EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000030 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 22047 bases
Position: chrreftig_56:151827-173873
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000067	KOW	PF00467.29	7.7e-25	1	2
ENSCSAVP00000000067	KOW	PF00467.29	7.7e-25	2	2
ENSCSAVP00000000064	KOW	PF00467.29	7.5e-24	1	2
ENSCSAVP00000000064	KOW	PF00467.29	7.5e-24	2	2
ENSCSAVP00000000066	KOW	PF00467.29	1.2e-23	1	2
ENSCSAVP00000000066	KOW	PF00467.29	1.2e-23	2	2
ENSCSAVP00000000063	KOW	PF00467.29	1.2e-23	1	2
ENSCSAVP00000000063	KOW	PF00467.29	1.2e-23	2	2
ENSCSAVP00000000068	KOW	PF00467.29	3.2e-21	1	2
ENSCSAVP00000000068	KOW	PF00467.29	3.2e-21	2	2
ENSCSAVP00000000069	KOW	PF00467.29	1.8e-17	1	1
ENSCSAVP00000000065	KOW	PF00467.29	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000070	-	3327	-	ENSCSAVP00000000069	1109 (aa)	-	H2Y421
ENSCSAVT00000000066	-	2718	-	ENSCSAVP00000000065	906 (aa)	-	H2Y417
ENSCSAVT00000000067	-	3252	-	ENSCSAVP00000000066	1084 (aa)	-	H2Y418
ENSCSAVT00000000064	-	3902	-	ENSCSAVP00000000063	1089 (aa)	-	H2Y415
ENSCSAVT00000000065	-	3057	-	ENSCSAVP00000000064	1019 (aa)	-	H2Y416
ENSCSAVT00000000068	-	2589	-	ENSCSAVP00000000067	863 (aa)	-	H2Y419
ENSCSAVT00000000069	-	2691	-	ENSCSAVP00000000068	897 (aa)	-	H2Y420

Gene Model

Click here to download ENSCSAVG00000000030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000030	-	99	61.317	ENSG00000196235	SUPT5H	99	71.901	Homo_sapiens
ENSCSAVG00000000030	-	99	56.263	ENSAPOG00000012970	supt5h	98	56.473	Acanthochromis_polyacanthus
ENSCSAVG00000000030	-	99	59.275	ENSAMEG00000008382	SUPT5H	99	61.392	Ailuropoda_melanoleuca
ENSCSAVG00000000030	-	99	51.856	ENSACIG00000021245	supt5h	99	60.637	Amphilophus_citrinellus
ENSCSAVG00000000030	-	99	58.521	ENSAOCG00000001136	supt5h	99	58.580	Amphiprion_ocellaris
ENSCSAVG00000000030	-	99	57.234	ENSAPEG00000021060	supt5h	98	57.156	Amphiprion_percula
ENSCSAVG00000000030	-	99	59.144	ENSATEG00000002626	supt5h	99	60.018	Anabas_testudineus
ENSCSAVG00000000030	-	99	59.378	ENSACAG00000000375	SUPT5H	99	61.357	Anolis_carolinensis
ENSCSAVG00000000030	-	99	58.999	ENSANAG00000033469	SUPT5H	99	61.121	Aotus_nancymaae
ENSCSAVG00000000030	-	99	58.387	ENSACLG00000011374	supt5h	97	58.934	Astatotilapia_calliptera
ENSCSAVG00000000030	-	99	59.295	ENSAMXG00000009128	supt5h	99	61.046	Astyanax_mexicanus
ENSCSAVG00000000030	-	99	59.425	ENSBTAG00000010467	SUPT5H	99	61.483	Bos_taurus
ENSCSAVG00000000030	-	90	46.547	WBGene00005015	spt-5	96	41.684	Caenorhabditis_elegans
ENSCSAVG00000000030	-	99	58.999	ENSCJAG00000014182	SUPT5H	99	61.121	Callithrix_jacchus
ENSCSAVG00000000030	-	99	59.212	ENSCAFG00000005469	SUPT5H	99	61.337	Canis_familiaris
