EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000488 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3103 bases
Position: chrreftig_5:622854-625956
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000856	tRNA_SAD	PF07973.14	2.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000865	-	1250	-	ENSCSAVP00000000856	409 (aa)	-	H2Y6A8

Gene Model

Click here to download ENSCSAVG00000000488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000488	-	99	50.123	ENSG00000266967	AARSD1	100	57.857	Homo_sapiens
ENSCSAVG00000000488	-	96	50.000	ENSG00000108825	PTGES3L-AARSD1	79	50.000	Homo_sapiens
ENSCSAVG00000000488	-	99	53.202	ENSAPOG00000006776	aarsd1	98	53.202	Acanthochromis_polyacanthus
ENSCSAVG00000000488	-	96	50.508	ENSAMEG00000000205	-	67	50.508	Ailuropoda_melanoleuca
ENSCSAVG00000000488	-	97	56.061	ENSACIG00000001519	aarsd1	95	56.061	Amphilophus_citrinellus
ENSCSAVG00000000488	-	99	50.000	ENSAOCG00000014735	aarsd1	98	50.000	Amphiprion_ocellaris
ENSCSAVG00000000488	-	99	53.202	ENSAPEG00000004670	aarsd1	98	53.202	Amphiprion_percula
ENSCSAVG00000000488	-	99	50.614	ENSATEG00000014178	aarsd1	98	50.493	Anabas_testudineus
ENSCSAVG00000000488	-	86	53.561	ENSAPLG00000004132	-	96	53.561	Anas_platyrhynchos
ENSCSAVG00000000488	-	99	54.300	ENSACAG00000013559	-	98	54.300	Anolis_carolinensis
ENSCSAVG00000000488	-	97	49.497	ENSANAG00000028981	-	97	49.497	Aotus_nancymaae
ENSCSAVG00000000488	-	99	50.860	ENSANAG00000022313	-	98	50.860	Aotus_nancymaae
ENSCSAVG00000000488	-	97	54.798	ENSACLG00000013655	aarsd1	95	50.253	Astatotilapia_calliptera
ENSCSAVG00000000488	-	99	52.826	ENSAMXG00000031615	aarsd1	98	52.826	Astyanax_mexicanus
ENSCSAVG00000000488	-	99	46.911	ENSBTAG00000015136	AARSD1	98	46.911	Bos_taurus
ENSCSAVG00000000488	-	99	51.351	ENSCJAG00000013086	-	98	51.351	Callithrix_jacchus
ENSCSAVG00000000488	-	96	50.254	ENSCAFG00000014638	-	67	50.254	Canis_familiaris
ENSCSAVG00000000488	-	99	50.369	ENSCAFG00020013016	-	81	50.369	Canis_lupus_dingo
ENSCSAVG00000000488	-	99	50.369	ENSCHIG00000006766	-	98	50.369	Capra_hircus
ENSCSAVG00000000488	-	69	48.772	ENSTSYG00000034407	-	83	48.772	Carlito_syrichta
ENSCSAVG00000000488	-	90	47.439	ENSCAPG00000014195	-	79	47.439	Cavia_aperea
ENSCSAVG00000000488	-	99	48.894	ENSCPOG00000030193	-	98	48.894	Cavia_porcellus
ENSCSAVG00000000488	-	99	50.860	ENSCCAG00000033455	-	98	50.860	Cebus_capucinus
ENSCSAVG00000000488	-	99	50.860	ENSCATG00000023451	-	98	50.860	Cercocebus_atys
ENSCSAVG00000000488	-	99	43.584	ENSCLAG00000016486	-	98	43.584	Chinchilla_lanigera
ENSCSAVG00000000488	-	99	50.980	ENSCSAG00000003373	-	98	50.980	Chlorocebus_sabaeus
