EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000000201 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4624 bases
Position: chrreftig_486:16257-20880
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000359	2OG-FeII_Oxy	PF03171.20	1.8e-18	1	1
ENSCSAVP00000000360	2OG-FeII_Oxy	PF03171.20	7.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000365	-	1305	-	ENSCSAVP00000000360	324 (aa)	-	H2Y4W2
ENSCSAVT00000000364	-	850	-	ENSCSAVP00000000359	154 (aa)	-	H2Y4W1

Gene Model

Click here to download ENSCSAVG00000000201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000201's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000000201	-	94	45.890	ENSCSAVG00000001775	-	96	45.732
ENSCSAVG00000000201	-	94	47.297	ENSCSAVG00000004616	-	98	42.006
ENSCSAVG00000000201	-	75	81.818	ENSCSAVG00000001337	-	100	81.818
ENSCSAVG00000000201	-	92	42.958	ENSCSAVG00000004871	-	91	41.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000201	-	95	33.113	ENSAPOG00000011678	si:dkey-10o6.2	80	34.298	Acanthochromis_polyacanthus
ENSCSAVG00000000201	-	87	34.602	ENSACIG00000024115	si:dkey-10o6.2	89	34.602	Amphilophus_citrinellus
ENSCSAVG00000000201	-	87	32.877	ENSACIG00000011675	-	90	32.877	Amphilophus_citrinellus
ENSCSAVG00000000201	-	97	33.231	ENSAOCG00000013068	si:dkey-10o6.2	98	33.231	Amphiprion_ocellaris
ENSCSAVG00000000201	-	97	32.923	ENSAPEG00000011246	si:dkey-10o6.2	99	32.923	Amphiprion_percula
ENSCSAVG00000000201	-	97	32.609	ENSATEG00000000030	si:dkey-10o6.2	98	32.609	Anabas_testudineus
ENSCSAVG00000000201	-	87	33.904	ENSATEG00000021945	si:dkey-10o6.2	90	33.904	Anabas_testudineus
ENSCSAVG00000000201	-	87	33.910	ENSATEG00000021952	si:dkey-10o6.2	90	33.910	Anabas_testudineus
ENSCSAVG00000000201	-	87	34.589	ENSACLG00000023011	si:dkey-10o6.2	90	34.589	Astatotilapia_calliptera
ENSCSAVG00000000201	-	87	36.713	ENSAMXG00000021555	si:dkey-10o6.2	90	36.713	Astyanax_mexicanus
ENSCSAVG00000000201	-	98	58.044	ENSCING00000012500	-	98	58.044	Ciona_intestinalis
ENSCSAVG00000000201	-	95	44.595	ENSCING00000016920	-	94	41.379	Ciona_intestinalis
ENSCSAVG00000000201	-	72	43.404	ENSCING00000011926	-	99	43.404	Ciona_intestinalis
ENSCSAVG00000000201	-	88	40.138	ENSCING00000007255	-	87	40.138	Ciona_intestinalis
ENSCSAVG00000000201	-	98	52.848	ENSCING00000022311	-	98	52.848	Ciona_intestinalis
ENSCSAVG00000000201	-	87	32.639	ENSCSEG00000000927	si:dkey-10o6.2	90	32.639	Cynoglossus_semilaevis
ENSCSAVG00000000201	-	87	31.010	ENSCSEG00000000918	si:dkey-10o6.2	89	31.010	Cynoglossus_semilaevis
ENSCSAVG00000000201	-	94	32.215	ENSCVAG00000015074	si:dkey-10o6.2	90	35.274	Cyprinodon_variegatus
ENSCSAVG00000000201	-	87	33.103	ENSDARG00000074628	si:dkey-10o6.2	80	33.103	Danio_rerio
ENSCSAVG00000000201	-	92	38.514	FBgn0053099	CG33099	91	32.915	Drosophila_melanogaster
ENSCSAVG00000000201	-	87	32.302	ENSELUG00000003488	si:dkey-10o6.2	91	32.302	Esox_lucius
ENSCSAVG00000000201	-	87	34.708	ENSFHEG00000019035	si:dkey-10o6.2	90	34.708	Fundulus_heteroclitus
ENSCSAVG00000000201	-	87	34.138	ENSGMOG00000018989	si:dkey-10o6.2	93	34.138	Gadus_morhua
ENSCSAVG00000000201	-	87	34.589	ENSGAFG00000006137	si:dkey-10o6.2	91	34.589	Gambusia_affinis
ENSCSAVG00000000201	-	96	35.526	ENSGACG00000006806	si:dkey-10o6.2	99	31.343	Gasterosteus_aculeatus
ENSCSAVG00000000201	-	87	34.247	ENSHBUG00000008853	si:dkey-10o6.2	90	34.247	Haplochromis_burtoni
ENSCSAVG00000000201	-	87	34.256	ENSHCOG00000017626	si:dkey-10o6.2	90	34.256	Hippocampus_comes