ENSCSAVG00000000030	-	99	58.511	ENSCAFG00020015732	SUPT5H	99	62.123	Canis_lupus_dingo
ENSCSAVG00000000030	-	99	59.378	ENSCHIG00000023821	SUPT5H	99	61.392	Capra_hircus
ENSCSAVG00000000030	-	99	58.591	ENSTSYG00000010636	SUPT5H	97	61.173	Carlito_syrichta
ENSCSAVG00000000030	-	99	58.360	ENSCAPG00000008285	SUPT5H	99	60.186	Cavia_aperea
ENSCSAVG00000000030	-	95	64.946	ENSCPOG00000011367	SUPT5H	99	60.995	Cavia_porcellus
ENSCSAVG00000000030	-	99	58.999	ENSCCAG00000034052	SUPT5H	99	61.121	Cebus_capucinus
ENSCSAVG00000000030	-	99	59.212	ENSCATG00000035589	SUPT5H	99	61.302	Cercocebus_atys
ENSCSAVG00000000030	-	99	58.679	ENSCLAG00000013796	SUPT5H	99	60.995	Chinchilla_lanigera
ENSCSAVG00000000030	-	99	59.212	ENSCSAG00000003826	SUPT5H	99	61.302	Chlorocebus_sabaeus
ENSCSAVG00000000030	-	99	59.914	ENSCPBG00000018792	SUPT5H	100	62.215	Chrysemys_picta_bellii
ENSCSAVG00000000030	-	94	86.230	ENSCING00000021624	-	100	86.515	Ciona_intestinalis
ENSCSAVG00000000030	-	99	59.212	ENSCANG00000043752	SUPT5H	99	61.302	Colobus_angolensis_palliatus
ENSCSAVG00000000030	-	99	58.591	ENSCGRG00001012522	Supt5	99	60.705	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000030	-	99	58.591	ENSCGRG00000006779	Supt5	96	61.395	Cricetulus_griseus_crigri
ENSCSAVG00000000030	-	99	56.757	ENSCSEG00000015699	supt5h	99	56.929	Cynoglossus_semilaevis
ENSCSAVG00000000030	-	77	55.407	ENSCSEG00000017151	-	93	53.816	Cynoglossus_semilaevis
ENSCSAVG00000000030	-	99	58.930	ENSCVAG00000007501	supt5h	99	60.036	Cyprinodon_variegatus
ENSCSAVG00000000030	-	99	59.318	ENSDARG00000042724	supt5h	99	60.179	Danio_rerio
ENSCSAVG00000000030	-	95	58.047	ENSDNOG00000033920	SUPT5H	100	60.581	Dasypus_novemcinctus
ENSCSAVG00000000030	-	99	59.227	ENSDORG00000016582	Supt5	99	59.341	Dipodomys_ordii
ENSCSAVG00000000030	-	99	50.610	FBgn0040273	Spt5	93	49.424	Drosophila_melanogaster
ENSCSAVG00000000030	-	63	64.474	ENSETEG00000009497	-	52	67.054	Echinops_telfairi
ENSCSAVG00000000030	-	99	56.526	ENSEBUG00000011892	supt5h	100	59.980	Eptatretus_burgeri
ENSCSAVG00000000030	-	99	59.105	ENSEASG00005011861	SUPT5H	99	62.843	Equus_asinus_asinus
ENSCSAVG00000000030	-	99	59.105	ENSECAG00000013309	SUPT5H	99	62.552	Equus_caballus
ENSCSAVG00000000030	-	98	57.500	ENSEEUG00000012879	SUPT5H	96	56.827	Erinaceus_europaeus
ENSCSAVG00000000030	-	99	60.838	ENSELUG00000011402	supt5h	99	60.376	Esox_lucius
ENSCSAVG00000000030	-	99	59.212	ENSFCAG00000010744	SUPT5H	99	61.302	Felis_catus
ENSCSAVG00000000030	-	99	58.786	ENSFDAG00000015803	SUPT5H	99	61.302	Fukomys_damarensis
ENSCSAVG00000000030	-	99	59.465	ENSFHEG00000012497	supt5h	97	60.038	Fundulus_heteroclitus