ENSCSAVG00000000488	-	96	43.655	ENSCHOG00000004531	-	75	43.655	Choloepus_hoffmanni
ENSCSAVG00000000488	-	99	51.106	ENSCPBG00000016295	-	84	51.106	Chrysemys_picta_bellii
ENSCSAVG00000000488	-	99	74.815	ENSCING00000008962	-	100	74.815	Ciona_intestinalis
ENSCSAVG00000000488	-	99	51.106	ENSCANG00000041605	-	98	51.106	Colobus_angolensis_palliatus
ENSCSAVG00000000488	-	99	50.123	ENSCGRG00001022384	-	98	50.123	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000488	-	99	50.123	ENSCGRG00000015974	-	98	50.123	Cricetulus_griseus_crigri
ENSCSAVG00000000488	-	97	54.040	ENSCSEG00000000523	aarsd1	95	54.040	Cynoglossus_semilaevis
ENSCSAVG00000000488	-	99	54.657	ENSCVAG00000018616	aarsd1	98	54.657	Cyprinodon_variegatus
ENSCSAVG00000000488	-	99	52.206	ENSDARG00000015747	aarsd1	98	52.206	Danio_rerio
ENSCSAVG00000000488	-	99	51.351	ENSDNOG00000040976	-	93	51.351	Dasypus_novemcinctus
ENSCSAVG00000000488	-	99	48.768	ENSDORG00000016028	-	98	48.768	Dipodomys_ordii
ENSCSAVG00000000488	-	96	42.680	FBgn0029664	CG10802	92	43.176	Drosophila_melanogaster
ENSCSAVG00000000488	-	96	39.086	ENSETEG00000016031	-	75	39.086	Echinops_telfairi
ENSCSAVG00000000488	-	90	46.467	ENSEBUG00000010336	aarsd1	98	46.467	Eptatretus_burgeri
ENSCSAVG00000000488	-	99	50.369	ENSEASG00005010061	-	98	50.369	Equus_asinus_asinus
ENSCSAVG00000000488	-	97	51.515	ENSECAG00000009275	-	91	51.752	Equus_caballus
ENSCSAVG00000000488	-	96	48.477	ENSEEUG00000008897	-	75	48.477	Erinaceus_europaeus
ENSCSAVG00000000488	-	97	52.778	ENSELUG00000007588	aarsd1	96	52.778	Esox_lucius
ENSCSAVG00000000488	-	99	50.614	ENSFCAG00000038399	-	58	50.614	Felis_catus
ENSCSAVG00000000488	-	85	51.714	ENSFALG00000000757	-	64	51.714	Ficedula_albicollis
ENSCSAVG00000000488	-	99	52.099	ENSFHEG00000019252	aarsd1	99	52.099	Fundulus_heteroclitus
ENSCSAVG00000000488	-	93	55.614	ENSGMOG00000013229	aarsd1	72	55.614	Gadus_morhua
ENSCSAVG00000000488	-	99	52.078	ENSGALG00000002880	AARSD1	99	52.078	Gallus_gallus
ENSCSAVG00000000488	-	99	53.695	ENSGAFG00000011085	aarsd1	97	53.695	Gambusia_affinis
ENSCSAVG00000000488	-	97	54.293	ENSGACG00000009815	aarsd1	96	54.293	Gasterosteus_aculeatus
ENSCSAVG00000000488	-	99	51.351	ENSGAGG00000008103	-	98	51.351	Gopherus_agassizii
ENSCSAVG00000000488	-	99	50.123	ENSGGOG00000006250	PTGES3L-AARSD1	98	50.123	Gorilla_gorilla
ENSCSAVG00000000488	-	97	54.798	ENSHBUG00000022391	aarsd1	95	54.798	Haplochromis_burtoni
ENSCSAVG00000000488	-	99	49.261	ENSHGLG00000010802	-	96	49.261	Heterocephalus_glaber_female
ENSCSAVG00000000488	-	84	48.397	ENSHGLG00100000638	-	95	48.397	Heterocephalus_glaber_male
ENSCSAVG00000000488	-	97	53.030	ENSHCOG00000013491	aarsd1	95	53.030	Hippocampus_comes
