EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000000504 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3374 bases
Position: chrreftig_209:113916-117289
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000888	MMR_HSR1	PF01926.23	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000897	-	866	-	ENSCSAVP00000000888	183 (aa)	-	H2Y6E0

Gene Model

Click here to download ENSCSAVG00000000504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000000504	-	89	47.590	ENSCSAVG00000001959	-	91	47.590
ENSCSAVG00000000504	-	96	55.367	ENSCSAVG00000008290	-	93	55.367
ENSCSAVG00000000504	-	81	34.000	ENSCSAVG00000008336	-	87	34.000
ENSCSAVG00000000504	-	86	50.625	ENSCSAVG00000000059	-	90	50.625
ENSCSAVG00000000504	-	96	37.838	ENSCSAVG00000000015	-	97	37.838
ENSCSAVG00000000504	-	94	34.615	ENSCSAVG00000010686	-	78	34.615
ENSCSAVG00000000504	-	90	47.904	ENSCSAVG00000007620	-	90	47.904
ENSCSAVG00000000504	-	86	50.000	ENSCSAVG00000007010	-	88	50.000
ENSCSAVG00000000504	-	90	51.807	ENSCSAVG00000007011	-	91	51.807

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000504	-	100	79.891	ENSG00000213465	ARL2	100	79.891	Homo_sapiens
ENSCSAVG00000000504	-	100	77.717	ENSAPOG00000008867	arl2	100	77.717	Acanthochromis_polyacanthus
ENSCSAVG00000000504	-	100	77.368	ENSAMEG00000017738	-	100	77.368	Ailuropoda_melanoleuca
ENSCSAVG00000000504	-	100	78.804	ENSACIG00000000612	arl2	100	78.804	Amphilophus_citrinellus
ENSCSAVG00000000504	-	100	78.261	ENSAOCG00000004724	arl2	100	78.261	Amphiprion_ocellaris
ENSCSAVG00000000504	-	100	78.261	ENSAPEG00000020786	arl2	100	78.261	Amphiprion_percula
ENSCSAVG00000000504	-	100	78.261	ENSATEG00000016272	arl2	100	78.261	Anabas_testudineus
ENSCSAVG00000000504	-	99	78.571	ENSANAG00000033806	-	99	78.571	Aotus_nancymaae
ENSCSAVG00000000504	-	100	77.717	ENSACLG00000021338	arl2	100	77.717	Astatotilapia_calliptera
ENSCSAVG00000000504	-	100	77.174	ENSAMXG00000011499	arl2	100	77.174	Astyanax_mexicanus
ENSCSAVG00000000504	-	100	79.348	ENSBTAG00000002238	ARL2	100	79.348	Bos_taurus
ENSCSAVG00000000504	-	100	61.413	WBGene00001358	evl-20	100	61.413	Caenorhabditis_elegans
ENSCSAVG00000000504	-	99	79.670	ENSCJAG00000044597	-	99	79.670	Callithrix_jacchus
ENSCSAVG00000000504	-	62	86.842	ENSCAFG00000028760	ARL2-SNX15	75	86.842	Canis_familiaris
ENSCSAVG00000000504	-	100	79.891	ENSCAFG00020014890	-	100	79.891	Canis_lupus_dingo
ENSCSAVG00000000504	-	100	79.348	ENSCHIG00000021231	ARL2-SNX15	100	79.348	Capra_hircus
ENSCSAVG00000000504	-	100	75.543	ENSTSYG00000026739	-	100	75.543	Carlito_syrichta
ENSCSAVG00000000504	-	88	78.395	ENSCAPG00000005961	-	95	78.395	Cavia_aperea
ENSCSAVG00000000504	-	100	79.348	ENSCPOG00000025520	-	100	79.348	Cavia_porcellus
ENSCSAVG00000000504	-	99	79.121	ENSCCAG00000037394	-	99	79.121	Cebus_capucinus
ENSCSAVG00000000504	-	100	79.891	ENSCATG00000028839	ARL2	100	79.891	Cercocebus_atys
ENSCSAVG00000000504	-	99	79.121	ENSCLAG00000017139	-	99	79.121	Chinchilla_lanigera
ENSCSAVG00000000504	-	100	79.891	ENSCSAG00000007569	ARL2	100	79.891	Chlorocebus_sabaeus
ENSCSAVG00000000504	-	100	78.804	ENSCPBG00000023664	-	84	78.804	Chrysemys_picta_bellii
ENSCSAVG00000000504	-	100	92.935	ENSCING00000018325	-	100	92.935	Ciona_intestinalis
