EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000525 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 6800 bases
Position: chrreftig_209:195334-202133
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000934	Dus	PF01207.17	3.9e-56	1	1
ENSCSAVP00000000936	Dus	PF01207.17	4.1e-56	1	1
ENSCSAVP00000000935	Dus	PF01207.17	4.1e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000945	-	1853	-	ENSCSAVP00000000935	554 (aa)	-	H2Y6I7
ENSCSAVT00000000944	-	1802	-	ENSCSAVP00000000934	535 (aa)	-	H2Y6I6
ENSCSAVT00000000946	-	1821	-	ENSCSAVP00000000936	546 (aa)	-	H2Y6I8

Gene Model

Click here to download ENSCSAVG00000000525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000525	-	100	57.040	ENSG00000141994	DUS3L	88	70.112	Homo_sapiens
ENSCSAVG00000000525	-	100	56.272	ENSAPOG00000016764	dus3l	87	56.272	Acanthochromis_polyacanthus
ENSCSAVG00000000525	-	100	55.197	ENSAMEG00000012423	-	85	55.197	Ailuropoda_melanoleuca
ENSCSAVG00000000525	-	100	55.914	ENSAOCG00000004343	dus3l	87	55.914	Amphiprion_ocellaris
ENSCSAVG00000000525	-	100	55.018	ENSAPEG00000005828	dus3l	87	55.676	Amphiprion_percula
ENSCSAVG00000000525	-	100	54.496	ENSATEG00000011064	dus3l	87	54.595	Anabas_testudineus
ENSCSAVG00000000525	-	100	59.259	ENSAPLG00000004636	-	88	59.259	Anas_platyrhynchos
ENSCSAVG00000000525	-	94	41.874	ENSACAG00000012955	-	85	41.874	Anolis_carolinensis
ENSCSAVG00000000525	-	100	56.452	ENSANAG00000021997	DUS3L	86	70.370	Aotus_nancymaae
ENSCSAVG00000000525	-	100	57.934	ENSACLG00000011576	dus3l	87	57.934	Astatotilapia_calliptera
ENSCSAVG00000000525	-	100	43.784	ENSAMXG00000043269	dus3l	84	43.964	Astyanax_mexicanus
ENSCSAVG00000000525	-	100	55.674	ENSBTAG00000011842	DUS3L	85	55.674	Bos_taurus
ENSCSAVG00000000525	-	100	44.624	WBGene00021377	Y37E11B.5	93	45.120	Caenorhabditis_elegans
ENSCSAVG00000000525	-	100	56.600	ENSCJAG00000016997	DUS3L	88	69.553	Callithrix_jacchus
ENSCSAVG00000000525	-	100	56.272	ENSCAFG00000018762	DUS3L	85	56.272	Canis_familiaris
ENSCSAVG00000000525	-	100	56.272	ENSCAFG00020018976	-	85	56.272	Canis_lupus_dingo
ENSCSAVG00000000525	-	100	56.577	ENSCHIG00000021327	-	87	56.577	Capra_hircus
ENSCSAVG00000000525	-	100	51.913	ENSCAPG00000012525	DUS3L	91	51.913	Cavia_aperea
ENSCSAVG00000000525	-	100	56.772	ENSCPOG00000021236	DUS3L	84	56.772	Cavia_porcellus
ENSCSAVG00000000525	-	100	55.575	ENSCCAG00000036889	DUS3L	86	70.370	Cebus_capucinus
ENSCSAVG00000000525	-	100	56.810	ENSCATG00000040809	DUS3L	86	70.655	Cercocebus_atys
ENSCSAVG00000000525	-	100	55.576	ENSCLAG00000008470	DUS3L	85	55.674	Chinchilla_lanigera
ENSCSAVG00000000525	-	100	56.631	ENSCSAG00000009883	DUS3L	85	56.631	Chlorocebus_sabaeus
ENSCSAVG00000000525	-	100	53.231	ENSCPBG00000011136	-	85	53.231	Chrysemys_picta_bellii
ENSCSAVG00000000525	-	100	79.167	ENSCING00000004940	zf(c3h)-5	90	79.167	Ciona_intestinalis
ENSCSAVG00000000525	-	100	56.810	ENSCANG00000036677	DUS3L	86	70.655	Colobus_angolensis_palliatus
ENSCSAVG00000000525	-	100	57.169	ENSCGRG00001023361	Dus3l	85	57.169	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000525	-	100	57.169	ENSCGRG00000005214	Dus3l	85	57.169	Cricetulus_griseus_crigri
