EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000371 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 9580 bases
Position: chrreftig_302:20980-30559
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000673	RRM_1	PF00076.22	4.6e-18	1	2
ENSCSAVP00000000673	RRM_1	PF00076.22	4.6e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000680	-	1386	-	ENSCSAVP00000000673	462 (aa)	-	H2Y5S5

Gene Model

Click here to download ENSCSAVG00000000371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000371	-	57	53.962	ENSG00000102241	HTATSF1	80	39.894	Homo_sapiens
ENSCSAVG00000000371	-	98	37.473	ENSAPOG00000009823	htatsf1	87	38.126	Acanthochromis_polyacanthus
ENSCSAVG00000000371	-	97	39.387	ENSACIG00000020459	htatsf1	88	40.263	Amphilophus_citrinellus
ENSCSAVG00000000371	-	96	39.421	ENSAOCG00000020994	htatsf1	86	38.998	Amphiprion_ocellaris
ENSCSAVG00000000371	-	96	39.421	ENSAPEG00000016432	htatsf1	87	39.651	Amphiprion_percula
ENSCSAVG00000000371	-	98	39.440	ENSATEG00000008903	htatsf1	89	40.086	Anabas_testudineus
ENSCSAVG00000000371	-	79	42.779	ENSAPLG00000012401	HTATSF1	82	43.597	Anas_platyrhynchos
ENSCSAVG00000000371	-	58	53.846	ENSACAG00000009346	HTATSF1	68	54.945	Anolis_carolinensis
ENSCSAVG00000000371	-	98	39.956	ENSACLG00000008096	htatsf1	88	41.266	Astatotilapia_calliptera
ENSCSAVG00000000371	-	77	43.455	ENSAMXG00000008387	htatsf1	89	43.717	Astyanax_mexicanus
ENSCSAVG00000000371	-	53	39.024	WBGene00022025	Y65B4A.1	79	34.746	Caenorhabditis_elegans
ENSCSAVG00000000371	-	74	45.506	ENSCPBG00000026092	HTATSF1	79	45.787	Chrysemys_picta_bellii
ENSCSAVG00000000371	-	98	61.739	ENSCING00000005914	-	93	61.957	Ciona_intestinalis
ENSCSAVG00000000371	-	75	42.818	ENSCVAG00000014070	htatsf1	88	43.631	Cyprinodon_variegatus
ENSCSAVG00000000371	-	93	47.312	ENSDARG00000056649	htatsf1	89	47.581	Danio_rerio
ENSCSAVG00000000371	-	63	42.466	FBgn0037081	barc	72	37.129	Drosophila_melanogaster
ENSCSAVG00000000371	-	84	37.437	ENSEBUG00000001534	htatsf1	77	38.191	Eptatretus_burgeri
ENSCSAVG00000000371	-	87	45.739	ENSELUG00000005486	htatsf1	75	46.023	Esox_lucius
ENSCSAVG00000000371	-	82	44.974	ENSFALG00000003728	HTATSF1	84	42.927	Ficedula_albicollis
ENSCSAVG00000000371	-	76	42.318	ENSFHEG00000020286	htatsf1	84	43.396	Fundulus_heteroclitus
ENSCSAVG00000000371	-	89	38.298	ENSGMOG00000016444	htatsf1	98	38.534	Gadus_morhua
ENSCSAVG00000000371	-	80	43.396	ENSGALG00000006410	HTATSF1	82	40.406	Gallus_gallus
ENSCSAVG00000000371	-	98	39.056	ENSGAFG00000003041	htatsf1	87	43.251	Gambusia_affinis
ENSCSAVG00000000371	-	92	41.287	ENSGACG00000020459	htatsf1	91	41.555	Gasterosteus_aculeatus
ENSCSAVG00000000371	-	98	40.175	ENSHBUG00000004392	htatsf1	86	42.094	Haplochromis_burtoni
ENSCSAVG00000000371	-	87	43.137	ENSHCOG00000009056	htatsf1	89	43.646	Hippocampus_comes
ENSCSAVG00000000371	-	89	46.110	ENSIPUG00000017828	htatsf1	81	46.398	Ictalurus_punctatus
ENSCSAVG00000000371	-	78	42.377	ENSKMAG00000007622	htatsf1	92	43.411	Kryptolebias_marmoratus
ENSCSAVG00000000371	-	98	42.432	ENSLBEG00000001154	htatsf1	88	42.933	Labrus_bergylta
ENSCSAVG00000000371	-	95	44.722	ENSLACG00000015989	HTATSF1	84	44.722	Latimeria_chalumnae
ENSCSAVG00000000371	-	87	38.571	ENSLOCG00000015118	htatsf1	82	38.571	Lepisosteus_oculatus
ENSCSAVG00000000371	-	96	40.133	ENSMAMG00000021225	htatsf1	88	40.798	Mastacembelus_armatus
ENSCSAVG00000000371	-	98	40.175	ENSMZEG00005000485	htatsf1	86	42.094	Maylandia_zebra
ENSCSAVG00000000371	-	80	43.396	ENSMGAG00000003558	HTATSF1	80	44.205	Meleagris_gallopavo
