMOCG00000010893	Ehd4	99	63.670	Microtus_ochrogaster
ENSCSAVG00000000028	-	100	64.312	ENSMMOG00000013306	ehd4	99	64.312	Mola_mola
ENSCSAVG00000000028	-	98	63.956	ENSMODG00000017946	EHD4	98	63.956	Monodelphis_domestica
ENSCSAVG00000000028	-	100	64.674	ENSMALG00000005796	ehd4	99	64.674	Monopterus_albus
ENSCSAVG00000000028	-	98	64.325	MGP_CAROLIEiJ_G0024161	Ehd4	98	64.325	Mus_caroli
ENSCSAVG00000000028	-	98	64.325	ENSMUSG00000027293	Ehd4	98	64.325	Mus_musculus
ENSCSAVG00000000028	-	98	64.140	MGP_PahariEiJ_G0025603	Ehd4	98	64.140	Mus_pahari
ENSCSAVG00000000028	-	98	64.325	MGP_SPRETEiJ_G0025077	Ehd4	98	64.325	Mus_spretus
ENSCSAVG00000000028	-	98	64.325	ENSMPUG00000009546	EHD4	98	64.325	Mustela_putorius_furo
ENSCSAVG00000000028	-	98	64.510	ENSMLUG00000011689	EHD4	98	64.510	Myotis_lucifugus
ENSCSAVG00000000028	-	98	64.695	ENSNGAG00000004194	Ehd4	98	64.695	Nannospalax_galili
ENSCSAVG00000000028	-	100	65.036	ENSNBRG00000022623	ehd4	99	65.036	Neolamprologus_brichardi
ENSCSAVG00000000028	-	70	68.665	ENSMEUG00000006980	EHD4	99	68.665	Notamacropus_eugenii
ENSCSAVG00000000028	-	98	64.140	ENSODEG00000016665	EHD4	99	64.140	Octodon_degus
ENSCSAVG00000000028	-	100	65.399	ENSONIG00000001849	ehd4	99	65.399	Oreochromis_niloticus
ENSCSAVG00000000028	-	98	64.510	ENSOCUG00000015759	EHD4	98	64.510	Oryctolagus_cuniculus
ENSCSAVG00000000028	-	98	65.009	ENSORLG00000010433	ehd4	98	65.009	Oryzias_latipes
ENSCSAVG00000000028	-	98	65.009	ENSORLG00020001245	ehd4	98	65.009	Oryzias_latipes_hni
ENSCSAVG00000000028	-	98	64.825	ENSORLG00015020872	ehd4	98	64.825	Oryzias_latipes_hsok
ENSCSAVG00000000028	-	98	65.009	ENSOMEG00000019758	ehd4	98	65.009	Oryzias_melastigma
ENSCSAVG00000000028	-	98	64.404	ENSOGAG00000016070	EHD4	99	64.404	Otolemur_garnettii
ENSCSAVG00000000028	-	98	63.603	ENSOARG00000020458	EHD4	99	63.603	Ovis_aries
ENSCSAVG00000000028	-	98	63.956	ENSPPAG00000042014	EHD4	98	63.956	Pan_paniscus
ENSCSAVG00000000028	-	98	64.695	ENSPPRG00000013283	EHD4	98	64.695	Panthera_pardus
ENSCSAVG00000000028	-	96	65.784	ENSPTIG00000021127	EHD4	99	65.784	Panthera_tigris_altaica
ENSCSAVG00000000028	-	98	64.140	ENSPTRG00000006964	EHD4	98	64.140	Pan_troglodytes
ENSCSAVG00000000028	-	98	64.140	ENSPANG00000018707	EHD4	98	64.140	Papio_anubis
ENSCSAVG00000000028	-	77	66.981	ENSPMGG00000013623	ehd4	99	66.981	Periophthalmus_magnuspinnatus
ENSCSAVG00000000028	-	98	64.695	ENSPEMG00000015332	Ehd4	98	64.695	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000028	-	98	64.325	ENSPCIG00000018367	EHD4	98	64.325	Phascolarctos_cinereus
