EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000000188 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
5556 bases
Position
chrreftig_23:1051762-1057317
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000000338RRM_1PF00076.221.7e-3412
ENSCSAVP00000000338RRM_1PF00076.221.7e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000000341-1180-ENSCSAVP00000000338315 (aa)-H2Y4U0
Gene Model
Click here to download ENSCSAVG00000000188's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000188's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000000188-5333.149ENSCSAVG00000001118-5333.816
ENSCSAVG00000000188-5038.462ENSCSAVG00000004946-9338.462
ENSCSAVG00000000188-6133.929ENSCSAVG00000000472-8833.333
ENSCSAVG00000000188-7147.179ENSCSAVG00000009774-8051.381
ENSCSAVG00000000188-5342.105ENSCSAVG00000004457-9542.105
ENSCSAVG00000000188-7133.333ENSCSAVG00000010397-6236.788
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000000188-5651.412ENSG00000197451HNRNPAB6951.515Homo_sapiens
ENSCSAVG00000000188-6844.444ENSAPOG00000016726-5753.892Acanthochromis_polyacanthus
ENSCSAVG00000000188-9042.759ENSAPOG00000009207hnrnpaba5054.491Acanthochromis_polyacanthus
ENSCSAVG00000000188-5352.941ENSAMEG00000006465HNRNPAB6253.988Ailuropoda_melanoleuca
ENSCSAVG00000000188-5453.757ENSACIG00000017341hnrnpaba6649.541Amphilophus_citrinellus
ENSCSAVG00000000188-7144.681ENSACIG00000012959-6649.246Amphilophus_citrinellus
ENSCSAVG00000000188-9042.759ENSAOCG00000012562hnrnpaba5054.491Amphiprion_ocellaris
ENSCSAVG00000000188-6844.444ENSAOCG00000020596-6249.223Amphiprion_ocellaris
ENSCSAVG00000000188-7143.404ENSAPEG00000001689-5153.892Amphiprion_percula
ENSCSAVG00000000188-9042.759ENSAPEG00000017599hnrnpaba6054.491Amphiprion_percula
ENSCSAVG00000000188-9043.103ENSATEG00000006705hnrnpaba5054.491Anabas_testudineus
ENSCSAVG00000000188-5253.293ENSATEG00000022784-6848.611Anabas_testudineus
ENSCSAVG00000000188-5351.765ENSAPLG00000014040HNRNPAB6252.761Anas_platyrhynchos
ENSCSAVG00000000188-5452.047ENSACAG00000016946HNRNPAB5353.293Anolis_carolinensis
ENSCSAVG00000000188-5650.282ENSANAG00000026572-6152.096Aotus_nancymaae
ENSCSAVG00000000188-5651.977ENSANAG00000026991HNRNPAB5853.892Aotus_nancymaae
ENSCSAVG00000000188-5454.335ENSACLG00000007958hnrnpaba6550.000Astatotilapia_calliptera
ENSCSAVG00000000188-7742.339ENSACLG00000007827hnrnpaba6950.000Astatotilapia_calliptera
ENSCSAVG00000000188-7048.430ENSACLG00000024583-6455.090Astatotilapia_calliptera
ENSCSAVG00000000188-5450.276ENSAMXG00000002560hnrnpaba7244.915Astyanax_mexicanus
ENSCSAVG00000000188-6250.251ENSAMXG00000039814hnrnpabb7846.341Astyanax_mexicanus
ENSCSAVG00000000188-5651.977ENSBTAG00000013627HNRNPAB5853.892Bos_taurus
ENSCSAVG00000000188-5651.977ENSCJAG00000012235HNRNPAB5853.892Callithrix_jacchus
ENSCSAVG00000000188-5651.977ENSCAFG00020003646HNRNPAB5053.892Canis_lupus_dingo
ENSCSAVG00000000188-5651.977ENSCHIG00000021687HNRNPAB5853.892Capra_hircus
ENSCSAVG00000000188-6643.602ENSTSYG00000037019-8139.726Carlito_syrichta
ENSCSAVG00000000188-5262.376ENSCAPG00000005367HNRNPAB6561.165Cavia_aperea