ENSCSAVG00000000371	-	76	42.973	ENSMMOG00000011013	htatsf1	83	43.243	Mola_mola
ENSCSAVG00000000371	-	75	45.892	ENSMODG00000014087	-	77	46.459	Monodelphis_domestica
ENSCSAVG00000000371	-	50	47.500	ENSMODG00000000199	-	81	47.500	Monodelphis_domestica
ENSCSAVG00000000371	-	76	42.473	ENSMALG00000019977	htatsf1	88	38.395	Monopterus_albus
ENSCSAVG00000000371	-	98	40.175	ENSNBRG00000003818	htatsf1	88	41.485	Neolamprologus_brichardi
ENSCSAVG00000000371	-	84	47.500	ENSMEUG00000004133	-	92	46.240	Notamacropus_eugenii
ENSCSAVG00000000371	-	93	43.200	ENSONIG00000008638	htatsf1	88	44.267	Oreochromis_niloticus
ENSCSAVG00000000371	-	73	46.154	ENSOANG00000011674	-	83	46.154	Ornithorhynchus_anatinus
ENSCSAVG00000000371	-	77	43.081	ENSORLG00000002356	htatsf1	90	44.125	Oryzias_latipes
ENSCSAVG00000000371	-	77	43.342	ENSORLG00020017818	htatsf1	81	44.386	Oryzias_latipes_hni
ENSCSAVG00000000371	-	75	43.169	ENSORLG00015002268	htatsf1	87	44.536	Oryzias_latipes_hsok
ENSCSAVG00000000371	-	94	43.264	ENSOMEG00000007564	htatsf1	91	44.301	Oryzias_melastigma
ENSCSAVG00000000371	-	77	42.391	ENSOARG00000000481	-	50	38.810	Ovis_aries
ENSCSAVG00000000371	-	98	40.773	ENSPKIG00000024852	htatsf1	88	45.730	Paramormyrops_kingsleyae
ENSCSAVG00000000371	-	60	51.087	ENSPSIG00000010192	HTATSF1	77	52.555	Pelodiscus_sinensis
ENSCSAVG00000000371	-	93	40.897	ENSPMGG00000006172	htatsf1	90	41.689	Periophthalmus_magnuspinnatus
ENSCSAVG00000000371	-	91	44.568	ENSPCIG00000018896	-	86	45.251	Phascolarctos_cinereus
ENSCSAVG00000000371	-	76	44.875	ENSPCIG00000030173	-	82	45.152	Phascolarctos_cinereus
ENSCSAVG00000000371	-	98	39.400	ENSPFOG00000007871	htatsf1	86	40.257	Poecilia_formosa
ENSCSAVG00000000371	-	99	38.689	ENSPLAG00000007532	htatsf1	90	39.323	Poecilia_latipinna
ENSCSAVG00000000371	-	98	39.186	ENSPMEG00000000352	htatsf1	89	40.693	Poecilia_mexicana
ENSCSAVG00000000371	-	93	43.817	ENSPREG00000007811	htatsf1	89	40.343	Poecilia_reticulata
ENSCSAVG00000000371	-	98	40.393	ENSPNYG00000016693	htatsf1	88	41.703	Pundamilia_nyererei
ENSCSAVG00000000371	-	77	44.044	ENSPNAG00000006166	htatsf1	90	40.977	Pygocentrus_nattereri
ENSCSAVG00000000371	-	91	45.506	ENSSHAG00000006440	-	98	45.506	Sarcophilus_harrisii
ENSCSAVG00000000371	-	76	46.027	ENSSHAG00000018908	-	79	47.500	Sarcophilus_harrisii
ENSCSAVG00000000371	-	93	46.927	ENSSFOG00015012002	htatsf1	83	47.486	Scleropages_formosus
ENSCSAVG00000000371	-	87	44.382	ENSSMAG00000002970	htatsf1	87	43.935	Scophthalmus_maximus
ENSCSAVG00000000371	-	92	37.757	ENSSDUG00000020002	htatsf1	88	39.583	Seriola_dumerili
ENSCSAVG00000000371	-	90	40.947	ENSSLDG00000016880	htatsf1	86	40.089	Seriola_lalandi_dorsalis
ENSCSAVG00000000371	-	78	41.444	ENSSARG00000005193	HTATSF1	51	42.246	Sorex_araneus
ENSCSAVG00000000371	-	74	43.503	ENSSPUG00000014767	HTATSF1	82	44.633	Sphenodon_punctatus
ENSCSAVG00000000371	-	91	43.056	ENSSPAG00000000732	htatsf1	87	39.869	Stegastes_partitus
ENSCSAVG00000000371	-	76	44.414	ENSTGUG00000002099	HTATSF1	88	43.979	Taeniopygia_guttata
ENSCSAVG00000000371	-	91	43.597	ENSTRUG00000013383	htatsf1	89	43.869	Takifugu_rubripes
ENSCSAVG00000000371	-	92	43.014	ENSTNIG00000016140	htatsf1	88	43.836	Tetraodon_nigroviridis
ENSCSAVG00000000371	-	70	43.293	ENSTTRG00000002269	HTATSF1	55	43.293	Tursiops_truncatus
ENSCSAVG00000000371	-	77	44.324	ENSXETG00000019749	htatsf1	69	44.865	Xenopus_tropicalis
ENSCSAVG00000000371	-	98	36.939	ENSXCOG00000006912	htatsf1	83	44.959	Xiphophorus_couchianus
ENSCSAVG00000000371	-	93	44.959	ENSXMAG00000000490	htatsf1	89	45.777	Xiphophorus_maculatus