ENSCSAVG00000000030	-	99	55.063	ENSGMOG00000003422	supt5h	99	52.755	Gadus_morhua
ENSCSAVG00000000030	-	99	55.217	ENSGACG00000004934	supt5h	99	54.987	Gasterosteus_aculeatus
ENSCSAVG00000000030	-	99	60.832	ENSGAGG00000019112	SUPT5H	99	62.804	Gopherus_agassizii
ENSCSAVG00000000030	-	99	59.212	ENSGGOG00000014425	SUPT5H	99	61.126	Gorilla_gorilla
ENSCSAVG00000000030	-	99	59.655	ENSHBUG00000017144	supt5h	99	59.840	Haplochromis_burtoni
ENSCSAVG00000000030	-	99	59.300	ENSHGLG00000018339	SUPT5H	99	61.156	Heterocephalus_glaber_female
ENSCSAVG00000000030	-	99	59.126	ENSHGLG00100017126	SUPT5H	99	60.488	Heterocephalus_glaber_male
ENSCSAVG00000000030	-	99	58.137	ENSHCOG00000004932	supt5h	99	58.908	Hippocampus_comes
ENSCSAVG00000000030	-	99	59.829	ENSIPUG00000007308	supt5h	99	60.590	Ictalurus_punctatus
ENSCSAVG00000000030	-	99	58.786	ENSSTOG00000026638	SUPT5H	99	60.850	Ictidomys_tridecemlineatus
ENSCSAVG00000000030	-	99	59.537	ENSJJAG00000022374	Supt5	99	61.066	Jaculus_jaculus
ENSCSAVG00000000030	-	99	58.199	ENSKMAG00000004401	supt5h	99	58.506	Kryptolebias_marmoratus
ENSCSAVG00000000030	-	99	60.064	ENSLACG00000008663	SUPT5H	100	60.921	Latimeria_chalumnae
ENSCSAVG00000000030	-	90	56.556	ENSLOCG00000014703	SUPT5H	93	87.097	Lepisosteus_oculatus
ENSCSAVG00000000030	-	95	65.429	ENSLAFG00000027736	SUPT5H	99	59.313	Loxodonta_africana
ENSCSAVG00000000030	-	99	59.212	ENSMFAG00000038707	SUPT5H	99	61.302	Macaca_fascicularis
ENSCSAVG00000000030	-	99	59.212	ENSMMUG00000019372	SUPT5H	99	61.302	Macaca_mulatta
ENSCSAVG00000000030	-	99	59.212	ENSMNEG00000041553	SUPT5H	99	61.302	Macaca_nemestrina
ENSCSAVG00000000030	-	99	59.613	ENSMLEG00000036432	SUPT5H	99	61.740	Mandrillus_leucophaeus
ENSCSAVG00000000030	-	99	59.081	ENSMAMG00000019715	supt5h	87	81.250	Mastacembelus_armatus
ENSCSAVG00000000030	-	99	59.057	ENSMZEG00005024864	supt5h	99	59.733	Maylandia_zebra
ENSCSAVG00000000030	-	99	59.807	ENSMGAG00000012449	SUPT5H	99	61.552	Meleagris_gallopavo
ENSCSAVG00000000030	-	99	59.448	ENSMAUG00000009006	Supt5	99	58.690	Mesocricetus_auratus
ENSCSAVG00000000030	-	99	59.425	ENSMICG00000006115	SUPT5H	99	61.608	Microcebus_murinus
ENSCSAVG00000000030	-	99	59.300	ENSMOCG00000012211	Supt5	99	60.705	Microtus_ochrogaster
ENSCSAVG00000000030	-	99	59.358	ENSMMOG00000009770	supt5h	99	60.038	Mola_mola
ENSCSAVG00000000030	-	96	56.238	ENSMODG00000013570	SUPT5H	99	57.839	Monodelphis_domestica
ENSCSAVG00000000030	-	99	59.358	ENSMALG00000017833	supt5h	99	59.964	Monopterus_albus
ENSCSAVG00000000030	-	99	58.868	MGP_CAROLIEiJ_G0029441	Supt5	99	60.614	Mus_caroli
ENSCSAVG00000000030	-	99	58.868	ENSMUSG00000003435	Supt5	99	60.885	Mus_musculus
ENSCSAVG00000000030	-	99	59.188	MGP_PahariEiJ_G0012677	Supt5	99	61.031	Mus_pahari
