EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000269 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2770 bases
Position: chrreftig_97:77601-80370
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000467	Nop16	PF09420.10	8.7e-21	1	2
ENSCSAVP00000000467	Nop16	PF09420.10	8.7e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000472	-	689	-	ENSCSAVP00000000467	178 (aa)	-	H2Y569

Gene Model

Click here to download ENSCSAVG00000000269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000269's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000269	-	93	37.572	ENSAPOG00000010682	-	74	38.971	Acanthochromis_polyacanthus
ENSCSAVG00000000269	-	93	41.176	ENSAMEG00000006988	-	95	41.176	Ailuropoda_melanoleuca
ENSCSAVG00000000269	-	93	39.881	ENSACIG00000019263	nop16	95	40.476	Amphilophus_citrinellus
ENSCSAVG00000000269	-	93	38.150	ENSAOCG00000005504	nop16	74	39.706	Amphiprion_ocellaris
ENSCSAVG00000000269	-	93	38.150	ENSAPEG00000006605	nop16	74	39.706	Amphiprion_percula
ENSCSAVG00000000269	-	73	42.647	ENSATEG00000014089	nop16	95	41.618	Anabas_testudineus
ENSCSAVG00000000269	-	98	40.223	ENSACAG00000006333	-	100	40.223	Anolis_carolinensis
ENSCSAVG00000000269	-	94	38.372	ENSANAG00000027410	-	96	38.372	Aotus_nancymaae
ENSCSAVG00000000269	-	93	40.588	ENSANAG00000015743	-	95	40.588	Aotus_nancymaae
ENSCSAVG00000000269	-	93	41.420	ENSACLG00000025227	nop16	95	42.604	Astatotilapia_calliptera
ENSCSAVG00000000269	-	75	41.606	ENSAMXG00000006843	nop16	77	41.176	Astyanax_mexicanus
ENSCSAVG00000000269	-	93	41.176	ENSBTAG00000010734	NOP16	95	41.176	Bos_taurus
ENSCSAVG00000000269	-	72	32.895	WBGene00013958	ZK265.6	75	33.803	Caenorhabditis_elegans
ENSCSAVG00000000269	-	87	43.671	ENSCAFG00000016694	NOP16	88	43.671	Canis_familiaris
ENSCSAVG00000000269	-	87	43.671	ENSCAFG00020011505	-	84	43.671	Canis_lupus_dingo
ENSCSAVG00000000269	-	93	41.176	ENSCHIG00000022082	-	95	41.176	Capra_hircus
ENSCSAVG00000000269	-	93	41.176	ENSTSYG00000030409	-	95	41.176	Carlito_syrichta
ENSCSAVG00000000269	-	93	37.059	ENSTSYG00000032690	-	95	37.059	Carlito_syrichta
ENSCSAVG00000000269	-	93	42.353	ENSCPOG00000026072	-	95	42.353	Cavia_porcellus
ENSCSAVG00000000269	-	87	41.772	ENSCCAG00000026775	-	91	41.772	Cebus_capucinus
ENSCSAVG00000000269	-	93	42.353	ENSCLAG00000015405	-	95	42.353	Chinchilla_lanigera
ENSCSAVG00000000269	-	93	43.529	ENSCSAG00000009400	-	95	43.529	Chlorocebus_sabaeus
ENSCSAVG00000000269	-	87	41.250	ENSCPBG00000022647	-	88	41.615	Chrysemys_picta_bellii
ENSCSAVG00000000269	-	100	69.022	ENSCING00000006179	-	100	69.022	Ciona_intestinalis
