EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000440 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 5011 bases
Position: chrreftig_385:376962-381972
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000780	RNA_pol	PF00940.19	3.4e-141	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000789	-	459	-	ENSCSAVP00000000781	151 (aa)	-	H2Y633
ENSCSAVT00000000788	-	2401	-	ENSCSAVP00000000780	787 (aa)	-	H2Y632

Gene Model

Click here to download ENSCSAVG00000000440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000440's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000440	-	99	44.621	ENSG00000099821	POLRMT	81	57.282	Homo_sapiens
ENSCSAVG00000000440	-	99	44.376	ENSAPOG00000003942	polrmt	60	44.376	Acanthochromis_polyacanthus
ENSCSAVG00000000440	-	99	43.879	ENSAMEG00000002745	POLRMT	65	43.758	Ailuropoda_melanoleuca
ENSCSAVG00000000440	-	99	44.293	ENSACIG00000016078	polrmt	69	44.293	Amphilophus_citrinellus
ENSCSAVG00000000440	-	99	44.747	ENSAOCG00000020208	polrmt	61	44.472	Amphiprion_ocellaris
ENSCSAVG00000000440	-	99	44.747	ENSAPEG00000007949	polrmt	60	44.767	Amphiprion_percula
ENSCSAVG00000000440	-	99	44.908	ENSATEG00000024025	polrmt	64	44.280	Anabas_testudineus
ENSCSAVG00000000440	-	98	45.194	ENSAPLG00000003051	POLRMT	77	45.194	Anas_platyrhynchos
ENSCSAVG00000000440	-	99	44.010	ENSANAG00000032916	POLRMT	65	44.010	Aotus_nancymaae
ENSCSAVG00000000440	-	99	44.010	ENSACLG00000003766	polrmt	61	44.010	Astatotilapia_calliptera
ENSCSAVG00000000440	-	99	43.452	ENSAMXG00000018258	polrmt	63	43.452	Astyanax_mexicanus
ENSCSAVG00000000440	-	99	43.917	ENSBTAG00000015051	POLRMT	65	43.917	Bos_taurus
ENSCSAVG00000000440	-	74	41.534	WBGene00013680	rpom-1	54	40.881	Caenorhabditis_elegans
ENSCSAVG00000000440	-	99	43.542	ENSCJAG00000012913	POLRMT	65	43.542	Callithrix_jacchus
ENSCSAVG00000000440	-	99	44.186	ENSCAFG00000019711	POLRMT	65	44.186	Canis_familiaris
ENSCSAVG00000000440	-	99	44.186	ENSCAFG00020016843	POLRMT	67	44.186	Canis_lupus_dingo
ENSCSAVG00000000440	-	99	44.212	ENSCHIG00000013267	POLRMT	66	43.956	Capra_hircus
ENSCSAVG00000000440	-	99	42.737	ENSCAPG00000016900	POLRMT	69	48.281	Cavia_aperea
ENSCSAVG00000000440	-	99	43.263	ENSCPOG00000023061	POLRMT	66	44.020	Cavia_porcellus
ENSCSAVG00000000440	-	99	44.214	ENSCCAG00000025014	POLRMT	65	44.214	Cebus_capucinus
ENSCSAVG00000000440	-	99	43.696	ENSCATG00000040393	POLRMT	65	43.696	Cercocebus_atys
ENSCSAVG00000000440	-	99	42.752	ENSCLAG00000007473	POLRMT	56	42.752	Chinchilla_lanigera
ENSCSAVG00000000440	-	99	43.956	ENSCSAG00000012942	POLRMT	65	43.956	Chlorocebus_sabaeus
ENSCSAVG00000000440	-	98	44.654	ENSCPBG00000009869	POLRMT	69	44.403	Chrysemys_picta_bellii
ENSCSAVG00000000440	-	99	43.819	ENSCANG00000038011	POLRMT	65	43.819	Colobus_angolensis_palliatus
ENSCSAVG00000000440	-	99	43.849	ENSCGRG00001021311	Polrmt	64	49.361	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000440	-	99	43.849	ENSCGRG00000011134	Polrmt	66	43.849	Cricetulus_griseus_crigri
