EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000000522 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 6390 bases
Position: chrreftig_569:10186-16575
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000930	ResIII	PF04851.15	1.4e-06	1	1
ENSCSAVP00000000929	ResIII	PF04851.15	3.1e-06	1	1
ENSCSAVP00000000928	ResIII	PF04851.15	3.8e-06	1	1
ENSCSAVP00000000930	DEAD	PF00270.29	2.5e-48	1	1
ENSCSAVP00000000929	DEAD	PF00270.29	4.9e-48	1	1
ENSCSAVP00000000928	DEAD	PF00270.29	9.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000938	-	1443	-	ENSCSAVP00000000928	476 (aa)	-	H2Y6I0
ENSCSAVT00000000939	-	1318	-	ENSCSAVP00000000929	428 (aa)	-	H2Y6I1
ENSCSAVT00000000941	-	465	-	ENSCSAVP00000000931	85 (aa)	-	H2Y6I3
ENSCSAVT00000000940	-	1301	-	ENSCSAVP00000000930	425 (aa)	-	H2Y6I2

Gene Model

Click here to download ENSCSAVG00000000522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000000522	-	84	33.643	ENSCSAVG00000001436	-	61	33.643
ENSCSAVG00000000522	-	71	39.739	ENSCSAVG00000006949	-	62	39.739
ENSCSAVG00000000522	-	65	33.333	ENSCSAVG00000004191	-	54	33.333
ENSCSAVG00000000522	-	84	31.190	ENSCSAVG00000004227	-	75	31.726
ENSCSAVG00000000522	-	83	36.798	ENSCSAVG00000008916	-	98	35.693
ENSCSAVG00000000522	-	88	31.733	ENSCSAVG00000009920	-	99	31.733
ENSCSAVG00000000522	-	82	34.605	ENSCSAVG00000004304	-	56	34.605
ENSCSAVG00000000522	-	71	34.568	ENSCSAVG00000004158	-	65	34.568
ENSCSAVG00000000522	-	84	30.310	ENSCSAVG00000010817	-	64	30.310
ENSCSAVG00000000522	-	87	31.078	ENSCSAVG00000003375	-	65	31.078
ENSCSAVG00000000522	-	95	34.211	ENSCSAVG00000003023	-	71	34.211
ENSCSAVG00000000522	-	79	50.000	ENSCSAVG00000003028	-	57	50.000
ENSCSAVG00000000522	-	81	34.286	ENSCSAVG00000002353	-	84	30.909
ENSCSAVG00000000522	-	88	32.626	ENSCSAVG00000002162	-	87	32.626
ENSCSAVG00000000522	-	88	33.512	ENSCSAVG00000000630	-	97	33.512
ENSCSAVG00000000522	-	76	34.049	ENSCSAVG00000002180	-	84	34.049
ENSCSAVG00000000522	-	80	32.303	ENSCSAVG00000003835	-	84	32.303
ENSCSAVG00000000522	-	87	31.183	ENSCSAVG00000003045	-	95	30.539
ENSCSAVG00000000522	-	97	45.985	ENSCSAVG00000011566	-	90	45.985
ENSCSAVG00000000522	-	92	33.417	ENSCSAVG00000004895	-	73	33.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000522	-	99	62.708	ENSG00000105671	DDX49	87	62.708	Homo_sapiens
ENSCSAVG00000000522	-	99	62.945	ENSAPOG00000010961	ddx49	88	62.945	Acanthochromis_polyacanthus
ENSCSAVG00000000522	-	99	62.470	ENSAMEG00000011566	DDX49	87	62.470	Ailuropoda_melanoleuca
ENSCSAVG00000000522	-	99	62.708	ENSACIG00000011029	ddx49	88	62.708	Amphilophus_citrinellus
ENSCSAVG00000000522	-	99	62.945	ENSAOCG00000006257	ddx49	88	62.945	Amphiprion_ocellaris
ENSCSAVG00000000522	-	99	62.945	ENSAPEG00000006367	ddx49	88	62.945	Amphiprion_percula