ENSCSAVG00000000269	-	93	41.765	ENSCGRG00001004259	Nop16	95	41.765	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000269	-	93	41.765	ENSCGRG00000010975	Nop16	95	41.765	Cricetulus_griseus_crigri
ENSCSAVG00000000269	-	73	39.394	ENSCSEG00000020523	nop16	77	38.971	Cynoglossus_semilaevis
ENSCSAVG00000000269	-	93	39.766	ENSCVAG00000020140	nop16	95	39.766	Cyprinodon_variegatus
ENSCSAVG00000000269	-	95	40.698	ENSDARG00000044402	nop16	98	42.442	Danio_rerio
ENSCSAVG00000000269	-	93	41.420	ENSDNOG00000042890	-	95	41.420	Dasypus_novemcinctus
ENSCSAVG00000000269	-	87	43.038	ENSDORG00000008872	Nop16	88	43.038	Dipodomys_ordii
ENSCSAVG00000000269	-	84	35.000	ENSEBUG00000011196	nop16	69	34.375	Eptatretus_burgeri
ENSCSAVG00000000269	-	93	41.765	ENSEASG00005011988	-	95	41.765	Equus_asinus_asinus
ENSCSAVG00000000269	-	93	41.765	ENSECAG00000021354	NOP16	95	41.765	Equus_caballus
ENSCSAVG00000000269	-	93	38.235	ENSELUG00000000401	nop16	95	38.235	Esox_lucius
ENSCSAVG00000000269	-	93	42.353	ENSFCAG00000025473	-	95	42.353	Felis_catus
ENSCSAVG00000000269	-	86	40.506	ENSFALG00000008553	-	88	40.506	Ficedula_albicollis
ENSCSAVG00000000269	-	93	42.353	ENSFDAG00000000193	-	95	42.353	Fukomys_damarensis
ENSCSAVG00000000269	-	93	38.235	ENSFHEG00000016452	nop16	95	38.235	Fundulus_heteroclitus
ENSCSAVG00000000269	-	86	42.138	ENSGALG00000003355	-	88	42.138	Gallus_gallus
ENSCSAVG00000000269	-	90	37.037	ENSGAFG00000011616	nop16	73	39.855	Gambusia_affinis
ENSCSAVG00000000269	-	84	37.086	ENSGACG00000002618	-	98	38.095	Gasterosteus_aculeatus
ENSCSAVG00000000269	-	78	38.849	ENSGACG00000020819	-	92	39.744	Gasterosteus_aculeatus
ENSCSAVG00000000269	-	78	37.143	ENSGACG00000020810	nop16	94	38.217	Gasterosteus_aculeatus
ENSCSAVG00000000269	-	84	34.641	ENSGACG00000003122	-	98	35.882	Gasterosteus_aculeatus
ENSCSAVG00000000269	-	93	40.828	ENSHBUG00000013527	nop16	95	42.012	Haplochromis_burtoni
ENSCSAVG00000000269	-	93	42.941	ENSHGLG00000013437	NOP16	95	42.941	Heterocephalus_glaber_female
ENSCSAVG00000000269	-	93	42.941	ENSHGLG00100011375	NOP16	95	42.941	Heterocephalus_glaber_male
ENSCSAVG00000000269	-	87	38.608	ENSHCOG00000019999	nop16	89	38.608	Hippocampus_comes
ENSCSAVG00000000269	-	84	39.073	ENSIPUG00000006682	nop16	86	39.073	Ictalurus_punctatus
ENSCSAVG00000000269	-	93	41.279	ENSSTOG00000004869	-	95	41.279	Ictidomys_tridecemlineatus
ENSCSAVG00000000269	-	87	42.405	ENSJJAG00000017655	Nop16	99	39.888	Jaculus_jaculus
ENSCSAVG00000000269	-	93	39.053	ENSKMAG00000006164	nop16	95	39.645	Kryptolebias_marmoratus
