EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000409 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1801 bases
Position: chrreftig_302:252523-254323
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000725	RRM_1	PF00076.22	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000733	-	557	-	ENSCSAVP00000000725	127 (aa)	-	H2Y5X7

Gene Model

Click here to download ENSCSAVG00000000409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000409	-	81	38.938	ENSG00000119446	RBM18	55	38.938	Homo_sapiens
ENSCSAVG00000000409	-	76	39.000	ENSAPOG00000001987	rbm18	52	36.893	Acanthochromis_polyacanthus
ENSCSAVG00000000409	-	81	38.938	ENSAMEG00000000772	RBM18	55	38.938	Ailuropoda_melanoleuca
ENSCSAVG00000000409	-	76	37.624	ENSAOCG00000006762	rbm18	51	37.624	Amphiprion_ocellaris
ENSCSAVG00000000409	-	80	37.037	ENSAPEG00000007972	rbm18	55	37.037	Amphiprion_percula
ENSCSAVG00000000409	-	83	34.862	ENSATEG00000019164	rbm18	55	34.862	Anabas_testudineus
ENSCSAVG00000000409	-	81	38.938	ENSANAG00000035441	RBM18	55	38.938	Aotus_nancymaae
ENSCSAVG00000000409	-	80	36.697	ENSACLG00000019848	rbm18	55	36.697	Astatotilapia_calliptera
ENSCSAVG00000000409	-	83	37.037	ENSAMXG00000035574	rbm18	56	37.037	Astyanax_mexicanus
ENSCSAVG00000000409	-	81	38.053	ENSBTAG00000016367	RBM18	55	38.053	Bos_taurus
ENSCSAVG00000000409	-	81	38.938	ENSCJAG00000046355	RBM18	55	38.938	Callithrix_jacchus
ENSCSAVG00000000409	-	81	38.938	ENSCAFG00000030041	RBM18	55	38.938	Canis_familiaris
ENSCSAVG00000000409	-	81	38.938	ENSCAFG00020015174	RBM18	55	38.938	Canis_lupus_dingo
ENSCSAVG00000000409	-	81	40.909	ENSCHIG00000026444	RBM18	55	40.909	Capra_hircus
ENSCSAVG00000000409	-	81	38.938	ENSTSYG00000030353	RBM18	55	38.938	Carlito_syrichta
ENSCSAVG00000000409	-	81	38.938	ENSCPOG00000038004	RBM18	55	38.938	Cavia_porcellus
ENSCSAVG00000000409	-	81	38.938	ENSCCAG00000035467	RBM18	55	38.938	Cebus_capucinus
ENSCSAVG00000000409	-	81	38.938	ENSCATG00000035634	RBM18	55	38.938	Cercocebus_atys
ENSCSAVG00000000409	-	81	39.815	ENSCLAG00000010773	RBM18	55	39.815	Chinchilla_lanigera
ENSCSAVG00000000409	-	62	40.449	ENSCSAG00000013373	RBM18	58	40.449	Chlorocebus_sabaeus
ENSCSAVG00000000409	-	81	39.815	ENSCHOG00000001341	RBM18	68	39.815	Choloepus_hoffmanni
ENSCSAVG00000000409	-	81	40.909	ENSCPBG00000009885	RBM18	54	40.909	Chrysemys_picta_bellii
ENSCSAVG00000000409	-	94	57.851	ENSCING00000010157	-	60	57.265	Ciona_intestinalis
ENSCSAVG00000000409	-	81	38.938	ENSCANG00000029590	RBM18	55	38.938	Colobus_angolensis_palliatus
ENSCSAVG00000000409	-	81	38.938	ENSCGRG00001014593	Rbm18	55	38.938	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000409	-	81	38.938	ENSCGRG00000012247	Rbm18	59	38.938	Cricetulus_griseus_crigri
ENSCSAVG00000000409	-	83	36.697	ENSCSEG00000017587	rbm18	55	36.697	Cynoglossus_semilaevis
ENSCSAVG00000000409	-	80	40.000	ENSDARG00000044255	rbm18	54	40.000	Danio_rerio