ENSCSAVG00000000522	-	99	62.470	ENSATEG00000016661	ddx49	88	62.470	Anabas_testudineus
ENSCSAVG00000000522	-	84	62.500	ENSAPLG00000008420	DDX49	86	62.500	Anas_platyrhynchos
ENSCSAVG00000000522	-	99	62.233	ENSANAG00000031415	DDX49	87	62.233	Aotus_nancymaae
ENSCSAVG00000000522	-	99	62.233	ENSACLG00000022538	ddx49	99	62.233	Astatotilapia_calliptera
ENSCSAVG00000000522	-	99	62.381	ENSAMXG00000016919	ddx49	88	62.381	Astyanax_mexicanus
ENSCSAVG00000000522	-	99	62.233	ENSBTAG00000000811	DDX49	87	62.233	Bos_taurus
ENSCSAVG00000000522	-	98	48.104	WBGene00019219	H20J04.4	77	48.413	Caenorhabditis_elegans
ENSCSAVG00000000522	-	99	62.233	ENSCJAG00000042114	DDX49	87	62.233	Callithrix_jacchus
ENSCSAVG00000000522	-	99	62.233	ENSCAFG00000014512	DDX49	86	62.233	Canis_familiaris
ENSCSAVG00000000522	-	99	62.233	ENSCAFG00020012375	DDX49	65	62.233	Canis_lupus_dingo
ENSCSAVG00000000522	-	99	62.470	ENSCHIG00000019910	DDX49	87	62.470	Capra_hircus
ENSCSAVG00000000522	-	99	62.708	ENSTSYG00000028117	DDX49	88	62.708	Carlito_syrichta
ENSCSAVG00000000522	-	97	60.827	ENSCAPG00000012222	DDX49	88	60.827	Cavia_aperea
ENSCSAVG00000000522	-	99	62.233	ENSCPOG00000013626	DDX49	88	62.233	Cavia_porcellus
ENSCSAVG00000000522	-	99	61.995	ENSCCAG00000036092	DDX49	87	61.995	Cebus_capucinus
ENSCSAVG00000000522	-	99	63.007	ENSCATG00000032577	DDX49	87	63.007	Cercocebus_atys
ENSCSAVG00000000522	-	99	61.520	ENSCLAG00000012844	DDX49	89	61.520	Chinchilla_lanigera
ENSCSAVG00000000522	-	99	60.143	ENSCSAG00000005251	DDX49	87	60.143	Chlorocebus_sabaeus
ENSCSAVG00000000522	-	99	64.371	ENSCPBG00000012500	DDX49	88	64.371	Chrysemys_picta_bellii
ENSCSAVG00000000522	-	100	87.765	ENSCING00000008831	-	93	87.765	Ciona_intestinalis
ENSCSAVG00000000522	-	99	58.950	ENSCANG00000030901	DDX49	86	58.950	Colobus_angolensis_palliatus
ENSCSAVG00000000522	-	99	61.520	ENSCGRG00001009467	Ddx49	88	61.520	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000522	-	99	61.520	ENSCGRG00000011487	Ddx49	88	61.520	Cricetulus_griseus_crigri
ENSCSAVG00000000522	-	99	62.768	ENSCSEG00000016139	ddx49	87	62.768	Cynoglossus_semilaevis
ENSCSAVG00000000522	-	99	61.995	ENSCVAG00000010466	ddx49	89	61.995	Cyprinodon_variegatus
ENSCSAVG00000000522	-	99	60.095	ENSDARG00000012899	ddx49	90	60.095	Danio_rerio
ENSCSAVG00000000522	-	94	61.307	ENSDORG00000004301	Ddx49	87	61.307	Dipodomys_ordii
ENSCSAVG00000000522	-	99	48.694	FBgn0010220	Dbp45A	80	48.694	Drosophila_melanogaster
ENSCSAVG00000000522	-	99	62.470	ENSEASG00005006560	DDX49	87	62.470	Equus_asinus_asinus
ENSCSAVG00000000522	-	100	62.353	ENSECAG00000012194	DDX49	87	62.353	Equus_caballus
ENSCSAVG00000000522	-	99	63.895	ENSELUG00000012963	ddx49	88	63.895	Esox_lucius
ENSCSAVG00000000522	-	99	62.470	ENSFCAG00000009760	DDX49	87	62.470	Felis_catus