ENSCSAVG00000000030	-	99	58.868	MGP_SPRETEiJ_G0030539	Supt5	99	60.705	Mus_spretus
ENSCSAVG00000000030	-	99	59.212	ENSMPUG00000017721	SUPT5H	99	61.302	Mustela_putorius_furo
ENSCSAVG00000000030	-	95	65.306	ENSMLUG00000008079	-	93	65.306	Myotis_lucifugus
ENSCSAVG00000000030	-	99	58.892	ENSMLUG00000013886	-	99	61.121	Myotis_lucifugus
ENSCSAVG00000000030	-	99	59.081	ENSNGAG00000022458	Supt5	99	60.995	Nannospalax_galili
ENSCSAVG00000000030	-	83	57.199	ENSNBRG00000005030	supt5h	73	58.581	Neolamprologus_brichardi
ENSCSAVG00000000030	-	99	57.614	ENSNLEG00000014365	SUPT5H	99	60.316	Nomascus_leucogenys
ENSCSAVG00000000030	-	99	55.829	ENSMEUG00000016423	SUPT5H	99	59.726	Notamacropus_eugenii
ENSCSAVG00000000030	-	96	56.811	ENSOPRG00000016844	SUPT5H	99	57.423	Ochotona_princeps
ENSCSAVG00000000030	-	99	58.573	ENSODEG00000016445	SUPT5H	99	60.905	Octodon_degus
ENSCSAVG00000000030	-	99	59.037	ENSONIG00000001100	supt5h	99	59.840	Oreochromis_niloticus
ENSCSAVG00000000030	-	79	65.537	ENSOANG00000008175	SUPT5H	99	63.075	Ornithorhynchus_anatinus
ENSCSAVG00000000030	-	99	58.761	ENSOCUG00000002155	SUPT5H	99	60.579	Oryctolagus_cuniculus
ENSCSAVG00000000030	-	99	58.930	ENSORLG00000000394	supt5h	99	59.103	Oryzias_latipes
ENSCSAVG00000000030	-	99	59.037	ENSORLG00020021680	supt5h	99	59.193	Oryzias_latipes_hni
ENSCSAVG00000000030	-	99	59.037	ENSORLG00015010686	supt5h	99	59.193	Oryzias_latipes_hsok
ENSCSAVG00000000030	-	99	58.955	ENSOGAG00000033979	SUPT5H	99	61.176	Otolemur_garnettii
ENSCSAVG00000000030	-	99	59.529	ENSOARG00000006174	SUPT5H	99	61.106	Ovis_aries
ENSCSAVG00000000030	-	99	59.212	ENSPPAG00000040180	SUPT5H	99	61.392	Pan_paniscus
ENSCSAVG00000000030	-	99	59.105	ENSPPRG00000009686	SUPT5H	99	61.212	Panthera_pardus
ENSCSAVG00000000030	-	99	59.212	ENSPTIG00000011633	SUPT5H	99	61.302	Panthera_tigris_altaica
ENSCSAVG00000000030	-	99	59.212	ENSPTRG00000010971	SUPT5H	99	61.392	Pan_troglodytes
ENSCSAVG00000000030	-	99	59.721	ENSPANG00000007383	SUPT5H	99	61.302	Papio_anubis
ENSCSAVG00000000030	-	99	59.829	ENSPKIG00000006261	supt5h	99	61.046	Paramormyrops_kingsleyae
ENSCSAVG00000000030	-	99	56.887	ENSPSIG00000014117	SUPT5H	99	59.425	Pelodiscus_sinensis
ENSCSAVG00000000030	-	94	57.401	ENSPMGG00000020581	supt5h	96	59.899	Periophthalmus_magnuspinnatus
ENSCSAVG00000000030	-	99	58.720	ENSPEMG00000015730	Supt5	99	60.850	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000030	-	99	59.037	ENSPMAG00000006913	supt5h	100	60.772	Petromyzon_marinus
ENSCSAVG00000000030	-	99	59.251	ENSPCIG00000010477	SUPT5H	99	60.850	Phascolarctos_cinereus
ENSCSAVG00000000030	-	91	59.024	ENSPFOG00000011126	supt5h	100	58.454	Poecilia_formosa