ENSCSAVG00000000409	-	81	38.053	ENSDNOG00000031658	RBM18	55	38.053	Dasypus_novemcinctus
ENSCSAVG00000000409	-	81	38.938	ENSDORG00000028540	Rbm18	55	38.938	Dipodomys_ordii
ENSCSAVG00000000409	-	81	39.252	ENSEBUG00000009127	rbm18	68	37.121	Eptatretus_burgeri
ENSCSAVG00000000409	-	81	38.938	ENSEASG00005021084	RBM18	55	38.938	Equus_asinus_asinus
ENSCSAVG00000000409	-	81	38.938	ENSECAG00000024639	RBM18	55	38.938	Equus_caballus
ENSCSAVG00000000409	-	81	36.538	ENSELUG00000005876	rbm18	55	36.538	Esox_lucius
ENSCSAVG00000000409	-	81	38.938	ENSFCAG00000037774	RBM18	55	38.938	Felis_catus
ENSCSAVG00000000409	-	84	39.474	ENSFALG00000001940	RBM18	68	39.474	Ficedula_albicollis
ENSCSAVG00000000409	-	81	38.938	ENSFDAG00000012679	RBM18	55	38.938	Fukomys_damarensis
ENSCSAVG00000000409	-	80	37.615	ENSFHEG00000012457	rbm18	55	37.615	Fundulus_heteroclitus
ENSCSAVG00000000409	-	81	33.036	ENSGMOG00000019735	rbm18	55	33.036	Gadus_morhua
ENSCSAVG00000000409	-	84	39.474	ENSGALG00000028167	RBM18	57	39.474	Gallus_gallus
ENSCSAVG00000000409	-	80	39.252	ENSGAFG00000007767	rbm18	54	39.252	Gambusia_affinis
ENSCSAVG00000000409	-	76	32.710	ENSGACG00000017348	rbm18	52	32.710	Gasterosteus_aculeatus
ENSCSAVG00000000409	-	81	40.909	ENSGAGG00000018318	RBM18	54	40.909	Gopherus_agassizii
ENSCSAVG00000000409	-	81	38.938	ENSGGOG00000011052	RBM18	55	38.938	Gorilla_gorilla
ENSCSAVG00000000409	-	80	36.697	ENSHBUG00000015237	rbm18	55	36.697	Haplochromis_burtoni
ENSCSAVG00000000409	-	81	38.938	ENSHGLG00000011073	RBM18	55	38.938	Heterocephalus_glaber_female
ENSCSAVG00000000409	-	81	38.938	ENSHGLG00100005536	RBM18	55	38.938	Heterocephalus_glaber_male
ENSCSAVG00000000409	-	81	34.513	ENSHGLG00100006247	-	59	34.513	Heterocephalus_glaber_male
ENSCSAVG00000000409	-	83	33.333	ENSHCOG00000003148	rbm18	56	33.333	Hippocampus_comes
ENSCSAVG00000000409	-	81	38.938	ENSSTOG00000022388	-	55	38.938	Ictidomys_tridecemlineatus
ENSCSAVG00000000409	-	86	36.585	ENSSTOG00000032266	-	62	36.585	Ictidomys_tridecemlineatus
ENSCSAVG00000000409	-	66	39.362	ENSJJAG00000009581	-	55	39.362	Jaculus_jaculus
ENSCSAVG00000000409	-	81	35.398	ENSJJAG00000010974	-	55	35.398	Jaculus_jaculus
ENSCSAVG00000000409	-	81	38.938	ENSLAFG00000012134	RBM18	55	38.938	Loxodonta_africana
ENSCSAVG00000000409	-	81	38.938	ENSMFAG00000000443	RBM18	55	38.938	Macaca_fascicularis
ENSCSAVG00000000409	-	81	38.938	ENSMMUG00000011455	RBM18	55	38.938	Macaca_mulatta
ENSCSAVG00000000409	-	81	38.938	ENSMNEG00000035374	RBM18	55	38.938	Macaca_nemestrina
ENSCSAVG00000000409	-	81	38.938	ENSMLEG00000043105	RBM18	55	38.938	Mandrillus_leucophaeus
ENSCSAVG00000000409	-	83	35.780	ENSMAMG00000009239	rbm18	55	35.780	Mastacembelus_armatus
ENSCSAVG00000000409	-	80	37.383	ENSMZEG00005017921	rbm18	54	37.383	Maylandia_zebra
ENSCSAVG00000000409	-	81	40.909	ENSMGAG00000016888	RBM18	58	40.909	Meleagris_gallopavo