ENSCSAVG00000000522	-	99	61.758	ENSFDAG00000011064	DDX49	89	61.758	Fukomys_damarensis
ENSCSAVG00000000522	-	99	61.995	ENSGMOG00000007556	ddx49	90	61.995	Gadus_morhua
ENSCSAVG00000000522	-	99	63.658	ENSGALG00000003130	DDX49	99	63.819	Gallus_gallus
ENSCSAVG00000000522	-	99	62.768	ENSGAFG00000004779	ddx49	88	62.768	Gambusia_affinis
ENSCSAVG00000000522	-	99	62.945	ENSGACG00000008047	ddx49	98	62.500	Gasterosteus_aculeatus
ENSCSAVG00000000522	-	99	61.758	ENSGAGG00000022213	DDX49	88	61.758	Gopherus_agassizii
ENSCSAVG00000000522	-	99	62.470	ENSGGOG00000037966	DDX49	87	62.470	Gorilla_gorilla
ENSCSAVG00000000522	-	99	61.995	ENSHBUG00000008991	ddx49	88	61.995	Haplochromis_burtoni
ENSCSAVG00000000522	-	99	62.233	ENSHGLG00000006789	DDX49	89	62.233	Heterocephalus_glaber_female
ENSCSAVG00000000522	-	99	60.570	ENSHGLG00100006283	DDX49	89	60.570	Heterocephalus_glaber_male
ENSCSAVG00000000522	-	99	61.814	ENSHCOG00000008961	ddx49	88	61.814	Hippocampus_comes
ENSCSAVG00000000522	-	99	61.520	ENSIPUG00000005386	ddx49	88	61.520	Ictalurus_punctatus
ENSCSAVG00000000522	-	99	62.233	ENSSTOG00000006749	DDX49	87	62.233	Ictidomys_tridecemlineatus
ENSCSAVG00000000522	-	99	62.708	ENSKMAG00000004909	ddx49	88	62.708	Kryptolebias_marmoratus
ENSCSAVG00000000522	-	99	61.520	ENSLBEG00000027804	ddx49	88	61.520	Labrus_bergylta
ENSCSAVG00000000522	-	99	59.857	ENSLACG00000008244	DDX49	88	59.857	Latimeria_chalumnae
ENSCSAVG00000000522	-	99	63.183	ENSLOCG00000002119	ddx49	87	63.183	Lepisosteus_oculatus
ENSCSAVG00000000522	-	99	63.007	ENSLAFG00000002934	DDX49	87	63.007	Loxodonta_africana
ENSCSAVG00000000522	-	99	63.007	ENSMFAG00000044697	DDX49	87	63.007	Macaca_fascicularis
ENSCSAVG00000000522	-	99	63.007	ENSMMUG00000023293	DDX49	87	63.007	Macaca_mulatta
ENSCSAVG00000000522	-	99	63.007	ENSMNEG00000029654	DDX49	87	63.007	Macaca_nemestrina
ENSCSAVG00000000522	-	99	58.950	ENSMLEG00000042550	DDX49	86	58.950	Mandrillus_leucophaeus
ENSCSAVG00000000522	-	99	63.183	ENSMAMG00000006297	ddx49	88	63.183	Mastacembelus_armatus
ENSCSAVG00000000522	-	99	62.233	ENSMZEG00005016366	ddx49	88	62.233	Maylandia_zebra
ENSCSAVG00000000522	-	99	63.208	ENSMGAG00000004605	DDX49	99	62.563	Meleagris_gallopavo
ENSCSAVG00000000522	-	99	62.233	ENSMAUG00000010235	Ddx49	89	62.233	Mesocricetus_auratus
ENSCSAVG00000000522	-	76	65.031	ENSMICG00000003640	DDX49	78	65.031	Microcebus_murinus
ENSCSAVG00000000522	-	99	62.470	ENSMOCG00000018690	Ddx49	88	62.470	Microtus_ochrogaster
ENSCSAVG00000000522	-	99	61.045	ENSMMOG00000007532	ddx49	89	61.045	Mola_mola
ENSCSAVG00000000522	-	99	61.283	ENSMODG00000003745	DDX49	86	61.283	Monodelphis_domestica
ENSCSAVG00000000522	-	99	62.470	ENSMALG00000018053	ddx49	88	62.470	Monopterus_albus
ENSCSAVG00000000522	-	99	61.758	MGP_CAROLIEiJ_G0031139	Ddx49	88	61.758	Mus_caroli