ENSCSAVG00000000188-5651.977ENSCPOG00000025972HNRNPAB6946.903Cavia_porcellus
ENSCSAVG00000000188-5651.977ENSCCAG00000036244HNRNPAB5853.892Cebus_capucinus
ENSCSAVG00000000188-5651.977ENSCATG00000032328HNRNPAB5853.892Cercocebus_atys
ENSCSAVG00000000188-5352.941ENSCLAG00000011022HNRNPAB6053.988Chinchilla_lanigera
ENSCSAVG00000000188-5651.124ENSCSAG00000002626-6352.047Chlorocebus_sabaeus
ENSCSAVG00000000188-9144.482ENSCPBG00000008819HNRNPAB6153.892Chrysemys_picta_bellii
ENSCSAVG00000000188-6477.670ENSCING00000016737-7471.674Ciona_intestinalis
ENSCSAVG00000000188-6049.635ENSCANG00000033320HNRNPAB8746.250Colobus_angolensis_palliatus
ENSCSAVG00000000188-5649.718ENSCGRG00001005044Hnrnpab6845.614Cricetulus_griseus_chok1gshd
ENSCSAVG00000000188-5350.588ENSCGRG00000018216Hnrnpab6451.534Cricetulus_griseus_crigri
ENSCSAVG00000000188-7143.913ENSCSEG00000010345-7839.773Cynoglossus_semilaevis
ENSCSAVG00000000188-5453.179ENSCSEG00000011636hnrnpaba6153.892Cynoglossus_semilaevis
ENSCSAVG00000000188-7146.186ENSCVAG00000019772hnrnpaba7148.261Cyprinodon_variegatus
ENSCSAVG00000000188-7043.534ENSCVAG00000002489-7646.862Cyprinodon_variegatus
ENSCSAVG00000000188-5650.847ENSDARG00000099865hnrnpabb8043.320Danio_rerio
ENSCSAVG00000000188-5261.856ENSDARG00000007960hnrnpaba6957.143Danio_rerio
ENSCSAVG00000000188-7040.254ENSDNOG00000036054-5047.468Dasypus_novemcinctus
ENSCSAVG00000000188-5651.412ENSDNOG00000013820-5053.293Dasypus_novemcinctus
ENSCSAVG00000000188-7238.424ENSDNOG00000032858-6345.588Dasypus_novemcinctus
ENSCSAVG00000000188-6547.727ENSDORG00000011015Hnrnpab6846.491Dipodomys_ordii
ENSCSAVG00000000188-5436.257ENSETEG00000001755-6236.257Echinops_telfairi
ENSCSAVG00000000188-5845.213ENSEBUG00000007449HNRNPAB5248.634Eptatretus_burgeri
ENSCSAVG00000000188-5651.977ENSEASG00005012572-5853.892Equus_asinus_asinus
ENSCSAVG00000000188-5040.625ENSECAG00000037355-5640.625Equus_caballus
ENSCSAVG00000000188-7044.398ENSECAG00000018242-5253.892Equus_caballus
ENSCSAVG00000000188-6041.722ENSEEUG00000013226HNRNPAB5942.361Erinaceus_europaeus
ENSCSAVG00000000188-5252.695ENSELUG00000015443hnrnpaba5648.205Esox_lucius
ENSCSAVG00000000188-5252.695ENSELUG00000020765hnrnpabb5852.695Esox_lucius
ENSCSAVG00000000188-5652.542ENSFCAG00000027603HNRNPAB5854.491Felis_catus
ENSCSAVG00000000188-5951.479ENSFALG00000007654HNRNPAB6152.469Ficedula_albicollis
ENSCSAVG00000000188-5352.941ENSFDAG00000016490HNRNPAB6653.988Fukomys_damarensis
ENSCSAVG00000000188-5253.892ENSFHEG00000005659-5851.366Fundulus_heteroclitus
ENSCSAVG00000000188-6946.330ENSFHEG00000013108hnrnpaba7047.826Fundulus_heteroclitus
ENSCSAVG00000000188-5253.614ENSGMOG00000009355-6444.872Gadus_morhua
ENSCSAVG00000000188-5453.757ENSGAFG00000008331hnrnpaba7148.696Gambusia_affinis
ENSCSAVG00000000188-9043.007ENSGACG00000020830-7444.715Gasterosteus_aculeatus
ENSCSAVG00000000188-5553.143ENSGACG00000018116hnrnpaba5054.491Gasterosteus_aculeatus
ENSCSAVG00000000188-9143.813ENSGAGG00000007175HNRNPAB6153.892Gopherus_agassizii
ENSCSAVG00000000188-5747.778ENSGGOG00000028444-6848.795Gorilla_gorilla
ENSCSAVG00000000188-5651.412ENSGGOG00000011692HNRNPAB5853.293Gorilla_gorilla