ENSCSAVG00000000440	-	99	44.020	ENSCSEG00000002734	polrmt	61	44.020	Cynoglossus_semilaevis
ENSCSAVG00000000440	-	94	45.443	ENSCVAG00000005949	polrmt	63	45.052	Cyprinodon_variegatus
ENSCSAVG00000000440	-	99	43.521	ENSDARG00000101220	polrmt	63	43.521	Danio_rerio
ENSCSAVG00000000440	-	98	42.360	ENSDORG00000014125	Polrmt	63	48.208	Dipodomys_ordii
ENSCSAVG00000000440	-	99	41.897	FBgn0261938	mtRNApol	60	42.381	Drosophila_melanogaster
ENSCSAVG00000000440	-	99	40.691	ENSETEG00000003476	POLRMT	65	40.447	Echinops_telfairi
ENSCSAVG00000000440	-	99	44.268	ENSEBUG00000013453	-	87	44.268	Eptatretus_burgeri
ENSCSAVG00000000440	-	99	43.337	ENSEASG00005021493	POLRMT	65	43.154	Equus_asinus_asinus
ENSCSAVG00000000440	-	99	43.032	ENSECAG00000032711	POLRMT	65	43.032	Equus_caballus
ENSCSAVG00000000440	-	99	42.701	ENSELUG00000019319	polrmt	60	42.701	Esox_lucius
ENSCSAVG00000000440	-	99	43.537	ENSFCAG00000018808	POLRMT	65	43.537	Felis_catus
ENSCSAVG00000000440	-	79	42.462	ENSFALG00000013910	POLRMT	60	42.462	Ficedula_albicollis
ENSCSAVG00000000440	-	99	43.366	ENSFDAG00000020312	POLRMT	62	43.366	Fukomys_damarensis
ENSCSAVG00000000440	-	99	43.681	ENSFHEG00000021239	polrmt	67	43.392	Fundulus_heteroclitus
ENSCSAVG00000000440	-	99	42.910	ENSGMOG00000011829	polrmt	68	42.910	Gadus_morhua
ENSCSAVG00000000440	-	98	45.093	ENSGALG00000001377	POLRMT	64	44.926	Gallus_gallus
ENSCSAVG00000000440	-	99	44.064	ENSGAFG00000003953	polrmt	61	44.064	Gambusia_affinis
ENSCSAVG00000000440	-	99	42.946	ENSGACG00000012957	polrmt	67	42.946	Gasterosteus_aculeatus
ENSCSAVG00000000440	-	98	44.375	ENSGAGG00000005522	POLRMT	69	44.375	Gopherus_agassizii
ENSCSAVG00000000440	-	77	55.975	ENSGGOG00000023264	-	61	55.975	Gorilla_gorilla
ENSCSAVG00000000440	-	99	43.888	ENSHBUG00000010005	polrmt	60	43.888	Haplochromis_burtoni
ENSCSAVG00000000440	-	99	43.489	ENSHGLG00000019286	POLRMT	60	43.489	Heterocephalus_glaber_female
ENSCSAVG00000000440	-	99	43.120	ENSHGLG00100005762	POLRMT	65	43.120	Heterocephalus_glaber_male
ENSCSAVG00000000440	-	99	44.363	ENSHCOG00000001565	polrmt	63	45.174	Hippocampus_comes
ENSCSAVG00000000440	-	99	44.200	ENSIPUG00000000789	polrmt	66	44.200	Ictalurus_punctatus
ENSCSAVG00000000440	-	94	43.995	ENSSTOG00000003431	POLRMT	61	51.473	Ictidomys_tridecemlineatus
ENSCSAVG00000000440	-	99	41.227	ENSJJAG00000012916	Polrmt	64	46.624	Jaculus_jaculus
ENSCSAVG00000000440	-	99	45.018	ENSKMAG00000004426	polrmt	62	45.018	Kryptolebias_marmoratus
ENSCSAVG00000000440	-	99	44.802	ENSLBEG00000016529	polrmt	60	44.802	Labrus_bergylta
ENSCSAVG00000000440	-	99	44.540	ENSLACG00000011518	POLRMT	66	44.540	Latimeria_chalumnae
ENSCSAVG00000000440	-	99	39.632	ENSLOCG00000005222	polrmt	60	39.632	Lepisosteus_oculatus
ENSCSAVG00000000440	-	99	42.350	ENSLAFG00000001860	POLRMT	66	42.699	Loxodonta_africana
ENSCSAVG00000000440	-	99	43.834	ENSMFAG00000031466	POLRMT	65	43.834	Macaca_fascicularis
ENSCSAVG00000000440	-	99	43.980	ENSMNEG00000039129	POLRMT	66	43.980	Macaca_nemestrina