ENSCSAVG00000000488	-	99	51.724	ENSIPUG00000010672	aarsd1	98	51.724	Ictalurus_punctatus
ENSCSAVG00000000488	-	91	43.011	ENSSTOG00000029510	-	91	43.243	Ictidomys_tridecemlineatus
ENSCSAVG00000000488	-	99	49.631	ENSSTOG00000000481	-	98	49.631	Ictidomys_tridecemlineatus
ENSCSAVG00000000488	-	99	51.351	ENSJJAG00000011149	-	98	51.351	Jaculus_jaculus
ENSCSAVG00000000488	-	99	53.695	ENSKMAG00000009612	aarsd1	98	53.695	Kryptolebias_marmoratus
ENSCSAVG00000000488	-	99	53.676	ENSLBEG00000008445	aarsd1	98	53.676	Labrus_bergylta
ENSCSAVG00000000488	-	99	51.716	ENSLACG00000006926	aarsd1	98	51.716	Latimeria_chalumnae
ENSCSAVG00000000488	-	97	53.030	ENSLOCG00000012212	aarsd1	98	52.206	Lepisosteus_oculatus
ENSCSAVG00000000488	-	99	50.123	ENSLAFG00000003022	-	98	50.123	Loxodonta_africana
ENSCSAVG00000000488	-	99	51.106	ENSMFAG00000034389	-	98	51.106	Macaca_fascicularis
ENSCSAVG00000000488	-	99	51.106	ENSMMUG00000014123	-	98	51.106	Macaca_mulatta
ENSCSAVG00000000488	-	99	51.351	ENSMNEG00000037015	-	98	51.351	Macaca_nemestrina
ENSCSAVG00000000488	-	99	51.351	ENSMLEG00000038627	-	98	51.351	Mandrillus_leucophaeus
ENSCSAVG00000000488	-	99	54.187	ENSMAMG00000007918	aarsd1	98	54.187	Mastacembelus_armatus
ENSCSAVG00000000488	-	97	53.885	ENSMZEG00005009412	aarsd1	95	53.885	Maylandia_zebra
ENSCSAVG00000000488	-	75	47.883	ENSMGAG00000004245	-	57	47.883	Meleagris_gallopavo
ENSCSAVG00000000488	-	99	50.985	ENSMAUG00000022119	-	98	50.985	Mesocricetus_auratus
ENSCSAVG00000000488	-	99	44.226	ENSMICG00000014185	-	98	44.226	Microcebus_murinus
ENSCSAVG00000000488	-	99	50.369	ENSMOCG00000008732	-	98	50.369	Microtus_ochrogaster
ENSCSAVG00000000488	-	100	50.732	ENSMMOG00000002681	aarsd1	99	50.732	Mola_mola
ENSCSAVG00000000488	-	99	49.024	ENSMODG00000015109	-	59	49.024	Monodelphis_domestica
ENSCSAVG00000000488	-	97	55.303	ENSMALG00000004123	aarsd1	95	55.303	Monopterus_albus
ENSCSAVG00000000488	-	96	51.015	MGP_CAROLIEiJ_G0017215	Gm27029	75	51.015	Mus_caroli
ENSCSAVG00000000488	-	99	51.106	MGP_CAROLIEiJ_G0017216	Aarsd1	98	51.106	Mus_caroli
ENSCSAVG00000000488	-	96	50.761	ENSMUSG00000097239	Gm27029	75	50.761	Mus_musculus
ENSCSAVG00000000488	-	99	50.860	ENSMUSG00000075528	Aarsd1	98	50.860	Mus_musculus
ENSCSAVG00000000488	-	96	50.761	MGP_PahariEiJ_G0018345	-	75	50.761	Mus_pahari
ENSCSAVG00000000488	-	99	50.860	MGP_PahariEiJ_G0018346	-	98	50.860	Mus_pahari
ENSCSAVG00000000488	-	99	51.351	MGP_SPRETEiJ_G0018059	Aarsd1	98	51.351	Mus_spretus
ENSCSAVG00000000488	-	96	51.269	MGP_SPRETEiJ_G0018058	Gm27029	75	51.269	Mus_spretus
ENSCSAVG00000000488	-	99	51.351	ENSMPUG00000009956	-	90	51.351	Mustela_putorius_furo