ENSCSAVG00000000504	-	100	79.891	ENSCANG00000043669	ARL2	100	79.891	Colobus_angolensis_palliatus
ENSCSAVG00000000504	-	100	78.804	ENSCGRG00001006206	Arl2	100	78.804	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000504	-	100	75.000	ENSCGRG00000000544	Arl2	100	75.000	Cricetulus_griseus_crigri
ENSCSAVG00000000504	-	100	77.717	ENSCSEG00000016811	arl2	100	77.717	Cynoglossus_semilaevis
ENSCSAVG00000000504	-	100	76.087	ENSCVAG00000008445	arl2	100	76.087	Cyprinodon_variegatus
ENSCSAVG00000000504	-	100	77.717	ENSDARG00000069496	arl2	100	77.717	Danio_rerio
ENSCSAVG00000000504	-	100	78.804	ENSDNOG00000025275	-	100	78.804	Dasypus_novemcinctus
ENSCSAVG00000000504	-	100	79.348	ENSDORG00000004251	Arl2	100	79.348	Dipodomys_ordii
ENSCSAVG00000000504	-	100	72.283	FBgn0004908	Arl2	100	72.283	Drosophila_melanogaster
ENSCSAVG00000000504	-	99	77.473	ENSEBUG00000014954	arl2	81	77.473	Eptatretus_burgeri
ENSCSAVG00000000504	-	100	79.891	ENSEASG00005018231	-	100	79.891	Equus_asinus_asinus
ENSCSAVG00000000504	-	100	79.891	ENSECAG00000018075	-	100	79.891	Equus_caballus
ENSCSAVG00000000504	-	100	76.630	ENSELUG00000016704	arl2	100	76.630	Esox_lucius
ENSCSAVG00000000504	-	100	79.348	ENSFCAG00000038054	-	100	79.348	Felis_catus
ENSCSAVG00000000504	-	100	79.891	ENSFDAG00000009197	-	100	79.891	Fukomys_damarensis
ENSCSAVG00000000504	-	79	81.379	ENSFHEG00000005294	arl2	84	81.379	Fundulus_heteroclitus
ENSCSAVG00000000504	-	100	77.174	ENSGMOG00000011008	arl2	100	77.174	Gadus_morhua
ENSCSAVG00000000504	-	99	79.670	ENSGAFG00000015025	arl2	99	79.670	Gambusia_affinis
ENSCSAVG00000000504	-	100	78.261	ENSGACG00000019812	arl2	100	78.261	Gasterosteus_aculeatus
ENSCSAVG00000000504	-	100	78.804	ENSGAGG00000014554	-	84	78.804	Gopherus_agassizii
ENSCSAVG00000000504	-	100	79.891	ENSGGOG00000005254	ARL2	100	79.891	Gorilla_gorilla
ENSCSAVG00000000504	-	100	79.891	ENSHGLG00000010538	ARL2	100	79.891	Heterocephalus_glaber_female
ENSCSAVG00000000504	-	100	79.891	ENSHGLG00100013152	ARL2	100	79.891	Heterocephalus_glaber_male
ENSCSAVG00000000504	-	100	63.959	ENSHCOG00000009949	arl2	100	63.959	Hippocampus_comes
ENSCSAVG00000000504	-	100	78.261	ENSIPUG00000003931	arl2	100	78.261	Ictalurus_punctatus
ENSCSAVG00000000504	-	100	79.348	ENSSTOG00000025524	ARL2	100	79.348	Ictidomys_tridecemlineatus
ENSCSAVG00000000504	-	100	78.804	ENSJJAG00000020533	Arl2	100	78.804	Jaculus_jaculus
ENSCSAVG00000000504	-	100	77.174	ENSKMAG00000007118	arl2	100	77.174	Kryptolebias_marmoratus
ENSCSAVG00000000504	-	100	78.804	ENSLBEG00000016494	arl2	100	78.804	Labrus_bergylta
ENSCSAVG00000000504	-	100	64.062	ENSLACG00000003946	arl2	100	64.062	Latimeria_chalumnae
ENSCSAVG00000000504	-	100	75.543	ENSLOCG00000002173	arl2	100	77.174	Lepisosteus_oculatus
ENSCSAVG00000000504	-	100	78.804	ENSLAFG00000020731	-	100	78.804	Loxodonta_africana
ENSCSAVG00000000504	-	100	79.891	ENSMFAG00000041098	ARL2	100	79.891	Macaca_fascicularis
ENSCSAVG00000000504	-	100	79.891	ENSMMUG00000041388	ARL2	100	79.891	Macaca_mulatta
ENSCSAVG00000000504	-	100	79.891	ENSMNEG00000001420	-	100	69.945	Macaca_nemestrina
ENSCSAVG00000000504	-	100	79.235	ENSMLEG00000044379	ARL2	100	79.235	Mandrillus_leucophaeus
