EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000418 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 6634 bases
Position: chrreftig_285:41509-48142
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000742	Met_10	PF02475.16	3.8e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000750	-	1482	-	ENSCSAVP00000000742	457 (aa)	-	H2Y5Z4

Gene Model

Click here to download ENSCSAVG00000000418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000418	-	95	41.256	ENSG00000126814	TRMT5	85	40.798	Homo_sapiens
ENSCSAVG00000000418	-	94	44.773	ENSAPOG00000015490	trmt5	97	44.773	Acanthochromis_polyacanthus
ENSCSAVG00000000418	-	95	42.094	ENSAMEG00000002979	TRMT5	84	42.094	Ailuropoda_melanoleuca
ENSCSAVG00000000418	-	94	44.977	ENSACIG00000024216	trmt5	97	44.977	Amphilophus_citrinellus
ENSCSAVG00000000418	-	94	45.330	ENSAOCG00000007757	trmt5	97	45.330	Amphiprion_ocellaris
ENSCSAVG00000000418	-	96	44.966	ENSAPEG00000022718	trmt5	97	45.538	Amphiprion_percula
ENSCSAVG00000000418	-	91	45.561	ENSATEG00000015576	trmt5	88	44.568	Anabas_testudineus
ENSCSAVG00000000418	-	89	44.630	ENSAPLG00000008002	TRMT5	81	44.630	Anas_platyrhynchos
ENSCSAVG00000000418	-	96	41.850	ENSACAG00000006533	TRMT5	85	41.850	Anolis_carolinensis
ENSCSAVG00000000418	-	100	40.512	ENSANAG00000024875	TRMT5	82	40.512	Aotus_nancymaae
ENSCSAVG00000000418	-	91	44.496	ENSACLG00000020216	trmt5	90	40.938	Astatotilapia_calliptera
ENSCSAVG00000000418	-	95	43.508	ENSAMXG00000021299	trmt5	88	43.508	Astyanax_mexicanus
ENSCSAVG00000000418	-	92	44.907	ENSBTAG00000011796	TRMT5	83	44.907	Bos_taurus
ENSCSAVG00000000418	-	92	33.114	WBGene00194707	C53A5.17	99	33.195	Caenorhabditis_elegans
ENSCSAVG00000000418	-	100	40.725	ENSCJAG00000019157	TRMT5	88	40.725	Callithrix_jacchus
ENSCSAVG00000000418	-	96	41.722	ENSCAFG00000015647	TRMT5	87	41.722	Canis_familiaris
ENSCSAVG00000000418	-	91	43.256	ENSCAFG00020008016	TRMT5	82	43.256	Canis_lupus_dingo
ENSCSAVG00000000418	-	96	43.653	ENSCHIG00000018801	TRMT5	86	43.653	Capra_hircus
ENSCSAVG00000000418	-	97	42.637	ENSTSYG00000001043	TRMT5	85	42.637	Carlito_syrichta
ENSCSAVG00000000418	-	98	35.054	ENSCAPG00000014642	TRMT5	87	35.054	Cavia_aperea
ENSCSAVG00000000418	-	98	41.720	ENSCPOG00000014396	TRMT5	88	41.720	Cavia_porcellus
ENSCSAVG00000000418	-	100	40.085	ENSCCAG00000037835	TRMT5	88	40.085	Cebus_capucinus
ENSCSAVG00000000418	-	96	41.556	ENSCATG00000045352	TRMT5	85	41.556	Cercocebus_atys
ENSCSAVG00000000418	-	96	41.333	ENSCLAG00000013155	TRMT5	89	41.333	Chinchilla_lanigera
ENSCSAVG00000000418	-	96	41.556	ENSCSAG00000014159	TRMT5	77	41.556	Chlorocebus_sabaeus