ENSCSAVG00000000188-5454.335ENSHBUG00000002484hnrnpaba6550.000Haplochromis_burtoni
ENSCSAVG00000000188-7048.430ENSHBUG00000014556-5653.073Haplochromis_burtoni
ENSCSAVG00000000188-5651.977ENSHGLG00000014490HNRNPAB6950.505Heterocephalus_glaber_female
ENSCSAVG00000000188-5752.198ENSHGLG00100007384HNRNPAB6753.143Heterocephalus_glaber_male
ENSCSAVG00000000188-6647.143ENSHCOG00000015341hnrnpaba6252.695Hippocampus_comes
ENSCSAVG00000000188-5450.292ENSHCOG00000009363-5550.279Hippocampus_comes
ENSCSAVG00000000188-5651.955ENSIPUG00000020220hnrnpab7543.320Ictalurus_punctatus
ENSCSAVG00000000188-5448.603ENSIPUG00000018218HNRNPAB5548.663Ictalurus_punctatus
ENSCSAVG00000000188-5651.977ENSSTOG00000024394HNRNPAB6950.505Ictidomys_tridecemlineatus
ENSCSAVG00000000188-5351.176ENSJJAG00000022240Hnrnpab8145.740Jaculus_jaculus
ENSCSAVG00000000188-5454.335ENSKMAG00000005188hnrnpaba7148.485Kryptolebias_marmoratus
ENSCSAVG00000000188-5254.491ENSKMAG00000003831-6255.975Kryptolebias_marmoratus
ENSCSAVG00000000188-6843.421ENSLBEG00000004479-5450.279Labrus_bergylta
ENSCSAVG00000000188-7145.957ENSLACG00000015227HNRNPAB6848.837Latimeria_chalumnae
ENSCSAVG00000000188-5450.838ENSLOCG00000009773hnrnpabb6547.234Lepisosteus_oculatus
ENSCSAVG00000000188-5452.023ENSLAFG00000001189HNRNPAB5152.695Loxodonta_africana
ENSCSAVG00000000188-5651.977ENSMFAG00000035188HNRNPAB5853.892Macaca_fascicularis
ENSCSAVG00000000188-5651.977ENSMMUG00000003996HNRNPAB6952.020Macaca_mulatta
ENSCSAVG00000000188-5651.977ENSMNEG00000044677HNRNPAB5853.892Macaca_nemestrina
ENSCSAVG00000000188-6049.635ENSMLEG00000039381-8746.250Mandrillus_leucophaeus
ENSCSAVG00000000188-7444.398ENSMAMG00000020142-6751.397Mastacembelus_armatus
ENSCSAVG00000000188-9043.103ENSMAMG00000008021hnrnpaba5054.491Mastacembelus_armatus
ENSCSAVG00000000188-5454.335ENSMZEG00005012480hnrnpaba6550.000Maylandia_zebra
ENSCSAVG00000000188-7048.430ENSMZEG00005011821-6455.090Maylandia_zebra
ENSCSAVG00000000188-5550.568ENSMGAG00000007727HNRNPAB7652.761Meleagris_gallopavo
ENSCSAVG00000000188-5651.977ENSMICG00000027030HNRNPAB5853.892Microcebus_murinus
ENSCSAVG00000000188-5650.282ENSMOCG00000014470Hnrnpab6845.575Microtus_ochrogaster
ENSCSAVG00000000188-6244.976ENSMMOG00000016852-7844.976Mola_mola
ENSCSAVG00000000188-5668.367ENSMMOG00000004165HNRNPAB7168.367Mola_mola
ENSCSAVG00000000188-5453.757ENSMALG00000015091hnrnpaba6650.000Monopterus_albus
ENSCSAVG00000000188-5252.695ENSMALG00000010467-7347.980Monopterus_albus
ENSCSAVG00000000188-7742.520MGP_CAROLIEiJ_G0016311Hnrnpab7245.575Mus_caroli
ENSCSAVG00000000188-7742.520ENSMUSG00000020358Hnrnpab7245.575Mus_musculus
ENSCSAVG00000000188-7742.520MGP_PahariEiJ_G0017446Hnrnpab7245.575Mus_pahari
ENSCSAVG00000000188-7742.520MGP_SPRETEiJ_G0017155Hnrnpab7245.575Mus_spretus
ENSCSAVG00000000188-5651.977ENSMPUG00000000743HNRNPAB5850.000Mustela_putorius_furo
ENSCSAVG00000000188-5452.023ENSMLUG00000003380HNRNPAB5052.695Myotis_lucifugus
ENSCSAVG00000000188-5650.847ENSNGAG00000021642Hnrnpab7046.018Nannospalax_galili
ENSCSAVG00000000188-6845.333ENSNBRG00000014795-5753.073Neolamprologus_brichardi
