EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000000520 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 6671 bases
Position: chrreftig_344:97115-103785
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000920	zf-C2H2	PF00096.26	1.4e-30	1	4
ENSCSAVP00000000920	zf-C2H2	PF00096.26	1.4e-30	2	4
ENSCSAVP00000000920	zf-C2H2	PF00096.26	1.4e-30	3	4
ENSCSAVP00000000920	zf-C2H2	PF00096.26	1.4e-30	4	4
ENSCSAVP00000000920	zf-met	PF12874.7	1.5e-11	1	2
ENSCSAVP00000000920	zf-met	PF12874.7	1.5e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000930	-	762	-	ENSCSAVP00000000920	254 (aa)	-	H2Y6H2

Gene Model

Click here to download ENSCSAVG00000000520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000000520	-	100	66.207	ENSCSAVG00000008862	-	100	70.370
ENSCSAVG00000000520	-	100	53.226	ENSCSAVG00000004762	-	100	50.000
ENSCSAVG00000000520	-	100	63.866	ENSCSAVG00000004499	-	100	57.895
ENSCSAVG00000000520	-	100	38.710	ENSCSAVG00000009819	-	72	38.710
ENSCSAVG00000000520	-	100	65.254	ENSCSAVG00000004703	-	100	63.043
ENSCSAVG00000000520	-	99	41.975	ENSCSAVG00000011749	-	77	41.975
ENSCSAVG00000000520	-	100	57.143	ENSCSAVG00000009583	-	100	57.143
ENSCSAVG00000000520	-	100	42.647	ENSCSAVG00000006650	-	100	41.420
ENSCSAVG00000000520	-	100	47.059	ENSCSAVG00000007589	-	100	47.200
ENSCSAVG00000000520	-	98	67.722	ENSCSAVG00000000642	-	99	71.329
ENSCSAVG00000000520	-	100	56.855	ENSCSAVG00000000649	-	99	56.855
ENSCSAVG00000000520	-	100	59.259	ENSCSAVG00000010960	-	100	59.259
ENSCSAVG00000000520	-	94	38.462	ENSCSAVG00000009739	-	55	38.462
ENSCSAVG00000000520	-	100	40.876	ENSCSAVG00000005904	-	100	40.876
ENSCSAVG00000000520	-	100	62.195	ENSCSAVG00000003690	-	100	62.195
ENSCSAVG00000000520	-	100	66.129	ENSCSAVG00000001834	-	100	62.205
ENSCSAVG00000000520	-	100	72.222	ENSCSAVG00000001830	-	100	72.222
ENSCSAVG00000000520	-	100	47.656	ENSCSAVG00000004678	-	99	47.656
ENSCSAVG00000000520	-	100	79.221	ENSCSAVG00000001989	-	100	79.221
ENSCSAVG00000000520	-	100	62.205	ENSCSAVG00000007918	-	100	62.205
ENSCSAVG00000000520	-	100	46.250	ENSCSAVG00000004543	-	99	36.364
ENSCSAVG00000000520	-	99	49.091	ENSCSAVG00000003895	-	100	49.091
ENSCSAVG00000000520	-	100	57.534	ENSCSAVG00000006608	-	100	57.534
ENSCSAVG00000000520	-	100	59.375	ENSCSAVG00000000293	-	99	59.375
ENSCSAVG00000000520	-	100	47.458	ENSCSAVG00000009574	-	99	47.458
ENSCSAVG00000000520	-	100	41.304	ENSCSAVG00000001949	-	96	41.304
ENSCSAVG00000000520	-	100	67.407	ENSCSAVG00000000673	-	99	64.800
ENSCSAVG00000000520	-	100	43.678	ENSCSAVG00000011146	-	82	43.678
ENSCSAVG00000000520	-	100	67.000	ENSCSAVG00000000655	-	98	67.000
ENSCSAVG00000000520	-	100	33.577	ENSCSAVG00000006729	-	68	33.065
ENSCSAVG00000000520	-	100	49.650	ENSCSAVG00000010156	-	97	49.650
ENSCSAVG00000000520	-	100	41.111	ENSCSAVG00000006028	-	57	41.111
ENSCSAVG00000000520	-	100	55.039	ENSCSAVG00000006141	-	100	51.969
ENSCSAVG00000000520	-	100	53.498	ENSCSAVG00000001808	-	100	53.498
ENSCSAVG00000000520	-	96	33.796	ENSCSAVG00000009217	-	99	33.796
ENSCSAVG00000000520	-	100	35.268	ENSCSAVG00000006745	-	98	34.722
ENSCSAVG00000000520	-	100	58.233	ENSCSAVG00000009953	-	99	58.233
ENSCSAVG00000000520	-	100	33.478	ENSCSAVG00000005896	-	68	33.478
ENSCSAVG00000000520	-	100	53.448	ENSCSAVG00000002179	-	99	53.448
ENSCSAVG00000000520	-	100	64.964	ENSCSAVG00000000690	-	100	64.964

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000520	-	83	46.281	ENSACIG00000018059	-	56	46.281	Amphilophus_citrinellus
ENSCSAVG00000000520	-	100	45.982	ENSEBUG00000001698	-	95	45.982	Eptatretus_burgeri