ENSCSAVG00000000525	-	100	55.102	ENSCSEG00000014994	dus3l	89	55.102	Cynoglossus_semilaevis
ENSCSAVG00000000525	-	96	52.427	ENSCVAG00000007874	dus3l	86	51.673	Cyprinodon_variegatus
ENSCSAVG00000000525	-	100	53.356	ENSDARG00000099528	dus3l	100	69.778	Danio_rerio
ENSCSAVG00000000525	-	66	46.978	ENSDNOG00000048551	-	75	47.765	Dasypus_novemcinctus
ENSCSAVG00000000525	-	66	68.839	ENSDORG00000006754	Dus3l	68	68.839	Dipodomys_ordii
ENSCSAVG00000000525	-	99	48.468	FBgn0032819	CG10463	91	48.393	Drosophila_melanogaster
ENSCSAVG00000000525	-	100	51.332	ENSEBUG00000010532	dus3l	78	51.060	Eptatretus_burgeri
ENSCSAVG00000000525	-	58	45.511	ENSEASG00005023094	-	69	45.483	Equus_asinus_asinus
ENSCSAVG00000000525	-	100	54.845	ENSECAG00000019359	-	82	54.845	Equus_caballus
ENSCSAVG00000000525	-	100	55.080	ENSELUG00000015033	dus3l	91	54.495	Esox_lucius
ENSCSAVG00000000525	-	100	55.914	ENSFCAG00000027534	-	88	68.436	Felis_catus
ENSCSAVG00000000525	-	99	48.112	ENSFALG00000001343	-	90	48.203	Ficedula_albicollis
ENSCSAVG00000000525	-	100	50.279	ENSFDAG00000014182	DUS3L	83	50.838	Fukomys_damarensis
ENSCSAVG00000000525	-	100	56.475	ENSFHEG00000010091	dus3l	86	56.475	Fundulus_heteroclitus
ENSCSAVG00000000525	-	69	66.216	ENSGMOG00000011366	dus3l	96	66.396	Gadus_morhua
ENSCSAVG00000000525	-	100	56.055	ENSGALG00000001800	-	84	56.055	Gallus_gallus
ENSCSAVG00000000525	-	100	55.971	ENSGAFG00000008857	dus3l	86	55.971	Gambusia_affinis
ENSCSAVG00000000525	-	97	65.676	ENSGACG00000004109	dus3l	90	55.797	Gasterosteus_aculeatus
ENSCSAVG00000000525	-	100	56.852	ENSGAGG00000005527	-	95	52.389	Gopherus_agassizii
ENSCSAVG00000000525	-	100	52.509	ENSGGOG00000027433	DUS3L	86	63.966	Gorilla_gorilla
ENSCSAVG00000000525	-	100	58.041	ENSHBUG00000022232	dus3l	87	58.041	Haplochromis_burtoni
ENSCSAVG00000000525	-	100	56.859	ENSHGLG00000013475	DUS3L	85	56.859	Heterocephalus_glaber_female
ENSCSAVG00000000525	-	100	57.040	ENSHGLG00100007077	DUS3L	85	57.040	Heterocephalus_glaber_male
ENSCSAVG00000000525	-	100	56.261	ENSHCOG00000016072	dus3l	87	56.261	Hippocampus_comes
ENSCSAVG00000000525	-	100	55.240	ENSIPUG00000004025	dus3l	87	55.240	Ictalurus_punctatus
ENSCSAVG00000000525	-	100	56.962	ENSSTOG00000025017	DUS3L	85	56.962	Ictidomys_tridecemlineatus
ENSCSAVG00000000525	-	100	54.891	ENSJJAG00000023742	Dus3l	87	54.891	Jaculus_jaculus
ENSCSAVG00000000525	-	100	55.755	ENSKMAG00000009675	dus3l	87	55.755	Kryptolebias_marmoratus
ENSCSAVG00000000525	-	100	55.784	ENSLBEG00000015795	dus3l	85	55.784	Labrus_bergylta
ENSCSAVG00000000525	-	100	54.050	ENSLACG00000001204	dus3l	86	54.050	Latimeria_chalumnae
ENSCSAVG00000000525	-	100	67.116	ENSLOCG00000010531	dus3l	78	67.116	Lepisosteus_oculatus
ENSCSAVG00000000525	-	100	57.219	ENSLAFG00000027552	-	84	57.245	Loxodonta_africana
ENSCSAVG00000000525	-	100	56.810	ENSMFAG00000031910	DUS3L	86	70.655	Macaca_fascicularis
ENSCSAVG00000000525	-	66	70.940	ENSMMUG00000031027	DUS3L	86	70.940	Macaca_mulatta
ENSCSAVG00000000525	-	83	68.050	ENSMNEG00000036509	DUS3L	82	68.050	Macaca_nemestrina