ENSCSAVG00000000030	-	99	58.911	ENSPLAG00000013092	supt5h	99	59.677	Poecilia_latipinna
ENSCSAVG00000000030	-	93	57.758	ENSPMEG00000020479	supt5h	98	59.327	Poecilia_mexicana
ENSCSAVG00000000030	-	99	58.387	ENSPREG00000006712	supt5h	100	58.453	Poecilia_reticulata
ENSCSAVG00000000030	-	99	59.212	ENSPPYG00000009968	SUPT5H	99	60.636	Pongo_abelii
ENSCSAVG00000000030	-	99	51.757	ENSPCAG00000010830	SUPT5H	99	53.394	Procavia_capensis
ENSCSAVG00000000030	-	99	59.531	ENSPCOG00000021231	SUPT5H	99	61.608	Propithecus_coquereli
ENSCSAVG00000000030	-	77	66.960	ENSPVAG00000011129	SUPT5H	80	64.474	Pteropus_vampyrus
ENSCSAVG00000000030	-	99	58.576	ENSPNYG00000009203	supt5h	97	58.993	Pundamilia_nyererei
ENSCSAVG00000000030	-	99	55.974	ENSPNAG00000010925	supt5h	95	62.344	Pygocentrus_nattereri
ENSCSAVG00000000030	-	99	56.777	ENSRNOG00000032034	Supt5h	99	64.423	Rattus_norvegicus
ENSCSAVG00000000030	-	99	59.212	ENSRBIG00000039828	SUPT5H	98	60.998	Rhinopithecus_bieti
ENSCSAVG00000000030	-	99	59.212	ENSRROG00000019625	SUPT5H	99	61.302	Rhinopithecus_roxellana
ENSCSAVG00000000030	-	99	58.999	ENSSBOG00000022657	SUPT5H	99	61.317	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000030	-	99	56.323	ENSSHAG00000009504	SUPT5H	99	60.079	Sarcophilus_harrisii
ENSCSAVG00000000030	-	99	59.722	ENSSFOG00015005973	supt5h	99	61.162	Scleropages_formosus
ENSCSAVG00000000030	-	99	55.544	ENSSMAG00000004503	supt5h	98	59.583	Scophthalmus_maximus
ENSCSAVG00000000030	-	99	59.358	ENSSDUG00000014520	supt5h	99	60.522	Seriola_dumerili
ENSCSAVG00000000030	-	99	59.658	ENSSLDG00000008112	supt5h	99	60.432	Seriola_lalandi_dorsalis
ENSCSAVG00000000030	-	99	56.438	ENSSPUG00000011434	SUPT5H	96	58.911	Sphenodon_punctatus
ENSCSAVG00000000030	-	99	58.868	ENSSPAG00000010429	supt5h	99	59.484	Stegastes_partitus
ENSCSAVG00000000030	-	99	57.827	ENSSSCG00000023556	SUPT5H	99	58.927	Sus_scrofa
ENSCSAVG00000000030	-	99	58.798	ENSTRUG00000002370	supt5h	100	59.103	Takifugu_rubripes
ENSCSAVG00000000030	-	99	59.232	ENSTNIG00000011178	supt5h	99	59.729	Tetraodon_nigroviridis
ENSCSAVG00000000030	-	67	58.673	ENSTBEG00000017617	SUPT5H	99	55.540	Tupaia_belangeri
ENSCSAVG00000000030	-	99	59.212	ENSTTRG00000003573	SUPT5H	99	60.669	Tursiops_truncatus
ENSCSAVG00000000030	-	99	59.318	ENSUAMG00000020014	SUPT5H	99	61.518	Ursus_americanus
ENSCSAVG00000000030	-	99	59.318	ENSUMAG00000019558	SUPT5H	99	60.850	Ursus_maritimus
ENSCSAVG00000000030	-	99	59.212	ENSVVUG00000006193	SUPT5H	93	62.763	Vulpes_vulpes
ENSCSAVG00000000030	-	99	58.573	ENSXETG00000002888	supt5h	100	60.743	Xenopus_tropicalis
ENSCSAVG00000000030	-	99	57.799	ENSXMAG00000004169	supt5h	100	58.326	Xiphophorus_maculatus