ENSCSAVG00000000188-5453.757ENSNBRG00000011408hnrnpaba6549.541Neolamprologus_brichardi
ENSCSAVG00000000188-6049.635ENSNLEG00000015775-8746.250Nomascus_leucogenys
ENSCSAVG00000000188-5445.038ENSNLEG00000034681-7745.082Nomascus_leucogenys
ENSCSAVG00000000188-5352.941ENSOPRG00000002546HNRNPAB6253.988Ochotona_princeps
ENSCSAVG00000000188-5651.977ENSODEG00000006830HNRNPAB6952.020Octodon_degus
ENSCSAVG00000000188-7044.397ENSONIG00000013237-5752.514Oreochromis_niloticus
ENSCSAVG00000000188-5453.757ENSONIG00000012982hnrnpaba6549.541Oreochromis_niloticus
ENSCSAVG00000000188-6645.259ENSOANG00000004998HNRNPAB6052.147Ornithorhynchus_anatinus
ENSCSAVG00000000188-5651.955ENSOCUG00000026424HNRNPAB6352.601Oryctolagus_cuniculus
ENSCSAVG00000000188-5453.179ENSORLG00000026044hnrnpabb6348.744Oryzias_latipes
ENSCSAVG00000000188-7246.154ENSORLG00000005327hnrnpaba5053.892Oryzias_latipes
ENSCSAVG00000000188-7246.154ENSORLG00020012133hnrnpaba5053.892Oryzias_latipes_hni
ENSCSAVG00000000188-5453.179ENSORLG00020007776hnrnpabb6348.744Oryzias_latipes_hni
ENSCSAVG00000000188-7246.154ENSORLG00015022877hnrnpaba5053.892Oryzias_latipes_hsok
ENSCSAVG00000000188-5453.179ENSORLG00015014131hnrnpabb6348.744Oryzias_latipes_hsok
ENSCSAVG00000000188-7246.154ENSOMEG00000005936hnrnpaba6047.500Oryzias_melastigma
ENSCSAVG00000000188-5253.892ENSOMEG00000023772hnrnpabb6348.744Oryzias_melastigma
ENSCSAVG00000000188-5651.977ENSOGAG00000030251HNRNPAB5053.892Otolemur_garnettii
ENSCSAVG00000000188-5651.977ENSOARG00000006311HNRNPAB5053.892Ovis_aries
ENSCSAVG00000000188-6048.905ENSPPAG00000037536-8745.625Pan_paniscus
ENSCSAVG00000000188-5846.524ENSPPAG00000041555-6748.193Pan_paniscus
ENSCSAVG00000000188-5353.529ENSPPRG00000020542HNRNPAB7147.321Panthera_pardus
ENSCSAVG00000000188-6050.365ENSPTIG00000021727HNRNPAB7151.538Panthera_tigris_altaica
ENSCSAVG00000000188-5747.778ENSPTRG00000048246-6648.795Pan_troglodytes
ENSCSAVG00000000188-5651.412ENSPTRG00000017601HNRNPAB5853.293Pan_troglodytes
ENSCSAVG00000000188-5651.977ENSPANG00000014427HNRNPAB5853.892Papio_anubis
ENSCSAVG00000000188-5450.829ENSPKIG00000008659hnrnpaba6945.106Paramormyrops_kingsleyae
ENSCSAVG00000000188-5452.023ENSPKIG00000018904-6746.847Paramormyrops_kingsleyae
ENSCSAVG00000000188-5753.704ENSPSIG00000010617HNRNPAB7753.704Pelodiscus_sinensis
ENSCSAVG00000000188-5451.445ENSPMGG00000001821-7443.162Periophthalmus_magnuspinnatus
ENSCSAVG00000000188-5945.263ENSPMGG00000004062HNRNPAB8943.204Periophthalmus_magnuspinnatus
ENSCSAVG00000000188-5351.176ENSPEMG00000023987Hnrnpab7545.291Peromyscus_maniculatus_bairdii
ENSCSAVG00000000188-5253.892ENSPFOG00000012650-6448.744Poecilia_formosa
ENSCSAVG00000000188-5453.757ENSPFOG00000008278hnrnpaba7148.261Poecilia_formosa
ENSCSAVG00000000188-5453.757ENSPLAG00000009450hnrnpaba7148.261Poecilia_latipinna
ENSCSAVG00000000188-5253.892ENSPLAG00000019814-6448.744Poecilia_latipinna
ENSCSAVG00000000188-5253.892ENSPMEG00000023285-7548.744Poecilia_mexicana
ENSCSAVG00000000188-5453.757ENSPMEG00000019974hnrnpaba7148.261Poecilia_mexicana
ENSCSAVG00000000188-5453.757ENSPREG00000004086hnrnpaba7148.261Poecilia_reticulata
