EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000000521 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
16236 bases
Position
chrreftig_344:143370-159605
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000000921tRNA-synt_1gPF09334.111.8e-1411
ENSCSAVP00000000926tRNA-synt_1gPF09334.112.5e-1411
ENSCSAVP00000000923tRNA-synt_1gPF09334.112.6e-1411
ENSCSAVP00000000927tRNA-synt_1gPF09334.114.5e-1411
ENSCSAVP00000000922tRNA-synt_1gPF09334.119.4e-1411
ENSCSAVP00000000925tRNA-synt_1gPF09334.111.1e-1311
ENSCSAVP00000000924tRNA-synt_1gPF09334.111.5e-1311
ENSCSAVP00000000924Anticodon_1PF08264.131.4e-2311
ENSCSAVP00000000927Anticodon_1PF08264.131.3e-2111
ENSCSAVP00000000925Anticodon_1PF08264.132.8e-2111
ENSCSAVP00000000921Anticodon_1PF08264.131.5e-2011
ENSCSAVP00000000923Anticodon_1PF08264.132.1e-2011
ENSCSAVP00000000922Anticodon_1PF08264.132.5e-2011
ENSCSAVP00000000926Anticodon_1PF08264.133.9e-2011
ENSCSAVP00000000927tRNA-synt_1PF00133.222.7e-17011
ENSCSAVP00000000922tRNA-synt_1PF00133.224.9e-16811
ENSCSAVP00000000923tRNA-synt_1PF00133.221e-16612
ENSCSAVP00000000923tRNA-synt_1PF00133.221e-16622
ENSCSAVP00000000921tRNA-synt_1PF00133.222.2e-16611
ENSCSAVP00000000924tRNA-synt_1PF00133.227.1e-16611
ENSCSAVP00000000925tRNA-synt_1PF00133.225.9e-16411
ENSCSAVP00000000926tRNA-synt_1PF00133.221e-15911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000000931-2175-ENSCSAVP00000000921725 (aa)-H2Y6H3
ENSCSAVT00000000932-2472-ENSCSAVP00000000922824 (aa)-H2Y6H4
ENSCSAVT00000000933-2217-ENSCSAVP00000000923739 (aa)-H2Y6H5
ENSCSAVT00000000934-2933-ENSCSAVP00000000924974 (aa)-H2Y6H6
ENSCSAVT00000000935-2532-ENSCSAVP00000000925844 (aa)-H2Y6H7
ENSCSAVT00000000936-2361-ENSCSAVP00000000926787 (aa)-H2Y6H8
ENSCSAVT00000000937-2259-ENSCSAVP00000000927753 (aa)-H2Y6H9
Gene Model
Click here to download ENSCSAVG00000000521's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000521's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000000521-9941.863WBGene00006936glp-48038.976Caenorhabditis_elegans
ENSCSAVG00000000521-9866.495ENSCING00000008182-9566.495Ciona_intestinalis
ENSCSAVG00000000521-7637.188ENSCING00000009087-9932.054Ciona_intestinalis
ENSCSAVG00000000521-9943.727FBgn0027079ValRS8239.978Drosophila_melanogaster
ENSCSAVG00000000521-9941.074YGR094W-8335.936Saccharomyces_cerevisiae

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