ENSCSAVG00000000409	-	81	38.053	ENSMAUG00000021365	Rbm18	55	38.053	Mesocricetus_auratus
ENSCSAVG00000000409	-	81	38.938	ENSMICG00000046793	RBM18	55	38.938	Microcebus_murinus
ENSCSAVG00000000409	-	81	38.938	ENSMOCG00000000613	Rbm18	55	38.938	Microtus_ochrogaster
ENSCSAVG00000000409	-	80	33.333	ENSMMOG00000021319	rbm18	53	33.333	Mola_mola
ENSCSAVG00000000409	-	84	39.474	ENSMODG00000019688	RBM18	71	39.474	Monodelphis_domestica
ENSCSAVG00000000409	-	83	35.135	ENSMALG00000017766	rbm18	55	35.135	Monopterus_albus
ENSCSAVG00000000409	-	81	38.053	MGP_CAROLIEiJ_G0023488	Rbm18	55	38.053	Mus_caroli
ENSCSAVG00000000409	-	81	38.053	ENSMUSG00000026889	Rbm18	55	38.053	Mus_musculus
ENSCSAVG00000000409	-	81	38.053	MGP_PahariEiJ_G0024945	Rbm18	55	38.053	Mus_pahari
ENSCSAVG00000000409	-	81	38.053	MGP_SPRETEiJ_G0024405	Rbm18	55	38.053	Mus_spretus
ENSCSAVG00000000409	-	81	38.938	ENSMPUG00000007246	RBM18	55	38.938	Mustela_putorius_furo
ENSCSAVG00000000409	-	81	38.938	ENSMLUG00000004794	-	55	38.938	Myotis_lucifugus
ENSCSAVG00000000409	-	81	38.938	ENSMLUG00000013224	-	55	38.938	Myotis_lucifugus
ENSCSAVG00000000409	-	81	38.938	ENSNGAG00000000041	Rbm18	55	38.938	Nannospalax_galili
ENSCSAVG00000000409	-	80	36.697	ENSNBRG00000021128	rbm18	55	36.697	Neolamprologus_brichardi
ENSCSAVG00000000409	-	81	38.938	ENSNLEG00000017174	RBM18	55	38.938	Nomascus_leucogenys
ENSCSAVG00000000409	-	81	38.053	ENSOPRG00000010381	RBM18	55	38.053	Ochotona_princeps
ENSCSAVG00000000409	-	81	38.938	ENSODEG00000002055	RBM18	55	38.938	Octodon_degus
ENSCSAVG00000000409	-	80	37.383	ENSONIG00000003723	rbm18	54	37.383	Oreochromis_niloticus
ENSCSAVG00000000409	-	81	38.938	ENSOANG00000008200	RBM18	55	38.938	Ornithorhynchus_anatinus
ENSCSAVG00000000409	-	81	38.938	ENSOCUG00000008527	RBM18	55	38.938	Oryctolagus_cuniculus
ENSCSAVG00000000409	-	80	39.623	ENSORLG00000009962	rbm18	53	39.623	Oryzias_latipes
ENSCSAVG00000000409	-	80	38.889	ENSORLG00020013452	rbm18	53	38.889	Oryzias_latipes_hni
ENSCSAVG00000000409	-	80	38.889	ENSORLG00015001711	rbm18	56	36.036	Oryzias_latipes_hsok
ENSCSAVG00000000409	-	80	39.623	ENSOMEG00000001492	rbm18	53	39.623	Oryzias_melastigma
ENSCSAVG00000000409	-	81	38.938	ENSOGAG00000015104	RBM18	55	38.938	Otolemur_garnettii
ENSCSAVG00000000409	-	81	38.053	ENSOARG00000014228	RBM18	55	38.053	Ovis_aries
ENSCSAVG00000000409	-	81	38.938	ENSPPAG00000023355	RBM18	55	38.938	Pan_paniscus
ENSCSAVG00000000409	-	81	38.938	ENSPPRG00000011360	RBM18	55	38.938	Panthera_pardus
ENSCSAVG00000000409	-	81	38.938	ENSPTIG00000007126	RBM18	55	38.938	Panthera_tigris_altaica
ENSCSAVG00000000409	-	81	38.938	ENSPTRG00000021323	RBM18	55	38.938	Pan_troglodytes
ENSCSAVG00000000409	-	81	38.938	ENSPANG00000025845	RBM18	55	38.938	Papio_anubis
ENSCSAVG00000000409	-	81	38.938	ENSPSIG00000013631	RBM18	55	38.938	Pelodiscus_sinensis
ENSCSAVG00000000409	-	80	38.318	ENSPMGG00000023951	rbm18	53	38.318	Periophthalmus_magnuspinnatus