ENSCSAVG00000000418	-	79	45.013	ENSCHOG00000008128	-	89	45.013	Choloepus_hoffmanni
ENSCSAVG00000000418	-	96	42.984	ENSCPBG00000022359	TRMT5	85	42.984	Chrysemys_picta_bellii
ENSCSAVG00000000418	-	98	67.912	ENSCING00000018970	-	96	77.344	Ciona_intestinalis
ENSCSAVG00000000418	-	96	41.333	ENSCANG00000032648	TRMT5	85	41.333	Colobus_angolensis_palliatus
ENSCSAVG00000000418	-	96	42.188	ENSCGRG00001018337	TRMT5	96	42.188	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000418	-	96	42.188	ENSCGRG00000010454	Trmt5	85	42.188	Cricetulus_griseus_crigri
ENSCSAVG00000000418	-	89	44.578	ENSCSEG00000001533	trmt5	89	44.521	Cynoglossus_semilaevis
ENSCSAVG00000000418	-	95	44.820	ENSCVAG00000007630	trmt5	98	44.820	Cyprinodon_variegatus
ENSCSAVG00000000418	-	98	43.421	ENSDARG00000069278	trmt5	93	43.421	Danio_rerio
ENSCSAVG00000000418	-	92	44.676	ENSDNOG00000019211	TRMT5	80	44.676	Dasypus_novemcinctus
ENSCSAVG00000000418	-	94	42.308	ENSDORG00000015555	Trmt5	85	42.308	Dipodomys_ordii
ENSCSAVG00000000418	-	94	41.573	FBgn0052281	CG32281	91	41.573	Drosophila_melanogaster
ENSCSAVG00000000418	-	75	45.658	ENSETEG00000017163	TRMT5	70	45.658	Echinops_telfairi
ENSCSAVG00000000418	-	73	38.292	ENSEBUG00000002145	trmt5	60	38.441	Eptatretus_burgeri
ENSCSAVG00000000418	-	92	43.519	ENSEASG00005016123	TRMT5	81	43.519	Equus_asinus_asinus
ENSCSAVG00000000418	-	92	43.287	ENSECAG00000000057	TRMT5	81	43.287	Equus_caballus
ENSCSAVG00000000418	-	95	45.598	ENSELUG00000011314	trmt5	86	45.598	Esox_lucius
ENSCSAVG00000000418	-	96	42.198	ENSFCAG00000006820	TRMT5	83	42.198	Felis_catus
ENSCSAVG00000000418	-	92	43.519	ENSFALG00000003430	TRMT5	80	44.213	Ficedula_albicollis
ENSCSAVG00000000418	-	97	41.501	ENSFDAG00000018556	TRMT5	85	41.501	Fukomys_damarensis
ENSCSAVG00000000418	-	94	46.818	ENSFHEG00000008062	trmt5	89	46.818	Fundulus_heteroclitus
ENSCSAVG00000000418	-	94	42.825	ENSGMOG00000010858	trmt5	97	42.825	Gadus_morhua
ENSCSAVG00000000418	-	99	41.866	ENSGALG00000011904	TRMT5	88	41.866	Gallus_gallus
ENSCSAVG00000000418	-	94	44.851	ENSGAFG00000004103	trmt5	88	44.851	Gambusia_affinis
ENSCSAVG00000000418	-	94	45.000	ENSGACG00000008470	trmt5	94	52.297	Gasterosteus_aculeatus
ENSCSAVG00000000418	-	96	42.316	ENSGAGG00000023507	TRMT5	86	42.316	Gopherus_agassizii
ENSCSAVG00000000418	-	96	41.020	ENSGGOG00000006831	TRMT5	85	41.020	Gorilla_gorilla
ENSCSAVG00000000418	-	94	43.964	ENSHBUG00000023000	trmt5	89	43.964	Haplochromis_burtoni
ENSCSAVG00000000418	-	97	41.722	ENSHGLG00000013713	TRMT5	96	41.722	Heterocephalus_glaber_female