ENSCSAVG00000000525	-	100	56.810	ENSMLEG00000043222	DUS3L	86	70.655	Mandrillus_leucophaeus
ENSCSAVG00000000525	-	100	55.773	ENSMAMG00000015637	dus3l	87	55.773	Mastacembelus_armatus
ENSCSAVG00000000525	-	100	57.934	ENSMZEG00005026661	dus3l	87	57.934	Maylandia_zebra
ENSCSAVG00000000525	-	100	57.527	ENSMGAG00000001547	-	88	57.527	Meleagris_gallopavo
ENSCSAVG00000000525	-	100	56.545	ENSMAUG00000008347	Dus3l	86	56.545	Mesocricetus_auratus
ENSCSAVG00000000525	-	100	55.235	ENSMICG00000007097	DUS3L	84	55.235	Microcebus_murinus
ENSCSAVG00000000525	-	100	57.195	ENSMOCG00000021796	Dus3l	86	57.195	Microtus_ochrogaster
ENSCSAVG00000000525	-	100	56.215	ENSMMOG00000018377	dus3l	85	56.215	Mola_mola
ENSCSAVG00000000525	-	100	55.348	ENSMODG00000001339	-	81	55.348	Monodelphis_domestica
ENSCSAVG00000000525	-	100	55.823	ENSMALG00000007559	dus3l	84	55.823	Monopterus_albus
ENSCSAVG00000000525	-	100	56.318	MGP_CAROLIEiJ_G0021789	Dus3l	86	56.420	Mus_caroli
ENSCSAVG00000000525	-	100	56.341	ENSMUSG00000007603	Dus3l	86	56.420	Mus_musculus
ENSCSAVG00000000525	-	100	56.159	MGP_PahariEiJ_G0020778	Dus3l	86	56.239	Mus_pahari
ENSCSAVG00000000525	-	100	56.341	MGP_SPRETEiJ_G0022700	Dus3l	86	56.420	Mus_spretus
ENSCSAVG00000000525	-	100	57.143	ENSMPUG00000006188	-	85	57.143	Mustela_putorius_furo
ENSCSAVG00000000525	-	100	56.607	ENSMLUG00000007159	-	85	56.607	Myotis_lucifugus
ENSCSAVG00000000525	-	100	57.514	ENSNGAG00000017157	Dus3l	85	57.514	Nannospalax_galili
ENSCSAVG00000000525	-	100	54.579	ENSNBRG00000015011	dus3l	85	54.579	Neolamprologus_brichardi
ENSCSAVG00000000525	-	100	56.781	ENSNLEG00000013734	DUS3L	86	70.655	Nomascus_leucogenys
ENSCSAVG00000000525	-	90	59.400	ENSMEUG00000014401	-	100	59.281	Notamacropus_eugenii
ENSCSAVG00000000525	-	80	68.304	ENSOPRG00000000954	DUS3L	70	68.444	Ochotona_princeps
ENSCSAVG00000000525	-	100	56.957	ENSODEG00000015771	DUS3L	87	56.957	Octodon_degus
ENSCSAVG00000000525	-	100	57.934	ENSONIG00000019793	dus3l	87	57.934	Oreochromis_niloticus
ENSCSAVG00000000525	-	100	53.263	ENSOANG00000004386	-	83	53.263	Ornithorhynchus_anatinus
ENSCSAVG00000000525	-	100	55.856	ENSORLG00000030245	dus3l	86	55.856	Oryzias_latipes
ENSCSAVG00000000525	-	100	57.377	ENSOMEG00000023500	dus3l	85	57.377	Oryzias_melastigma
ENSCSAVG00000000525	-	100	55.054	ENSOGAG00000016549	DUS3L	85	55.054	Otolemur_garnettii
ENSCSAVG00000000525	-	88	49.304	ENSOARG00000007052	-	83	49.304	Ovis_aries
ENSCSAVG00000000525	-	100	56.452	ENSPPAG00000038054	DUS3L	88	69.832	Pan_paniscus
ENSCSAVG00000000525	-	100	56.810	ENSPPRG00000000633	-	88	68.715	Panthera_pardus
ENSCSAVG00000000525	-	100	56.452	ENSPTRG00000010343	DUS3L	88	69.832	Pan_troglodytes
ENSCSAVG00000000525	-	100	50.926	ENSPANG00000015039	DUS3L	85	65.242	Papio_anubis
ENSCSAVG00000000525	-	100	54.197	ENSPKIG00000018035	dus3l	85	54.197	Paramormyrops_kingsleyae
ENSCSAVG00000000525	-	100	54.762	ENSPSIG00000004965	-	95	54.762	Pelodiscus_sinensis
ENSCSAVG00000000525	-	100	57.836	ENSPMGG00000021422	dus3l	83	57.836	Periophthalmus_magnuspinnatus