ENSCSAVG00000000269	-	93	41.176	ENSLBEG00000018355	nop16	77	41.176	Labrus_bergylta
ENSCSAVG00000000269	-	95	42.529	ENSLACG00000014884	nop16	98	42.529	Latimeria_chalumnae
ENSCSAVG00000000269	-	75	40.146	ENSLOCG00000012348	nop16	94	41.176	Lepisosteus_oculatus
ENSCSAVG00000000269	-	93	42.012	ENSLAFG00000017886	-	95	42.012	Loxodonta_africana
ENSCSAVG00000000269	-	73	40.152	ENSMAMG00000021868	nop16	95	39.053	Mastacembelus_armatus
ENSCSAVG00000000269	-	93	41.420	ENSMZEG00005012112	nop16	95	42.604	Maylandia_zebra
ENSCSAVG00000000269	-	84	41.176	ENSMAUG00000015569	-	80	43.066	Mesocricetus_auratus
ENSCSAVG00000000269	-	93	41.176	ENSMOCG00000020788	Nop16	95	41.176	Microtus_ochrogaster
ENSCSAVG00000000269	-	93	41.040	ENSMMOG00000016054	nop16	98	41.040	Mola_mola
ENSCSAVG00000000269	-	93	40.936	ENSMODG00000005214	-	95	40.936	Monodelphis_domestica
ENSCSAVG00000000269	-	75	38.571	ENSMALG00000021263	nop16	95	38.150	Monopterus_albus
ENSCSAVG00000000269	-	93	41.765	MGP_CAROLIEiJ_G0018538	Nop16	95	41.765	Mus_caroli
ENSCSAVG00000000269	-	93	41.176	ENSMUSG00000025869	Nop16	95	41.176	Mus_musculus
ENSCSAVG00000000269	-	94	41.279	MGP_PahariEiJ_G0019603	Nop16	96	41.279	Mus_pahari
ENSCSAVG00000000269	-	93	41.176	MGP_SPRETEiJ_G0019418	Nop16	95	41.176	Mus_spretus
ENSCSAVG00000000269	-	93	42.012	ENSMPUG00000016964	-	95	42.012	Mustela_putorius_furo
ENSCSAVG00000000269	-	93	42.353	ENSMPUG00000012552	-	95	42.353	Mustela_putorius_furo
ENSCSAVG00000000269	-	87	42.675	ENSMLUG00000003504	-	88	42.675	Myotis_lucifugus
ENSCSAVG00000000269	-	93	41.765	ENSNGAG00000018045	Nop16	95	41.765	Nannospalax_galili
ENSCSAVG00000000269	-	96	40.571	ENSNBRG00000015181	nop16	99	41.714	Neolamprologus_brichardi
ENSCSAVG00000000269	-	93	42.941	ENSODEG00000009586	-	95	42.941	Octodon_degus
ENSCSAVG00000000269	-	93	40.828	ENSONIG00000016417	nop16	95	42.012	Oreochromis_niloticus
ENSCSAVG00000000269	-	93	42.353	ENSOCUG00000013171	-	95	42.353	Oryctolagus_cuniculus
ENSCSAVG00000000269	-	84	38.411	ENSORLG00000026611	nop16	95	38.690	Oryzias_latipes
ENSCSAVG00000000269	-	93	39.881	ENSOMEG00000023001	nop16	95	40.476	Oryzias_melastigma
ENSCSAVG00000000269	-	93	42.941	ENSOGAG00000000824	-	95	42.941	Otolemur_garnettii
ENSCSAVG00000000269	-	93	41.176	ENSOARG00000002165	-	95	41.176	Ovis_aries
ENSCSAVG00000000269	-	93	43.529	ENSPPAG00000035473	-	95	43.529	Pan_paniscus
ENSCSAVG00000000269	-	93	42.353	ENSPPRG00000016600	-	95	42.353	Panthera_pardus
ENSCSAVG00000000269	-	93	42.941	ENSPTIG00000011708	-	95	42.941	Panthera_tigris_altaica