ENSCSAVG00000000522	-	99	61.758	ENSMUSG00000057788	Ddx49	88	61.758	Mus_musculus
ENSCSAVG00000000522	-	99	61.520	MGP_PahariEiJ_G0021604	Ddx49	88	61.520	Mus_pahari
ENSCSAVG00000000522	-	99	61.758	MGP_SPRETEiJ_G0032257	Ddx49	88	61.758	Mus_spretus
ENSCSAVG00000000522	-	99	62.470	ENSMPUG00000015485	DDX49	87	62.470	Mustela_putorius_furo
ENSCSAVG00000000522	-	99	61.520	ENSMLUG00000012159	DDX49	87	61.520	Myotis_lucifugus
ENSCSAVG00000000522	-	99	62.053	ENSNGAG00000019673	Ddx49	87	61.758	Nannospalax_galili
ENSCSAVG00000000522	-	99	62.233	ENSNBRG00000022025	ddx49	88	62.233	Neolamprologus_brichardi
ENSCSAVG00000000522	-	99	62.470	ENSNLEG00000006136	DDX49	87	62.470	Nomascus_leucogenys
ENSCSAVG00000000522	-	99	61.045	ENSMEUG00000011888	DDX49	95	61.045	Notamacropus_eugenii
ENSCSAVG00000000522	-	99	59.857	ENSOPRG00000003824	DDX49	89	59.857	Ochotona_princeps
ENSCSAVG00000000522	-	99	62.233	ENSODEG00000011203	DDX49	86	62.233	Octodon_degus
ENSCSAVG00000000522	-	99	62.708	ENSONIG00000012731	ddx49	88	62.708	Oreochromis_niloticus
ENSCSAVG00000000522	-	99	63.420	ENSORLG00000008509	ddx49	90	63.420	Oryzias_latipes
ENSCSAVG00000000522	-	99	63.420	ENSORLG00020014661	ddx49	90	63.420	Oryzias_latipes_hni
ENSCSAVG00000000522	-	99	63.183	ENSORLG00015010071	ddx49	90	63.183	Oryzias_latipes_hsok
ENSCSAVG00000000522	-	99	62.708	ENSOMEG00000003733	ddx49	90	62.708	Oryzias_melastigma
ENSCSAVG00000000522	-	99	63.420	ENSOGAG00000008259	DDX49	87	63.420	Otolemur_garnettii
ENSCSAVG00000000522	-	99	61.702	ENSOARG00000010119	-	87	61.702	Ovis_aries
ENSCSAVG00000000522	-	99	62.708	ENSPPAG00000035217	DDX49	87	62.708	Pan_paniscus
ENSCSAVG00000000522	-	99	62.470	ENSPPRG00000013274	DDX49	87	62.470	Panthera_pardus
ENSCSAVG00000000522	-	99	62.470	ENSPTIG00000011259	DDX49	87	62.470	Panthera_tigris_altaica
ENSCSAVG00000000522	-	99	62.708	ENSPTRG00000010725	DDX49	87	62.708	Pan_troglodytes
ENSCSAVG00000000522	-	99	63.007	ENSPANG00000003161	DDX49	87	63.007	Papio_anubis
ENSCSAVG00000000522	-	99	62.945	ENSPKIG00000006013	ddx49	87	62.945	Paramormyrops_kingsleyae
ENSCSAVG00000000522	-	90	62.240	ENSPSIG00000008625	DDX49	87	62.240	Pelodiscus_sinensis
ENSCSAVG00000000522	-	91	61.082	ENSPMGG00000017693	ddx49	87	61.082	Periophthalmus_magnuspinnatus
ENSCSAVG00000000522	-	99	61.283	ENSPEMG00000009238	Ddx49	89	61.283	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000522	-	99	60.993	ENSPMAG00000001195	ddx49	90	60.993	Petromyzon_marinus
ENSCSAVG00000000522	-	99	60.808	ENSPCIG00000001050	DDX49	81	60.808	Phascolarctos_cinereus
ENSCSAVG00000000522	-	99	62.708	ENSPFOG00000000870	ddx49	88	62.708	Poecilia_formosa
ENSCSAVG00000000522	-	99	62.945	ENSPLAG00000016185	ddx49	88	62.945	Poecilia_latipinna