ENSCSAVG00000000504	-	100	78.804	ENSMAMG00000008610	arl2	100	78.804	Mastacembelus_armatus
ENSCSAVG00000000504	-	100	77.717	ENSMZEG00005003346	arl2	100	77.717	Maylandia_zebra
ENSCSAVG00000000504	-	100	78.804	ENSMAUG00000014431	Arl2	100	78.804	Mesocricetus_auratus
ENSCSAVG00000000504	-	100	79.891	ENSMICG00000038050	ARL2	100	79.891	Microcebus_murinus
ENSCSAVG00000000504	-	100	78.804	ENSMOCG00000019685	Arl2	100	78.804	Microtus_ochrogaster
ENSCSAVG00000000504	-	100	64.481	ENSMMOG00000014212	arl2	100	66.667	Mola_mola
ENSCSAVG00000000504	-	99	80.220	ENSMODG00000010200	-	99	80.220	Monodelphis_domestica
ENSCSAVG00000000504	-	100	77.717	ENSMALG00000018749	arl2	100	77.717	Monopterus_albus
ENSCSAVG00000000504	-	100	77.717	MGP_CAROLIEiJ_G0022597	Arl2	100	77.717	Mus_caroli
ENSCSAVG00000000504	-	100	77.717	ENSMUSG00000024944	Arl2	100	77.717	Mus_musculus
ENSCSAVG00000000504	-	100	77.717	MGP_PahariEiJ_G0014091	Arl2	100	77.717	Mus_pahari
ENSCSAVG00000000504	-	100	77.717	MGP_SPRETEiJ_G0023508	Arl2	100	77.717	Mus_spretus
ENSCSAVG00000000504	-	100	79.348	ENSMPUG00000012469	-	100	79.348	Mustela_putorius_furo
ENSCSAVG00000000504	-	100	79.891	ENSMLUG00000024082	-	100	79.891	Myotis_lucifugus
ENSCSAVG00000000504	-	100	79.348	ENSNGAG00000019483	Arl2	100	79.348	Nannospalax_galili
ENSCSAVG00000000504	-	88	76.543	ENSNBRG00000006393	arl2	97	76.543	Neolamprologus_brichardi
ENSCSAVG00000000504	-	100	79.891	ENSNLEG00000005437	ARL2	100	79.891	Nomascus_leucogenys
ENSCSAVG00000000504	-	99	80.769	ENSMEUG00000011586	-	99	80.769	Notamacropus_eugenii
ENSCSAVG00000000504	-	100	69.565	ENSOPRG00000019180	-	100	69.565	Ochotona_princeps
ENSCSAVG00000000504	-	99	78.571	ENSODEG00000019069	-	99	78.571	Octodon_degus
ENSCSAVG00000000504	-	99	67.582	ENSODEG00000008664	-	99	67.582	Octodon_degus
ENSCSAVG00000000504	-	84	79.870	ENSODEG00000014792	ARL2-SNX15	85	79.870	Octodon_degus
ENSCSAVG00000000504	-	99	77.473	ENSODEG00000019246	-	99	77.473	Octodon_degus
ENSCSAVG00000000504	-	100	77.717	ENSONIG00000013539	arl2	100	77.717	Oreochromis_niloticus
ENSCSAVG00000000504	-	100	59.459	ENSOANG00000020861	-	100	59.459	Ornithorhynchus_anatinus
ENSCSAVG00000000504	-	100	74.457	ENSORLG00000005571	arl2	100	76.087	Oryzias_latipes
ENSCSAVG00000000504	-	100	65.027	ENSORLG00020012167	arl2	100	66.667	Oryzias_latipes_hni
ENSCSAVG00000000504	-	100	74.457	ENSORLG00015010044	arl2	100	76.087	Oryzias_latipes_hsok
ENSCSAVG00000000504	-	100	75.000	ENSOMEG00000008521	arl2	100	76.630	Oryzias_melastigma
ENSCSAVG00000000504	-	100	79.891	ENSOGAG00000034816	-	100	79.891	Otolemur_garnettii
ENSCSAVG00000000504	-	100	79.348	ENSOARG00000011395	ARL2	100	79.348	Ovis_aries
ENSCSAVG00000000504	-	100	79.891	ENSPPAG00000041696	ARL2	100	79.891	Pan_paniscus
ENSCSAVG00000000504	-	100	79.348	ENSPPRG00000003016	-	100	79.348	Panthera_pardus
ENSCSAVG00000000504	-	81	80.667	ENSPTIG00000015160	ARL2-SNX15	81	80.667	Panthera_tigris_altaica
ENSCSAVG00000000504	-	100	79.891	ENSPTRG00000034478	ARL2	100	79.891	Pan_troglodytes
ENSCSAVG00000000504	-	100	79.891	ENSPANG00000012184	ARL2	100	69.945	Papio_anubis
ENSCSAVG00000000504	-	100	78.804	ENSPKIG00000024946	arl2	100	78.804	Paramormyrops_kingsleyae