ENSCSAVG00000000201	-	87	34.948	ENSHCOG00000017671	-	90	34.948	Hippocampus_comes
ENSCSAVG00000000201	-	87	32.526	ENSIPUG00000018911	-	90	32.526	Ictalurus_punctatus
ENSCSAVG00000000201	-	87	32.180	ENSIPUG00000018879	si:dkey-10o6.2	83	31.597	Ictalurus_punctatus
ENSCSAVG00000000201	-	99	31.077	ENSKMAG00000006197	si:dkey-10o6.2	99	31.077	Kryptolebias_marmoratus
ENSCSAVG00000000201	-	98	31.988	ENSLBEG00000003839	si:dkey-10o6.2	99	31.988	Labrus_bergylta
ENSCSAVG00000000201	-	87	33.449	ENSLBEG00000003823	si:dkey-10o6.2	82	33.449	Labrus_bergylta
ENSCSAVG00000000201	-	97	32.615	ENSMAMG00000023022	si:dkey-10o6.2	98	32.615	Mastacembelus_armatus
ENSCSAVG00000000201	-	97	31.889	ENSMAMG00000023020	si:dkey-10o6.2	98	31.889	Mastacembelus_armatus
ENSCSAVG00000000201	-	87	33.910	ENSMAMG00000023026	-	90	33.910	Mastacembelus_armatus
ENSCSAVG00000000201	-	87	33.103	ENSMAMG00000023025	-	90	33.103	Mastacembelus_armatus
ENSCSAVG00000000201	-	87	34.589	ENSMZEG00005012018	si:dkey-10o6.2	90	34.589	Maylandia_zebra
ENSCSAVG00000000201	-	94	34.694	ENSMMOG00000020383	si:dkey-10o6.2	89	33.225	Mola_mola
ENSCSAVG00000000201	-	87	33.447	ENSMALG00000011300	si:dkey-10o6.2	90	33.447	Monopterus_albus
ENSCSAVG00000000201	-	87	33.218	ENSNBRG00000015840	si:dkey-10o6.2	90	33.218	Neolamprologus_brichardi
ENSCSAVG00000000201	-	98	32.817	ENSONIG00000015572	si:dkey-10o6.2	97	32.817	Oreochromis_niloticus
ENSCSAVG00000000201	-	96	33.544	ENSORLG00000001314	si:dkey-10o6.2	97	33.544	Oryzias_latipes
ENSCSAVG00000000201	-	96	33.544	ENSORLG00020002660	si:dkey-10o6.2	97	33.544	Oryzias_latipes_hni
ENSCSAVG00000000201	-	92	33.803	ENSORLG00015016590	-	71	32.680	Oryzias_latipes_hsok
ENSCSAVG00000000201	-	97	33.645	ENSOMEG00000003617	si:dkey-10o6.2	96	33.645	Oryzias_melastigma
ENSCSAVG00000000201	-	87	36.491	ENSPKIG00000004206	si:dkey-10o6.2	73	36.491	Paramormyrops_kingsleyae
ENSCSAVG00000000201	-	87	37.895	ENSPKIG00000024109	-	89	37.895	Paramormyrops_kingsleyae
ENSCSAVG00000000201	-	87	34.965	ENSPKIG00000004183	si:dkey-10o6.2	79	34.965	Paramormyrops_kingsleyae
ENSCSAVG00000000201	-	87	34.483	ENSPFOG00000017244	si:dkey-10o6.2	89	33.793	Poecilia_formosa
ENSCSAVG00000000201	-	87	33.793	ENSPLAG00000008037	si:dkey-10o6.2	91	33.793	Poecilia_latipinna
ENSCSAVG00000000201	-	73	40.351	ENSPMEG00000020748	si:dkey-10o6.2	85	36.181	Poecilia_mexicana
ENSCSAVG00000000201	-	98	32.121	ENSPREG00000005108	si:dkey-10o6.2	99	32.121	Poecilia_reticulata
ENSCSAVG00000000201	-	87	33.904	ENSPNYG00000010698	si:dkey-10o6.2	90	33.904	Pundamilia_nyererei
ENSCSAVG00000000201	-	87	33.793	ENSPNAG00000014123	si:dkey-10o6.2	89	33.793	Pygocentrus_nattereri
ENSCSAVG00000000201	-	73	39.655	ENSPNAG00000014485	-	78	30.943	Pygocentrus_nattereri
ENSCSAVG00000000201	-	87	34.386	ENSSFOG00015015345	si:dkey-10o6.2	91	34.386	Scleropages_formosus
ENSCSAVG00000000201	-	87	34.028	ENSSMAG00000019016	si:dkey-10o6.2	90	34.028	Scophthalmus_maximus
ENSCSAVG00000000201	-	92	33.566	ENSSDUG00000000943	si:dkey-10o6.2	90	35.640	Seriola_dumerili
ENSCSAVG00000000201	-	92	33.566	ENSSLDG00000003462	si:dkey-10o6.2	90	35.986	Seriola_lalandi_dorsalis
ENSCSAVG00000000201	-	94	33.333	ENSSPAG00000020962	si:dkey-10o6.2	90	36.678	Stegastes_partitus
ENSCSAVG00000000201	-	87	33.673	ENSTRUG00000019532	si:dkey-10o6.2	90	33.673	Takifugu_rubripes
ENSCSAVG00000000201	-	87	34.237	ENSXCOG00000000855	si:dkey-10o6.2	91	34.237	Xiphophorus_couchianus
ENSCSAVG00000000201	-	87	34.915	ENSXMAG00000012432	si:dkey-10o6.2	91	34.915	Xiphophorus_maculatus