ENSCSAVG00000000418	-	97	41.203	ENSHGLG00100002392	TRMT5	84	41.203	Heterocephalus_glaber_male
ENSCSAVG00000000418	-	91	45.647	ENSHCOG00000012203	trmt5	96	46.377	Hippocampus_comes
ENSCSAVG00000000418	-	96	44.924	ENSIPUG00000002612	trmt5	91	45.140	Ictalurus_punctatus
ENSCSAVG00000000418	-	97	42.511	ENSSTOG00000011865	TRMT5	85	42.511	Ictidomys_tridecemlineatus
ENSCSAVG00000000418	-	91	43.427	ENSJJAG00000009935	Trmt5	94	43.427	Jaculus_jaculus
ENSCSAVG00000000418	-	94	45.103	ENSKMAG00000005992	trmt5	98	45.103	Kryptolebias_marmoratus
ENSCSAVG00000000418	-	94	44.091	ENSLBEG00000023240	trmt5	97	44.091	Labrus_bergylta
ENSCSAVG00000000418	-	96	43.237	ENSLACG00000018464	TRMT5	97	43.237	Latimeria_chalumnae
ENSCSAVG00000000418	-	96	44.643	ENSLOCG00000010120	trmt5	97	44.643	Lepisosteus_oculatus
ENSCSAVG00000000418	-	92	43.548	ENSLAFG00000003616	TRMT5	81	43.548	Loxodonta_africana
ENSCSAVG00000000418	-	96	41.556	ENSMFAG00000002940	TRMT5	85	41.556	Macaca_fascicularis
ENSCSAVG00000000418	-	97	37.665	ENSMMUG00000013611	TRMT5	85	37.665	Macaca_mulatta
ENSCSAVG00000000418	-	96	41.556	ENSMNEG00000000131	TRMT5	85	41.556	Macaca_nemestrina
ENSCSAVG00000000418	-	96	41.556	ENSMLEG00000043649	TRMT5	85	41.556	Mandrillus_leucophaeus
ENSCSAVG00000000418	-	94	45.309	ENSMAMG00000001758	trmt5	86	45.309	Mastacembelus_armatus
ENSCSAVG00000000418	-	94	43.736	ENSMZEG00005007457	trmt5	89	43.736	Maylandia_zebra
ENSCSAVG00000000418	-	95	43.115	ENSMGAG00000013565	TRMT5	84	43.115	Meleagris_gallopavo
ENSCSAVG00000000418	-	96	42.411	ENSMAUG00000016091	Trmt5	86	42.411	Mesocricetus_auratus
ENSCSAVG00000000418	-	97	42.070	ENSMICG00000044351	TRMT5	85	42.070	Microcebus_murinus
ENSCSAVG00000000418	-	96	42.411	ENSMOCG00000020904	Trmt5	86	42.411	Microtus_ochrogaster
ENSCSAVG00000000418	-	96	44.248	ENSMMOG00000012159	trmt5	88	44.248	Mola_mola
ENSCSAVG00000000418	-	94	44.091	ENSMODG00000008664	TRMT5	83	44.091	Monodelphis_domestica
ENSCSAVG00000000418	-	96	43.304	ENSMALG00000009533	trmt5	88	43.304	Monopterus_albus
ENSCSAVG00000000418	-	95	42.152	MGP_CAROLIEiJ_G0017843	Trmt5	85	42.152	Mus_caroli
ENSCSAVG00000000418	-	95	41.611	ENSMUSG00000034442	Trmt5	85	41.611	Mus_musculus
ENSCSAVG00000000418	-	95	42.342	MGP_PahariEiJ_G0029601	Trmt5	85	42.342	Mus_pahari
ENSCSAVG00000000418	-	95	41.611	MGP_SPRETEiJ_G0018690	Trmt5	85	41.611	Mus_spretus
ENSCSAVG00000000418	-	91	42.958	ENSMPUG00000006435	TRMT5	68	42.958	Mustela_putorius_furo
ENSCSAVG00000000418	-	91	43.794	ENSMLUG00000002357	TRMT5	80	43.794	Myotis_lucifugus
ENSCSAVG00000000418	-	92	42.824	ENSNGAG00000012691	Trmt5	83	42.824	Nannospalax_galili