ENSCSAVG00000000028	-	100	65.036	ENSPFOG00000018511	ehd4	99	65.036	Poecilia_formosa
ENSCSAVG00000000028	-	100	65.036	ENSPLAG00000003565	ehd4	99	65.036	Poecilia_latipinna
ENSCSAVG00000000028	-	100	65.036	ENSPMEG00000017519	ehd4	99	65.036	Poecilia_mexicana
ENSCSAVG00000000028	-	100	65.036	ENSPREG00000003513	ehd4	99	65.036	Poecilia_reticulata
ENSCSAVG00000000028	-	98	63.956	ENSPPYG00000006387	EHD4	98	63.956	Pongo_abelii
ENSCSAVG00000000028	-	98	64.140	ENSPCAG00000014068	EHD4	98	64.140	Procavia_capensis
ENSCSAVG00000000028	-	98	64.220	ENSPCOG00000023830	EHD4	99	64.220	Propithecus_coquereli
ENSCSAVG00000000028	-	77	65.258	ENSPVAG00000013749	EHD4	77	65.258	Pteropus_vampyrus
ENSCSAVG00000000028	-	100	65.580	ENSPNYG00000013916	ehd4	99	65.580	Pundamilia_nyererei
ENSCSAVG00000000028	-	100	65.942	ENSPNAG00000019307	ehd4	99	65.942	Pygocentrus_nattereri
ENSCSAVG00000000028	-	98	64.510	ENSRNOG00000007584	Ehd4	98	64.510	Rattus_norvegicus
ENSCSAVG00000000028	-	98	64.140	ENSRBIG00000040681	EHD4	98	64.140	Rhinopithecus_bieti
ENSCSAVG00000000028	-	98	64.140	ENSRROG00000034638	EHD4	98	64.140	Rhinopithecus_roxellana
ENSCSAVG00000000028	-	98	64.037	ENSSBOG00000035819	EHD4	99	64.037	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000028	-	94	63.137	ENSSHAG00000007926	-	99	63.477	Sarcophilus_harrisii
ENSCSAVG00000000028	-	100	64.791	ENSSMAG00000002935	ehd4	99	64.791	Scophthalmus_maximus
ENSCSAVG00000000028	-	100	65.036	ENSSDUG00000010947	ehd4	99	65.036	Seriola_dumerili
ENSCSAVG00000000028	-	100	65.036	ENSSLDG00000020986	ehd4	99	65.036	Seriola_lalandi_dorsalis
ENSCSAVG00000000028	-	98	63.419	ENSSPUG00000004459	EHD4	99	63.419	Sphenodon_punctatus
ENSCSAVG00000000028	-	100	61.413	ENSSPAG00000005490	ehd4	99	61.413	Stegastes_partitus
ENSCSAVG00000000028	-	98	64.325	ENSSSCG00000020666	EHD4	98	64.325	Sus_scrofa
ENSCSAVG00000000028	-	96	64.137	ENSTGUG00000010994	EHD4	99	62.936	Taeniopygia_guttata
ENSCSAVG00000000028	-	100	63.949	ENSTRUG00000022398	ehd4	99	63.949	Takifugu_rubripes
ENSCSAVG00000000028	-	98	64.706	ENSTNIG00000004842	ehd4	98	64.706	Tetraodon_nigroviridis
ENSCSAVG00000000028	-	98	64.220	ENSTTRG00000002551	EHD4	99	64.220	Tursiops_truncatus
ENSCSAVG00000000028	-	98	64.140	ENSUMAG00000011183	EHD4	98	64.140	Ursus_maritimus
ENSCSAVG00000000028	-	98	64.140	ENSVVUG00000026933	EHD4	98	64.140	Vulpes_vulpes
ENSCSAVG00000000028	-	98	62.662	ENSXETG00000015794	ehd4	99	63.401	Xenopus_tropicalis
ENSCSAVG00000000028	-	100	65.217	ENSXMAG00000021228	EHD4	99	65.217	Xiphophorus_maculatus