ENSCSAVG00000000525	-	100	57.169	ENSPEMG00000020784	Dus3l	86	57.169	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000525	-	100	55.354	ENSPMAG00000007671	dus3l	85	55.354	Petromyzon_marinus
ENSCSAVG00000000525	-	63	69.139	ENSPCIG00000008483	-	96	69.345	Phascolarctos_cinereus
ENSCSAVG00000000525	-	100	55.914	ENSPFOG00000006750	dus3l	86	55.914	Poecilia_formosa
ENSCSAVG00000000525	-	100	57.459	ENSPLAG00000011636	dus3l	86	57.459	Poecilia_latipinna
ENSCSAVG00000000525	-	100	57.435	ENSPMEG00000011343	dus3l	85	57.435	Poecilia_mexicana
ENSCSAVG00000000525	-	100	55.556	ENSPREG00000012315	dus3l	86	55.556	Poecilia_reticulata
ENSCSAVG00000000525	-	100	54.659	ENSPPYG00000009435	DUS3L	84	54.659	Pongo_abelii
ENSCSAVG00000000525	-	100	55.776	ENSPCOG00000026203	DUS3L	84	55.776	Propithecus_coquereli
ENSCSAVG00000000525	-	69	68.881	ENSPVAG00000010503	-	57	68.881	Pteropus_vampyrus
ENSCSAVG00000000525	-	100	58.088	ENSPNYG00000009052	dus3l	87	58.088	Pundamilia_nyererei
ENSCSAVG00000000525	-	100	56.383	ENSPNAG00000022347	dus3l	85	56.383	Pygocentrus_nattereri
ENSCSAVG00000000525	-	100	56.159	ENSRNOG00000050381	Dus3l	86	56.159	Rattus_norvegicus
ENSCSAVG00000000525	-	100	45.341	ENSRBIG00000025322	DUS3L	83	74.242	Rhinopithecus_bieti
ENSCSAVG00000000525	-	100	56.452	ENSRROG00000037008	DUS3L	86	70.370	Rhinopithecus_roxellana
ENSCSAVG00000000525	-	99	36.007	YLR401C	-	88	36.639	Saccharomyces_cerevisiae
ENSCSAVG00000000525	-	100	56.283	ENSSBOG00000020402	DUS3L	86	70.655	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000525	-	100	58.640	ENSSHAG00000014156	-	84	58.640	Sarcophilus_harrisii
ENSCSAVG00000000525	-	96	62.916	ENSSFOG00015008797	dus3l	84	55.659	Scleropages_formosus
ENSCSAVG00000000525	-	100	57.621	ENSSMAG00000004896	dus3l	88	57.621	Scophthalmus_maximus
ENSCSAVG00000000525	-	100	57.143	ENSSDUG00000013517	dus3l	88	57.143	Seriola_dumerili
ENSCSAVG00000000525	-	100	57.143	ENSSLDG00000016115	dus3l	87	56.452	Seriola_lalandi_dorsalis
ENSCSAVG00000000525	-	62	66.163	ENSSPUG00000011128	-	94	66.163	Sphenodon_punctatus
ENSCSAVG00000000525	-	100	51.756	ENSSPAG00000018660	dus3l	86	54.323	Stegastes_partitus
ENSCSAVG00000000525	-	100	55.893	ENSSSCG00000040968	-	84	55.893	Sus_scrofa
ENSCSAVG00000000525	-	100	55.154	ENSTGUG00000001021	-	88	55.154	Taeniopygia_guttata
ENSCSAVG00000000525	-	60	46.224	ENSTGUG00000014885	-	100	46.224	Taeniopygia_guttata
ENSCSAVG00000000525	-	100	56.080	ENSTRUG00000013055	dus3l	86	56.284	Takifugu_rubripes
ENSCSAVG00000000525	-	99	66.216	ENSTNIG00000017537	dus3l	78	66.216	Tetraodon_nigroviridis
ENSCSAVG00000000525	-	100	57.914	ENSUAMG00000024269	-	98	57.407	Ursus_americanus
ENSCSAVG00000000525	-	100	50.613	ENSUMAG00000010831	-	85	50.613	Ursus_maritimus
ENSCSAVG00000000525	-	100	55.872	ENSVVUG00000013781	-	85	55.872	Vulpes_vulpes
ENSCSAVG00000000525	-	100	57.514	ENSXETG00000027405	dus3l	84	57.514	Xenopus_tropicalis
ENSCSAVG00000000525	-	69	66.757	ENSXCOG00000019852	dus3l	88	66.757	Xiphophorus_couchianus
ENSCSAVG00000000525	-	100	55.735	ENSXMAG00000015252	dus3l	85	55.735	Xiphophorus_maculatus