ENSCSAVG00000000269	-	93	43.529	ENSPTRG00000017560	NOP16	95	43.529	Pan_troglodytes
ENSCSAVG00000000269	-	75	38.060	ENSPKIG00000009587	nop16	94	37.126	Paramormyrops_kingsleyae
ENSCSAVG00000000269	-	71	42.105	ENSPSIG00000013546	-	91	42.105	Pelodiscus_sinensis
ENSCSAVG00000000269	-	87	42.593	ENSPMGG00000003443	nop16	92	42.593	Periophthalmus_magnuspinnatus
ENSCSAVG00000000269	-	93	41.176	ENSPEMG00000020268	Nop16	95	41.176	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000269	-	93	40.351	ENSPCIG00000009782	-	96	40.351	Phascolarctos_cinereus
ENSCSAVG00000000269	-	93	38.824	ENSPFOG00000010549	nop16	95	38.824	Poecilia_formosa
ENSCSAVG00000000269	-	75	38.686	ENSPLAG00000007124	nop16	69	38.686	Poecilia_latipinna
ENSCSAVG00000000269	-	93	38.824	ENSPMEG00000008611	nop16	95	38.824	Poecilia_mexicana
ENSCSAVG00000000269	-	93	39.306	ENSPREG00000012940	nop16	95	39.306	Poecilia_reticulata
ENSCSAVG00000000269	-	93	42.941	ENSPPYG00000016070	-	95	42.941	Pongo_abelii
ENSCSAVG00000000269	-	93	41.420	ENSPNYG00000013529	nop16	95	42.604	Pundamilia_nyererei
ENSCSAVG00000000269	-	90	38.095	ENSPNAG00000016233	nop16	94	39.877	Pygocentrus_nattereri
ENSCSAVG00000000269	-	87	42.405	ENSRNOG00000017284	Nop16	88	42.405	Rattus_norvegicus
ENSCSAVG00000000269	-	93	40.351	ENSSHAG00000001724	-	95	40.351	Sarcophilus_harrisii
ENSCSAVG00000000269	-	75	40.876	ENSSFOG00015010537	nop16	76	39.181	Scleropages_formosus
ENSCSAVG00000000269	-	75	41.176	ENSSDUG00000022349	nop16	72	41.860	Seriola_dumerili
ENSCSAVG00000000269	-	75	40.714	ENSSLDG00000025171	nop16	72	41.353	Seriola_lalandi_dorsalis
ENSCSAVG00000000269	-	71	34.351	ENSSARG00000006699	-	61	34.351	Sorex_araneus
ENSCSAVG00000000269	-	87	42.405	ENSSPUG00000006508	-	88	42.405	Sphenodon_punctatus
ENSCSAVG00000000269	-	87	41.026	ENSSPAG00000011772	nop16	67	42.857	Stegastes_partitus
ENSCSAVG00000000269	-	93	41.765	ENSSSCG00000029577	-	95	41.765	Sus_scrofa
ENSCSAVG00000000269	-	86	40.252	ENSTGUG00000000543	-	88	40.252	Taeniopygia_guttata
ENSCSAVG00000000269	-	73	40.152	ENSTRUG00000020255	nop16	95	40.237	Takifugu_rubripes
ENSCSAVG00000000269	-	73	42.537	ENSTNIG00000007616	nop16	95	42.105	Tetraodon_nigroviridis
ENSCSAVG00000000269	-	93	41.176	ENSUAMG00000005139	-	95	41.176	Ursus_americanus
ENSCSAVG00000000269	-	87	43.038	ENSVVUG00000001697	-	84	43.038	Vulpes_vulpes
ENSCSAVG00000000269	-	93	38.095	ENSXETG00000022342	nop16	98	38.690	Xenopus_tropicalis
ENSCSAVG00000000269	-	93	38.462	ENSXCOG00000018829	nop16	96	38.462	Xiphophorus_couchianus
ENSCSAVG00000000269	-	93	39.053	ENSXMAG00000029113	nop16	95	39.053	Xiphophorus_maculatus