ENSCSAVG00000000440	-	80	53.090	ENSMLEG00000037404	POLRMT	60	53.090	Mandrillus_leucophaeus
ENSCSAVG00000000440	-	95	46.144	ENSMAMG00000019284	polrmt	58	46.144	Mastacembelus_armatus
ENSCSAVG00000000440	-	99	44.010	ENSMZEG00005009932	polrmt	61	44.010	Maylandia_zebra
ENSCSAVG00000000440	-	98	45.074	ENSMGAG00000003243	POLRMT	69	44.908	Meleagris_gallopavo
ENSCSAVG00000000440	-	99	42.962	ENSMAUG00000019392	Polrmt	64	48.722	Mesocricetus_auratus
ENSCSAVG00000000440	-	99	42.157	ENSMICG00000016701	POLRMT	65	42.787	Microcebus_murinus
ENSCSAVG00000000440	-	99	41.636	ENSMOCG00000008868	Polrmt	66	41.636	Microtus_ochrogaster
ENSCSAVG00000000440	-	88	42.877	ENSMMOG00000000705	polrmt	56	42.877	Mola_mola
ENSCSAVG00000000440	-	99	44.623	ENSMODG00000006478	POLRMT	64	44.623	Monodelphis_domestica
ENSCSAVG00000000440	-	99	44.734	ENSMALG00000021224	polrmt	61	44.734	Monopterus_albus
ENSCSAVG00000000440	-	99	44.132	MGP_CAROLIEiJ_G0015538	Polrmt	100	47.344	Mus_caroli
ENSCSAVG00000000440	-	99	44.064	ENSMUSG00000020329	Polrmt	99	47.344	Mus_musculus
ENSCSAVG00000000440	-	99	43.888	MGP_PahariEiJ_G0030951	Polrmt	100	46.882	Mus_pahari
ENSCSAVG00000000440	-	99	44.064	MGP_SPRETEiJ_G0016356	Polrmt	100	47.344	Mus_spretus
ENSCSAVG00000000440	-	99	44.107	ENSMPUG00000009910	POLRMT	65	44.107	Mustela_putorius_furo
ENSCSAVG00000000440	-	99	43.050	ENSMLUG00000009223	POLRMT	65	43.050	Myotis_lucifugus
ENSCSAVG00000000440	-	99	43.681	ENSNGAG00000005498	Polrmt	64	48.808	Nannospalax_galili
ENSCSAVG00000000440	-	98	43.797	ENSNBRG00000023530	polrmt	59	43.797	Neolamprologus_brichardi
ENSCSAVG00000000440	-	99	43.227	ENSNLEG00000000718	POLRMT	65	43.227	Nomascus_leucogenys
ENSCSAVG00000000440	-	92	43.386	ENSOPRG00000013579	POLRMT	63	44.709	Ochotona_princeps
ENSCSAVG00000000440	-	99	44.294	ENSONIG00000002405	polrmt	69	44.294	Oreochromis_niloticus
ENSCSAVG00000000440	-	95	45.652	ENSORLG00000004329	polrmt	57	45.652	Oryzias_latipes
ENSCSAVG00000000440	-	95	45.385	ENSORLG00020003896	polrmt	59	45.385	Oryzias_latipes_hni
ENSCSAVG00000000440	-	95	45.524	ENSORLG00015022238	polrmt	57	45.524	Oryzias_latipes_hsok
ENSCSAVG00000000440	-	95	45.571	ENSOMEG00000008292	polrmt	60	45.571	Oryzias_melastigma
ENSCSAVG00000000440	-	99	43.735	ENSOGAG00000007912	POLRMT	65	43.788	Otolemur_garnettii
ENSCSAVG00000000440	-	99	43.415	ENSPPAG00000030853	POLRMT	64	43.415	Pan_paniscus
ENSCSAVG00000000440	-	99	42.350	ENSPPAG00000043321	-	64	42.350	Pan_paniscus
ENSCSAVG00000000440	-	82	47.570	ENSPPRG00000001547	POLRMT	58	47.570	Panthera_pardus
ENSCSAVG00000000440	-	99	43.888	ENSPTRG00000010157	POLRMT	62	43.888	Pan_troglodytes
ENSCSAVG00000000440	-	99	42.435	ENSPTRG00000039638	-	64	42.435	Pan_troglodytes
ENSCSAVG00000000440	-	99	43.941	ENSPANG00000006649	POLRMT	65	43.941	Papio_anubis
ENSCSAVG00000000440	-	99	43.735	ENSPKIG00000024580	polrmt	63	43.735	Paramormyrops_kingsleyae
ENSCSAVG00000000440	-	99	44.212	ENSPMGG00000014627	polrmt	67	44.143	Periophthalmus_magnuspinnatus