ENSCSAVG00000000188-5253.892ENSPREG00000013528-7548.744Poecilia_reticulata
ENSCSAVG00000000188-6052.071ENSPPYG00000016107-6253.086Pongo_abelii
ENSCSAVG00000000188-5351.176ENSPCAG00000006760HNRNPAB6252.147Procavia_capensis
ENSCSAVG00000000188-5651.412ENSPCOG00000015793-5953.293Propithecus_coquereli
ENSCSAVG00000000188-7048.430ENSPNYG00000013003-5653.073Pundamilia_nyererei
ENSCSAVG00000000188-5454.335ENSPNYG00000000303hnrnpaba6550.000Pundamilia_nyererei
ENSCSAVG00000000188-5253.892ENSPNAG00000028963hnrnpabb7546.288Pygocentrus_nattereri
ENSCSAVG00000000188-6148.223ENSPNAG00000000458hnrnpaba7047.465Pygocentrus_nattereri
ENSCSAVG00000000188-5650.282ENSRNOG00000046272Hnrnpab6845.575Rattus_norvegicus
ENSCSAVG00000000188-5650.282ENSRNOG00000003645LOC1036899316845.575Rattus_norvegicus
ENSCSAVG00000000188-5651.977ENSRBIG00000029449HNRNPAB5853.892Rhinopithecus_bieti
ENSCSAVG00000000188-5651.977ENSRROG00000035729HNRNPAB5853.892Rhinopithecus_roxellana
ENSCSAVG00000000188-6049.635ENSSBOG00000022526HNRNPAB8846.296Saimiri_boliviensis_boliviensis
ENSCSAVG00000000188-6150.510ENSSFOG00015015634hnrnpaba8046.281Scleropages_formosus
ENSCSAVG00000000188-6050.000ENSSFOG00015022519hnrnpabb6647.391Scleropages_formosus
ENSCSAVG00000000188-8942.014ENSSMAG00000003760hnrnpaba8348.598Scophthalmus_maximus
ENSCSAVG00000000188-9043.103ENSSDUG00000004787hnrnpaba5054.491Seriola_dumerili
ENSCSAVG00000000188-9043.103ENSSLDG00000005199hnrnpaba6548.990Seriola_lalandi_dorsalis
ENSCSAVG00000000188-5452.632ENSSPUG00000016806HNRNPAB5953.892Sphenodon_punctatus
ENSCSAVG00000000188-5453.757ENSSPAG00000013787hnrnpaba5054.491Stegastes_partitus
ENSCSAVG00000000188-7045.064ENSSPAG00000005377-7247.598Stegastes_partitus
ENSCSAVG00000000188-5651.977ENSSSCG00000014031-5653.892Sus_scrofa
ENSCSAVG00000000188-6042.487ENSSSCG00000001932-7542.708Sus_scrofa
ENSCSAVG00000000188-5351.765ENSTGUG00000001168HNRNPAB6352.761Taeniopygia_guttata
ENSCSAVG00000000188-9342.475ENSTRUG00000008411-7247.297Takifugu_rubripes
ENSCSAVG00000000188-5553.714ENSTRUG00000025954hnrnpaba7246.957Takifugu_rubripes
ENSCSAVG00000000188-5750.270ENSTNIG00000007596-7246.667Tetraodon_nigroviridis
ENSCSAVG00000000188-5751.832ENSTNIG00000010512hnrnpaba6454.878Tetraodon_nigroviridis
ENSCSAVG00000000188-7138.017ENSTTRG00000010604HNRNPAB5042.197Tursiops_truncatus
ENSCSAVG00000000188-5055.063ENSUAMG00000003337HNRNPAB6450.000Ursus_americanus
ENSCSAVG00000000188-6049.635ENSUMAG00000023918HNRNPAB7050.769Ursus_maritimus
ENSCSAVG00000000188-5855.882ENSVVUG00000002657-8955.882Vulpes_vulpes
ENSCSAVG00000000188-5651.977ENSVVUG00000001047-6054.217Vulpes_vulpes
ENSCSAVG00000000188-7544.355ENSXETG00000003836hnrnpab6350.000Xenopus_tropicalis
ENSCSAVG00000000188-5453.757ENSXCOG00000003397hnrnpaba8246.215Xiphophorus_couchianus
ENSCSAVG00000000188-5253.892ENSXCOG00000018775-7548.744Xiphophorus_couchianus
ENSCSAVG00000000188-5253.892ENSXMAG00000015407-7548.744Xiphophorus_maculatus
ENSCSAVG00000000188-5453.757ENSXMAG00000008957hnrnpaba7148.261Xiphophorus_maculatus

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