ENSCSAVG00000000418	-	94	43.964	ENSNBRG00000009536	trmt5	97	43.964	Neolamprologus_brichardi
ENSCSAVG00000000418	-	96	41.463	ENSNLEG00000013805	TRMT5	85	41.463	Nomascus_leucogenys
ENSCSAVG00000000418	-	67	36.538	ENSMEUG00000004767	-	96	36.538	Notamacropus_eugenii
ENSCSAVG00000000418	-	73	47.246	ENSOPRG00000011719	TRMT5	67	47.246	Ochotona_princeps
ENSCSAVG00000000418	-	95	42.282	ENSODEG00000013922	TRMT5	88	42.282	Octodon_degus
ENSCSAVG00000000418	-	94	43.964	ENSONIG00000020115	trmt5	80	43.964	Oreochromis_niloticus
ENSCSAVG00000000418	-	96	42.222	ENSOCUG00000014281	TRMT5	86	42.222	Oryctolagus_cuniculus
ENSCSAVG00000000418	-	94	44.191	ENSORLG00000015734	trmt5	89	44.191	Oryzias_latipes
ENSCSAVG00000000418	-	94	43.964	ENSORLG00020009860	trmt5	89	43.964	Oryzias_latipes_hni
ENSCSAVG00000000418	-	94	44.647	ENSORLG00015008653	trmt5	98	44.706	Oryzias_latipes_hsok
ENSCSAVG00000000418	-	94	44.622	ENSOMEG00000006629	trmt5	89	44.622	Oryzias_melastigma
ENSCSAVG00000000418	-	97	41.943	ENSOGAG00000016088	TRMT5	85	41.943	Otolemur_garnettii
ENSCSAVG00000000418	-	97	43.297	ENSOARG00000021132	TRMT5	86	43.297	Ovis_aries
ENSCSAVG00000000418	-	96	41.020	ENSPPAG00000035176	TRMT5	85	41.020	Pan_paniscus
ENSCSAVG00000000418	-	96	42.198	ENSPPRG00000013336	TRMT5	84	42.198	Panthera_pardus
ENSCSAVG00000000418	-	88	43.405	ENSPTIG00000006744	TRMT5	83	43.405	Panthera_tigris_altaica
ENSCSAVG00000000418	-	96	41.020	ENSPTRG00000006415	TRMT5	85	41.020	Pan_troglodytes
ENSCSAVG00000000418	-	96	41.333	ENSPANG00000016605	TRMT5	85	41.333	Papio_anubis
ENSCSAVG00000000418	-	95	44.921	ENSPKIG00000018196	trmt5	95	44.295	Paramormyrops_kingsleyae
ENSCSAVG00000000418	-	96	42.316	ENSPSIG00000014128	TRMT5	84	42.316	Pelodiscus_sinensis
ENSCSAVG00000000418	-	95	44.695	ENSPMGG00000003882	trmt5	83	44.695	Periophthalmus_magnuspinnatus
ENSCSAVG00000000418	-	96	42.188	ENSPEMG00000022664	Trmt5	86	42.188	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000418	-	92	44.009	ENSPCIG00000020458	TRMT5	80	44.009	Phascolarctos_cinereus
ENSCSAVG00000000418	-	94	46.224	ENSPFOG00000008680	trmt5	97	46.224	Poecilia_formosa
ENSCSAVG00000000418	-	92	46.136	ENSPLAG00000014197	trmt5	89	46.136	Poecilia_latipinna
ENSCSAVG00000000418	-	94	46.224	ENSPMEG00000014848	trmt5	88	46.224	Poecilia_mexicana
ENSCSAVG00000000418	-	94	45.309	ENSPREG00000015503	trmt5	98	45.727	Poecilia_reticulata
ENSCSAVG00000000418	-	97	41.794	ENSPPYG00000005877	TRMT5	85	41.794	Pongo_abelii
ENSCSAVG00000000418	-	56	46.212	ENSPCAG00000006616	-	52	46.212	Procavia_capensis