ENSCSAVG00000000440	-	99	43.995	ENSPEMG00000011671	Polrmt	64	49.519	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000440	-	81	42.342	ENSPMAG00000005070	-	75	42.342	Petromyzon_marinus
ENSCSAVG00000000440	-	99	45.043	ENSPCIG00000006103	POLRMT	67	45.043	Phascolarctos_cinereus
ENSCSAVG00000000440	-	99	45.018	ENSPFOG00000003911	polrmt	63	44.000	Poecilia_formosa
ENSCSAVG00000000440	-	83	42.815	ENSPLAG00000005743	polrmt	61	41.209	Poecilia_latipinna
ENSCSAVG00000000440	-	62	38.677	ENSPMEG00000011484	polrmt	53	38.677	Poecilia_mexicana
ENSCSAVG00000000440	-	99	44.883	ENSPMEG00000008947	polrmt	65	44.883	Poecilia_mexicana
ENSCSAVG00000000440	-	99	44.772	ENSPREG00000007650	polrmt	61	44.772	Poecilia_reticulata
ENSCSAVG00000000440	-	90	46.414	ENSPPYG00000009282	POLRMT	62	46.414	Pongo_abelii
ENSCSAVG00000000440	-	93	45.355	ENSPCAG00000010816	POLRMT	60	45.355	Procavia_capensis
ENSCSAVG00000000440	-	99	43.052	ENSPCOG00000014539	POLRMT	65	43.284	Propithecus_coquereli
ENSCSAVG00000000440	-	99	42.647	ENSPVAG00000008403	POLRMT	65	42.647	Pteropus_vampyrus
ENSCSAVG00000000440	-	99	44.034	ENSPNYG00000020790	polrmt	60	44.034	Pundamilia_nyererei
ENSCSAVG00000000440	-	99	43.346	ENSPNAG00000019790	polrmt	60	44.256	Pygocentrus_nattereri
ENSCSAVG00000000440	-	99	43.696	ENSRNOG00000024879	Polrmt	66	43.696	Rattus_norvegicus
ENSCSAVG00000000440	-	99	43.558	ENSRBIG00000006728	POLRMT	65	43.558	Rhinopithecus_bieti
ENSCSAVG00000000440	-	99	43.382	ENSRROG00000040809	POLRMT	65	43.382	Rhinopithecus_roxellana
ENSCSAVG00000000440	-	99	44.512	ENSSBOG00000025388	POLRMT	65	44.512	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000440	-	99	43.558	ENSSHAG00000009387	-	99	43.558	Sarcophilus_harrisii
ENSCSAVG00000000440	-	99	43.873	ENSSFOG00015005074	polrmt	65	43.873	Scleropages_formosus
ENSCSAVG00000000440	-	99	43.650	ENSSMAG00000011851	polrmt	60	43.650	Scophthalmus_maximus
ENSCSAVG00000000440	-	99	45.916	ENSSDUG00000004410	polrmt	64	44.913	Seriola_dumerili
ENSCSAVG00000000440	-	99	45.792	ENSSLDG00000010643	polrmt	64	44.913	Seriola_lalandi_dorsalis
ENSCSAVG00000000440	-	95	45.700	ENSSPAG00000018740	polrmt	60	45.700	Stegastes_partitus
ENSCSAVG00000000440	-	99	43.240	ENSSSCG00000035693	POLRMT	66	43.240	Sus_scrofa
ENSCSAVG00000000440	-	99	44.161	ENSTGUG00000000621	POLRMT	82	44.282	Taeniopygia_guttata
ENSCSAVG00000000440	-	99	43.052	ENSTRUG00000018040	polrmt	63	43.989	Takifugu_rubripes
ENSCSAVG00000000440	-	99	44.623	ENSTNIG00000010642	polrmt	79	44.623	Tetraodon_nigroviridis
ENSCSAVG00000000440	-	60	41.414	ENSTBEG00000001819	-	74	43.737	Tupaia_belangeri
ENSCSAVG00000000440	-	99	44.756	ENSUAMG00000019616	POLRMT	65	44.756	Ursus_americanus
ENSCSAVG00000000440	-	99	40.826	ENSVVUG00000022627	POLRMT	66	40.826	Vulpes_vulpes
ENSCSAVG00000000440	-	99	43.926	ENSXETG00000006545	polrmt	66	43.926	Xenopus_tropicalis
ENSCSAVG00000000440	-	99	44.526	ENSXMAG00000012464	polrmt	62	44.020	Xiphophorus_maculatus