ENSCSAVG00000000522	-	99	63.007	ENSPMEG00000016243	ddx49	88	62.708	Poecilia_mexicana
ENSCSAVG00000000522	-	99	62.233	ENSPREG00000011214	ddx49	88	62.233	Poecilia_reticulata
ENSCSAVG00000000522	-	99	62.708	ENSPPYG00000009755	DDX49	87	62.708	Pongo_abelii
ENSCSAVG00000000522	-	99	62.945	ENSPCAG00000002310	DDX49	88	62.945	Procavia_capensis
ENSCSAVG00000000522	-	99	62.708	ENSPCOG00000024973	DDX49	88	62.708	Propithecus_coquereli
ENSCSAVG00000000522	-	99	59.905	ENSPVAG00000015468	DDX49	86	59.905	Pteropus_vampyrus
ENSCSAVG00000000522	-	99	62.708	ENSPNYG00000016672	ddx49	89	62.708	Pundamilia_nyererei
ENSCSAVG00000000522	-	99	63.183	ENSPNAG00000003429	ddx49	90	62.439	Pygocentrus_nattereri
ENSCSAVG00000000522	-	99	61.995	ENSRNOG00000022368	Ddx49	88	61.995	Rattus_norvegicus
ENSCSAVG00000000522	-	99	63.007	ENSRBIG00000030758	DDX49	87	63.007	Rhinopithecus_bieti
ENSCSAVG00000000522	-	99	62.768	ENSRROG00000032460	DDX49	87	62.768	Rhinopithecus_roxellana
ENSCSAVG00000000522	-	97	44.131	YHR169W	-	98	44.131	Saccharomyces_cerevisiae
ENSCSAVG00000000522	-	99	62.233	ENSSBOG00000035812	DDX49	93	62.233	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000522	-	99	61.905	ENSSHAG00000010982	DDX49	82	61.905	Sarcophilus_harrisii
ENSCSAVG00000000522	-	99	62.708	ENSSFOG00015021150	ddx49	88	62.708	Scleropages_formosus
ENSCSAVG00000000522	-	99	62.708	ENSSMAG00000021016	ddx49	88	62.708	Scophthalmus_maximus
ENSCSAVG00000000522	-	99	62.233	ENSSDUG00000009696	ddx49	86	62.233	Seriola_dumerili
ENSCSAVG00000000522	-	99	62.233	ENSSLDG00000006958	ddx49	88	62.233	Seriola_lalandi_dorsalis
ENSCSAVG00000000522	-	67	59.507	ENSSARG00000003669	DDX49	99	59.507	Sorex_araneus
ENSCSAVG00000000522	-	99	62.233	ENSSPUG00000010688	DDX49	88	62.233	Sphenodon_punctatus
ENSCSAVG00000000522	-	99	62.470	ENSSPAG00000011486	ddx49	88	62.470	Stegastes_partitus
ENSCSAVG00000000522	-	99	62.470	ENSSSCG00000025329	DDX49	88	62.470	Sus_scrofa
ENSCSAVG00000000522	-	99	61.758	ENSTRUG00000021524	ddx49	88	61.758	Takifugu_rubripes
ENSCSAVG00000000522	-	99	62.884	ENSTNIG00000010188	ddx49	88	62.884	Tetraodon_nigroviridis
ENSCSAVG00000000522	-	63	72.289	ENSTBEG00000005967	-	56	72.289	Tupaia_belangeri
ENSCSAVG00000000522	-	99	57.482	ENSTTRG00000003818	DDX49	87	57.482	Tursiops_truncatus
ENSCSAVG00000000522	-	99	62.470	ENSUAMG00000007088	DDX49	84	62.470	Ursus_americanus
ENSCSAVG00000000522	-	99	62.470	ENSUMAG00000006489	DDX49	90	62.470	Ursus_maritimus
ENSCSAVG00000000522	-	99	62.233	ENSVVUG00000007767	DDX49	84	62.233	Vulpes_vulpes
ENSCSAVG00000000522	-	99	63.333	ENSXETG00000010135	ddx49	87	63.333	Xenopus_tropicalis
ENSCSAVG00000000522	-	85	59.890	ENSXCOG00000005756	ddx49	84	59.890	Xiphophorus_couchianus
ENSCSAVG00000000522	-	99	63.183	ENSXMAG00000002554	ddx49	88	63.183	Xiphophorus_maculatus