ENSCSAVG00000000409	-	81	36.449	ENSPMAG00000000630	rbm18	63	36.449	Petromyzon_marinus
ENSCSAVG00000000409	-	83	38.739	ENSPCIG00000025526	RBM18	56	37.931	Phascolarctos_cinereus
ENSCSAVG00000000409	-	80	39.252	ENSPFOG00000019706	rbm18	54	39.252	Poecilia_formosa
ENSCSAVG00000000409	-	80	39.252	ENSPLAG00000005571	rbm18	54	39.252	Poecilia_latipinna
ENSCSAVG00000000409	-	80	39.252	ENSPMEG00000013977	rbm18	54	39.252	Poecilia_mexicana
ENSCSAVG00000000409	-	80	39.252	ENSPREG00000009157	rbm18	54	39.252	Poecilia_reticulata
ENSCSAVG00000000409	-	81	38.938	ENSPPYG00000019569	RBM18	55	38.938	Pongo_abelii
ENSCSAVG00000000409	-	81	38.938	ENSPCOG00000024474	RBM18	55	38.938	Propithecus_coquereli
ENSCSAVG00000000409	-	81	38.938	ENSPVAG00000000863	RBM18	55	38.938	Pteropus_vampyrus
ENSCSAVG00000000409	-	80	36.697	ENSPNYG00000012421	rbm18	55	36.697	Pundamilia_nyererei
ENSCSAVG00000000409	-	83	37.037	ENSPNAG00000017660	rbm18	56	37.037	Pygocentrus_nattereri
ENSCSAVG00000000409	-	81	38.938	ENSRNOG00000006763	Rbm18	55	38.938	Rattus_norvegicus
ENSCSAVG00000000409	-	81	38.938	ENSRBIG00000040177	RBM18	55	38.938	Rhinopithecus_bieti
ENSCSAVG00000000409	-	81	38.938	ENSRROG00000031364	RBM18	55	38.938	Rhinopithecus_roxellana
ENSCSAVG00000000409	-	81	38.938	ENSSBOG00000024806	RBM18	55	38.938	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000409	-	83	37.931	ENSSHAG00000012257	RBM18	56	37.931	Sarcophilus_harrisii
ENSCSAVG00000000409	-	83	38.318	ENSSFOG00015001100	rbm18	57	38.318	Scleropages_formosus
ENSCSAVG00000000409	-	76	31.776	ENSSMAG00000020138	rbm18	51	31.776	Scophthalmus_maximus
ENSCSAVG00000000409	-	80	36.792	ENSSDUG00000016203	rbm18	52	36.792	Seriola_dumerili
ENSCSAVG00000000409	-	76	36.634	ENSSLDG00000016329	rbm18	51	36.634	Seriola_lalandi_dorsalis
ENSCSAVG00000000409	-	100	36.691	ENSSPUG00000001601	RBM18	76	36.691	Sphenodon_punctatus
ENSCSAVG00000000409	-	76	37.624	ENSSPAG00000005394	rbm18	51	37.624	Stegastes_partitus
ENSCSAVG00000000409	-	81	38.053	ENSSSCG00000030089	RBM18	64	38.053	Sus_scrofa
ENSCSAVG00000000409	-	100	37.410	ENSTGUG00000006802	RBM18	87	37.410	Taeniopygia_guttata
ENSCSAVG00000000409	-	80	37.736	ENSTRUG00000005812	rbm18	54	37.736	Takifugu_rubripes
ENSCSAVG00000000409	-	76	33.645	ENSTNIG00000009141	rbm18	53	33.645	Tetraodon_nigroviridis
ENSCSAVG00000000409	-	81	38.938	ENSTBEG00000016520	RBM18	68	38.938	Tupaia_belangeri
ENSCSAVG00000000409	-	81	38.938	ENSUAMG00000014431	RBM18	55	38.938	Ursus_americanus
ENSCSAVG00000000409	-	81	38.938	ENSUMAG00000003445	RBM18	55	38.938	Ursus_maritimus
ENSCSAVG00000000409	-	81	38.938	ENSVPAG00000008618	RBM18	55	38.938	Vicugna_pacos
ENSCSAVG00000000409	-	81	38.938	ENSVVUG00000009442	RBM18	55	38.938	Vulpes_vulpes
ENSCSAVG00000000409	-	79	38.614	ENSXETG00000016328	rbm18	53	38.614	Xenopus_tropicalis
ENSCSAVG00000000409	-	80	39.252	ENSXMAG00000003538	rbm18	54	39.252	Xiphophorus_maculatus