ENSCSAVG00000000488	-	96	50.382	ENSMLUG00000024369	-	96	50.000	Myotis_lucifugus
ENSCSAVG00000000488	-	99	50.369	ENSNGAG00000010786	-	98	50.369	Nannospalax_galili
ENSCSAVG00000000488	-	97	52.778	ENSNBRG00000021624	aarsd1	95	52.778	Neolamprologus_brichardi
ENSCSAVG00000000488	-	99	50.614	ENSNLEG00000011890	-	98	50.614	Nomascus_leucogenys
ENSCSAVG00000000488	-	85	42.571	ENSMEUG00000010450	-	66	42.571	Notamacropus_eugenii
ENSCSAVG00000000488	-	96	50.254	ENSOPRG00000012708	-	75	50.254	Ochotona_princeps
ENSCSAVG00000000488	-	99	48.030	ENSODEG00000018082	-	98	48.030	Octodon_degus
ENSCSAVG00000000488	-	97	54.798	ENSONIG00000019893	aarsd1	95	54.798	Oreochromis_niloticus
ENSCSAVG00000000488	-	67	37.662	ENSOANG00000013149	-	93	37.662	Ornithorhynchus_anatinus
ENSCSAVG00000000488	-	99	50.860	ENSOCUG00000009259	-	98	50.860	Oryctolagus_cuniculus
ENSCSAVG00000000488	-	99	53.218	ENSORLG00000022752	aarsd1	97	53.218	Oryzias_latipes
ENSCSAVG00000000488	-	99	53.218	ENSORLG00020021477	aarsd1	97	53.218	Oryzias_latipes_hni
ENSCSAVG00000000488	-	99	53.218	ENSORLG00015019664	aarsd1	97	53.218	Oryzias_latipes_hsok
ENSCSAVG00000000488	-	80	55.263	ENSOMEG00000000122	aarsd1	87	55.263	Oryzias_melastigma
ENSCSAVG00000000488	-	99	50.860	ENSOGAG00000003934	-	98	50.860	Otolemur_garnettii
ENSCSAVG00000000488	-	99	50.123	ENSOARG00000004172	-	98	50.123	Ovis_aries
ENSCSAVG00000000488	-	99	50.369	ENSPPAG00000032539	-	98	50.369	Pan_paniscus
ENSCSAVG00000000488	-	99	50.614	ENSPPRG00000013962	-	98	50.614	Panthera_pardus
ENSCSAVG00000000488	-	96	50.380	ENSPTIG00000012989	-	75	50.380	Panthera_tigris_altaica
ENSCSAVG00000000488	-	99	50.369	ENSPTRG00000009230	-	98	50.369	Pan_troglodytes
ENSCSAVG00000000488	-	99	51.597	ENSPANG00000021379	-	98	51.597	Papio_anubis
ENSCSAVG00000000488	-	97	53.283	ENSPKIG00000001834	aarsd1	96	53.283	Paramormyrops_kingsleyae
ENSCSAVG00000000488	-	65	54.104	ENSPSIG00000004931	-	96	54.104	Pelodiscus_sinensis
ENSCSAVG00000000488	-	54	54.751	ENSPMGG00000004258	aarsd1	92	54.751	Periophthalmus_magnuspinnatus
ENSCSAVG00000000488	-	99	50.739	ENSPEMG00000018495	-	98	50.739	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000488	-	99	55.283	ENSPMAG00000002529	aarsd1	98	55.283	Petromyzon_marinus
ENSCSAVG00000000488	-	99	48.900	ENSPCIG00000021490	-	98	48.900	Phascolarctos_cinereus
ENSCSAVG00000000488	-	99	54.950	ENSPFOG00000014083	aarsd1	97	54.950	Poecilia_formosa
ENSCSAVG00000000488	-	99	54.950	ENSPLAG00000023398	aarsd1	97	54.950	Poecilia_latipinna
ENSCSAVG00000000488	-	99	52.709	ENSPMEG00000005191	aarsd1	97	52.709	Poecilia_mexicana
