EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000541 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3577 bases
Position: chrreftig_209:208151-211727
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000969	Bud13	PF09736.9	2.9e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000000979	-	1415	-	ENSCSAVP00000000969	269 (aa)	-	H2Y6M1
ENSCSAVT00000000980	-	744	-	ENSCSAVP00000000970	139 (aa)	-	H2Y6M2

Gene Model

Click here to download ENSCSAVG00000000541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000541	-	97	40.152	ENSG00000137656	BUD13	52	39.544	Homo_sapiens
ENSCSAVG00000000541	-	97	43.682	ENSATEG00000021254	si:dkeyp-69c1.6	50	42.909	Anabas_testudineus
ENSCSAVG00000000541	-	99	44.128	ENSAMXG00000004165	si:dkeyp-69c1.6	51	42.143	Astyanax_mexicanus
ENSCSAVG00000000541	-	97	40.152	ENSCCAG00000024422	BUD13	53	39.544	Cebus_capucinus
ENSCSAVG00000000541	-	96	41.985	ENSCPBG00000020276	BUD13	74	41.985	Chrysemys_picta_bellii
ENSCSAVG00000000541	-	99	63.545	ENSCING00000006692	-	61	63.880	Ciona_intestinalis
ENSCSAVG00000000541	-	96	35.985	ENSEBUG00000012952	si:dkeyp-69c1.6	50	36.940	Eptatretus_burgeri
ENSCSAVG00000000541	-	74	47.291	ENSELUG00000011399	si:dkeyp-69c1.6	58	42.086	Esox_lucius
ENSCSAVG00000000541	-	98	44.128	ENSGMOG00000002316	si:dkeyp-69c1.6	56	44.128	Gadus_morhua
ENSCSAVG00000000541	-	97	44.565	ENSGACG00000020632	si:dkeyp-69c1.6	53	43.431	Gasterosteus_aculeatus
ENSCSAVG00000000541	-	93	42.126	ENSGAGG00000010543	BUD13	55	41.176	Gopherus_agassizii
ENSCSAVG00000000541	-	97	42.642	ENSIPUG00000001490	bud13	51	41.948	Ictalurus_punctatus
ENSCSAVG00000000541	-	98	42.545	ENSKMAG00000022255	si:dkeyp-69c1.6	57	42.545	Kryptolebias_marmoratus
ENSCSAVG00000000541	-	98	42.456	ENSLOCG00000005915	si:dkeyp-69c1.6	56	41.404	Lepisosteus_oculatus
ENSCSAVG00000000541	-	97	40.152	ENSMMUG00000020002	BUD13	52	39.544	Macaca_mulatta
ENSCSAVG00000000541	-	73	33.971	ENSMZEG00005018954	-	51	33.014	Maylandia_zebra
ENSCSAVG00000000541	-	65	41.954	ENSMGAG00000003081	BUD13	67	41.975	Meleagris_gallopavo
ENSCSAVG00000000541	-	96	40.304	ENSMICG00000002320	BUD13	52	39.695	Microcebus_murinus
ENSCSAVG00000000541	-	99	42.955	ENSMMOG00000018777	si:dkeyp-69c1.6	64	41.924	Mola_mola
ENSCSAVG00000000541	-	97	40.824	ENSMUSG00000032077	Bud13	90	45.238	Mus_musculus
ENSCSAVG00000000541	-	97	40.824	MGP_SPRETEiJ_G0033299	Bud13	68	45.509	Mus_spretus
ENSCSAVG00000000541	-	97	39.924	ENSOANG00000004370	-	67	39.706	Ornithorhynchus_anatinus
ENSCSAVG00000000541	-	74	49.500	ENSORLG00000005682	si:dkeyp-69c1.6	50	43.060	Oryzias_latipes
ENSCSAVG00000000541	-	74	49.500	ENSORLG00020008669	si:dkeyp-69c1.6	51	43.431	Oryzias_latipes_hni
ENSCSAVG00000000541	-	74	49.500	ENSOMEG00000018921	si:dkeyp-69c1.6	51	43.110	Oryzias_melastigma
ENSCSAVG00000000541	-	97	41.288	ENSPTIG00000010320	BUD13	53	41.065	Panthera_tigris_altaica
ENSCSAVG00000000541	-	98	40.476	ENSPMGG00000005014	si:dkeyp-69c1.6	58	42.336	Periophthalmus_magnuspinnatus
ENSCSAVG00000000541	-	96	39.623	ENSPCOG00000022101	BUD13	66	39.015	Propithecus_coquereli
ENSCSAVG00000000541	-	97	39.773	ENSSBOG00000033988	BUD13	53	39.544	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000541	-	97	40.569	ENSSFOG00015005820	si:dkeyp-69c1.6	53	40.569	Scleropages_formosus
ENSCSAVG00000000541	-	97	40.569	ENSSMAG00000010031	si:dkeyp-69c1.6	54	41.304	Scophthalmus_maximus
ENSCSAVG00000000541	-	99	43.123	ENSSDUG00000004190	si:dkeyp-69c1.6	52	42.379	Seriola_dumerili
ENSCSAVG00000000541	-	99	42.697	ENSSLDG00000017222	si:dkeyp-69c1.6	50	42.322	Seriola_lalandi_dorsalis
ENSCSAVG00000000541	-	99	43.165	ENSTNIG00000009983	si:dkeyp-69c1.6	53	42.806	Tetraodon_nigroviridis