ENSCSAVG00000000504	-	100	78.261	ENSPSIG00000014976	-	90	78.261	Pelodiscus_sinensis
ENSCSAVG00000000504	-	100	64.481	ENSPMGG00000004810	arl2	100	66.667	Periophthalmus_magnuspinnatus
ENSCSAVG00000000504	-	100	78.804	ENSPEMG00000007265	Arl2	100	78.804	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000504	-	99	82.967	ENSPMAG00000004724	arl2	99	82.967	Petromyzon_marinus
ENSCSAVG00000000504	-	99	80.220	ENSPCIG00000007748	-	99	80.220	Phascolarctos_cinereus
ENSCSAVG00000000504	-	99	79.121	ENSPFOG00000001643	arl2	99	79.121	Poecilia_formosa
ENSCSAVG00000000504	-	99	79.670	ENSPLAG00000012381	arl2	99	79.670	Poecilia_latipinna
ENSCSAVG00000000504	-	99	79.670	ENSPMEG00000009877	arl2	99	79.670	Poecilia_mexicana
ENSCSAVG00000000504	-	99	79.670	ENSPREG00000020490	arl2	99	79.670	Poecilia_reticulata
ENSCSAVG00000000504	-	100	79.891	ENSPCOG00000021131	ARL2	100	79.891	Propithecus_coquereli
ENSCSAVG00000000504	-	100	80.435	ENSPVAG00000007899	-	100	80.435	Pteropus_vampyrus
ENSCSAVG00000000504	-	100	76.630	ENSPNYG00000018550	arl2	100	76.630	Pundamilia_nyererei
ENSCSAVG00000000504	-	100	77.174	ENSPNAG00000019262	arl2	100	77.174	Pygocentrus_nattereri
ENSCSAVG00000000504	-	95	76.571	ENSRNOG00000021010	Arl2	100	76.571	Rattus_norvegicus
ENSCSAVG00000000504	-	93	70.349	ENSRBIG00000006738	-	94	70.349	Rhinopithecus_bieti
ENSCSAVG00000000504	-	100	79.348	ENSRBIG00000041751	-	100	69.399	Rhinopithecus_bieti
ENSCSAVG00000000504	-	96	76.836	ENSRROG00000008815	-	97	76.836	Rhinopithecus_roxellana
ENSCSAVG00000000504	-	100	79.891	ENSRROG00000015825	-	100	79.891	Rhinopithecus_roxellana
ENSCSAVG00000000504	-	95	35.676	YMR138W	CIN4	95	35.676	Saccharomyces_cerevisiae
ENSCSAVG00000000504	-	99	79.121	ENSSBOG00000016897	ARL2-SNX15	99	79.121	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000504	-	99	80.220	ENSSHAG00000003390	-	99	80.220	Sarcophilus_harrisii
ENSCSAVG00000000504	-	100	65.027	ENSSFOG00015008219	arl2	100	67.213	Scleropages_formosus
ENSCSAVG00000000504	-	100	75.543	ENSSMAG00000017643	arl2	100	75.543	Scophthalmus_maximus
ENSCSAVG00000000504	-	100	78.261	ENSSDUG00000021397	arl2	100	78.261	Seriola_dumerili
ENSCSAVG00000000504	-	100	78.261	ENSSLDG00000000124	arl2	100	78.261	Seriola_lalandi_dorsalis
ENSCSAVG00000000504	-	100	78.261	ENSSPUG00000002850	-	100	78.261	Sphenodon_punctatus
ENSCSAVG00000000504	-	100	78.261	ENSSPAG00000017321	arl2	100	78.261	Stegastes_partitus
ENSCSAVG00000000504	-	100	79.348	ENSSSCG00000034387	ARL2-SNX15	87	79.348	Sus_scrofa
ENSCSAVG00000000504	-	99	77.473	ENSTRUG00000005435	arl2	99	77.473	Takifugu_rubripes
ENSCSAVG00000000504	-	99	78.022	ENSTNIG00000013830	arl2	99	78.022	Tetraodon_nigroviridis
ENSCSAVG00000000504	-	100	79.891	ENSUAMG00000012246	-	100	79.891	Ursus_americanus
ENSCSAVG00000000504	-	98	72.973	ENSUMAG00000007990	-	98	72.973	Ursus_maritimus
ENSCSAVG00000000504	-	100	79.891	ENSVVUG00000027528	-	100	79.891	Vulpes_vulpes
ENSCSAVG00000000504	-	100	82.065	ENSXETG00000001661	arl2	100	82.065	Xenopus_tropicalis
ENSCSAVG00000000504	-	99	78.571	ENSXCOG00000006377	arl2	99	78.571	Xiphophorus_couchianus
ENSCSAVG00000000504	-	99	78.022	ENSXMAG00000017060	arl2	99	78.022	Xiphophorus_maculatus