ENSCSAVG00000000488	-	99	54.950	ENSPREG00000004827	aarsd1	97	54.950	Poecilia_reticulata
ENSCSAVG00000000488	-	64	48.473	ENSPPYG00000029909	-	97	48.473	Pongo_abelii
ENSCSAVG00000000488	-	87	51.124	ENSPCAG00000013129	-	74	51.124	Procavia_capensis
ENSCSAVG00000000488	-	99	50.369	ENSPCOG00000014853	-	98	50.369	Propithecus_coquereli
ENSCSAVG00000000488	-	96	47.208	ENSPVAG00000008812	-	75	47.208	Pteropus_vampyrus
ENSCSAVG00000000488	-	97	53.885	ENSPNYG00000019048	aarsd1	95	53.885	Pundamilia_nyererei
ENSCSAVG00000000488	-	99	51.232	ENSPNAG00000000407	aarsd1	98	51.232	Pygocentrus_nattereri
ENSCSAVG00000000488	-	99	49.386	ENSRNOG00000020658	Aarsd1	98	49.386	Rattus_norvegicus
ENSCSAVG00000000488	-	99	50.614	ENSRBIG00000040598	-	94	50.614	Rhinopithecus_bieti
ENSCSAVG00000000488	-	99	50.860	ENSRROG00000030505	-	98	50.860	Rhinopithecus_roxellana
ENSCSAVG00000000488	-	90	52.162	ENSSBOG00000025962	-	100	52.162	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000488	-	99	49.878	ENSSHAG00000012128	-	98	49.878	Sarcophilus_harrisii
ENSCSAVG00000000488	-	98	50.620	ENSSFOG00015008880	aarsd1	98	50.620	Scleropages_formosus
ENSCSAVG00000000488	-	97	55.303	ENSSMAG00000011081	aarsd1	95	55.303	Scophthalmus_maximus
ENSCSAVG00000000488	-	97	56.061	ENSSDUG00000003913	aarsd1	96	56.061	Seriola_dumerili
ENSCSAVG00000000488	-	97	55.556	ENSSLDG00000001645	aarsd1	95	55.556	Seriola_lalandi_dorsalis
ENSCSAVG00000000488	-	99	51.582	ENSSPUG00000004592	-	98	51.582	Sphenodon_punctatus
ENSCSAVG00000000488	-	99	53.202	ENSSPAG00000018029	aarsd1	98	53.202	Stegastes_partitus
ENSCSAVG00000000488	-	99	50.860	ENSSSCG00000037979	-	97	52.553	Sus_scrofa
ENSCSAVG00000000488	-	96	52.405	ENSTGUG00000002837	-	98	52.405	Taeniopygia_guttata
ENSCSAVG00000000488	-	97	51.515	ENSTRUG00000016572	aarsd1	94	53.846	Takifugu_rubripes
ENSCSAVG00000000488	-	94	51.554	ENSTNIG00000012859	aarsd1	73	51.554	Tetraodon_nigroviridis
ENSCSAVG00000000488	-	67	41.877	ENSTBEG00000001124	-	97	41.877	Tupaia_belangeri
ENSCSAVG00000000488	-	96	50.508	ENSTTRG00000011737	-	80	50.508	Tursiops_truncatus
ENSCSAVG00000000488	-	99	50.369	ENSUAMG00000013129	-	98	50.369	Ursus_americanus
ENSCSAVG00000000488	-	99	50.369	ENSUMAG00000025067	-	98	50.369	Ursus_maritimus
ENSCSAVG00000000488	-	79	55.102	ENSVPAG00000002571	-	62	55.102	Vicugna_pacos
ENSCSAVG00000000488	-	99	50.369	ENSVVUG00000023939	-	98	50.369	Vulpes_vulpes
ENSCSAVG00000000488	-	100	47.748	ENSXETG00000013644	aarsd1	95	57.014	Xenopus_tropicalis
ENSCSAVG00000000488	-	99	52.323	ENSXCOG00000017893	aarsd1	98	52.323	Xiphophorus_couchianus
ENSCSAVG00000000488	-	99	53.695	ENSXMAG00000016266	aarsd1	98	53.695	Xiphophorus_maculatus