ENSCSAVG00000000418	-	92	42.923	ENSPCOG00000017447	TRMT5	81	42.923	Propithecus_coquereli
ENSCSAVG00000000418	-	56	47.348	ENSPVAG00000015311	TRMT5	50	47.348	Pteropus_vampyrus
ENSCSAVG00000000418	-	94	43.964	ENSPNYG00000022005	trmt5	97	43.964	Pundamilia_nyererei
ENSCSAVG00000000418	-	96	44.719	ENSPNAG00000022427	trmt5	89	44.719	Pygocentrus_nattereri
ENSCSAVG00000000418	-	95	42.117	ENSRNOG00000007785	Trmt5	95	42.058	Rattus_norvegicus
ENSCSAVG00000000418	-	96	41.111	ENSRBIG00000033903	TRMT5	85	41.111	Rhinopithecus_bieti
ENSCSAVG00000000418	-	96	41.111	ENSRROG00000035334	TRMT5	85	41.111	Rhinopithecus_roxellana
ENSCSAVG00000000418	-	68	39.011	YHR070W	-	72	39.011	Saccharomyces_cerevisiae
ENSCSAVG00000000418	-	100	40.938	ENSSBOG00000027786	TRMT5	89	42.152	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000418	-	97	44.079	ENSSHAG00000003232	TRMT5	87	44.079	Sarcophilus_harrisii
ENSCSAVG00000000418	-	94	45.287	ENSSFOG00015013093	trmt5	97	45.205	Scleropages_formosus
ENSCSAVG00000000418	-	96	43.653	ENSSMAG00000001616	trmt5	90	43.653	Scophthalmus_maximus
ENSCSAVG00000000418	-	94	46.101	ENSSDUG00000019541	trmt5	85	46.101	Seriola_dumerili
ENSCSAVG00000000418	-	94	46.224	ENSSLDG00000001680	trmt5	97	46.224	Seriola_lalandi_dorsalis
ENSCSAVG00000000418	-	96	42.444	ENSSARG00000012431	TRMT5	84	42.444	Sorex_araneus
ENSCSAVG00000000418	-	96	42.129	ENSSPUG00000010098	TRMT5	87	42.129	Sphenodon_punctatus
ENSCSAVG00000000418	-	94	44.749	ENSSPAG00000012940	trmt5	90	44.749	Stegastes_partitus
ENSCSAVG00000000418	-	96	43.556	ENSSSCG00000024529	TRMT5	86	43.556	Sus_scrofa
ENSCSAVG00000000418	-	92	43.981	ENSTGUG00000012988	TRMT5	86	43.981	Taeniopygia_guttata
ENSCSAVG00000000418	-	97	42.667	ENSTRUG00000010888	trmt5	91	42.667	Takifugu_rubripes
ENSCSAVG00000000418	-	94	44.292	ENSTNIG00000017342	trmt5	96	44.292	Tetraodon_nigroviridis
ENSCSAVG00000000418	-	96	40.889	ENSTBEG00000005659	TRMT5	85	40.889	Tupaia_belangeri
ENSCSAVG00000000418	-	92	43.287	ENSTTRG00000013839	TRMT5	81	43.287	Tursiops_truncatus
ENSCSAVG00000000418	-	94	42.472	ENSUAMG00000023288	TRMT5	85	42.472	Ursus_americanus
ENSCSAVG00000000418	-	87	44.552	ENSUMAG00000013736	TRMT5	92	44.552	Ursus_maritimus
ENSCSAVG00000000418	-	91	43.427	ENSVPAG00000002392	TRMT5	80	43.427	Vicugna_pacos
ENSCSAVG00000000418	-	91	43.488	ENSVVUG00000029464	TRMT5	82	43.488	Vulpes_vulpes
ENSCSAVG00000000418	-	96	42.667	ENSXETG00000014455	trmt5	86	42.667	Xenopus_tropicalis
ENSCSAVG00000000418	-	94	44.394	ENSXCOG00000008547	trmt5	90	44.804	Xiphophorus_couchianus
ENSCSAVG00000000418	-	94	45.434	ENSXMAG00000013474	trmt5	91	45.853	Xiphophorus_maculatus