EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000559 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 6428 bases
Position: chrreftig_569:21264-27691
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000000991	MRP-L46	PF11788.8	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001002	-	1211	-	ENSCSAVP00000000991	298 (aa)	-	H2Y6P3

Gene Model

Click here to download ENSCSAVG00000000559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000559	-	82	34.274	ENSG00000259494	MRPL46	84	34.274	Homo_sapiens
ENSCSAVG00000000559	-	87	35.714	ENSAPOG00000018725	mrpl46	87	35.714	Acanthochromis_polyacanthus
ENSCSAVG00000000559	-	85	34.615	ENSAMEG00000012769	-	88	34.615	Ailuropoda_melanoleuca
ENSCSAVG00000000559	-	84	33.465	ENSACIG00000007620	mrpl46	83	33.465	Amphilophus_citrinellus
ENSCSAVG00000000559	-	87	34.848	ENSAOCG00000014108	mrpl46	86	34.848	Amphiprion_ocellaris
ENSCSAVG00000000559	-	87	34.848	ENSAPEG00000006612	mrpl46	86	34.848	Amphiprion_percula
ENSCSAVG00000000559	-	99	31.126	ENSATEG00000005654	mrpl46	99	31.126	Anabas_testudineus
ENSCSAVG00000000559	-	79	33.891	ENSAPLG00000013089	MRPL46	99	33.891	Anas_platyrhynchos
ENSCSAVG00000000559	-	82	33.469	ENSANAG00000023769	MRPL46	84	33.469	Aotus_nancymaae
ENSCSAVG00000000559	-	84	32.296	ENSACLG00000019884	mrpl46	82	32.677	Astatotilapia_calliptera
ENSCSAVG00000000559	-	99	31.894	ENSAMXG00000030876	mrpl46	85	31.894	Astyanax_mexicanus
ENSCSAVG00000000559	-	82	34.818	ENSBTAG00000019830	MRPL46	84	34.818	Bos_taurus
ENSCSAVG00000000559	-	78	30.435	WBGene00021935	mrpl-46	89	30.435	Caenorhabditis_elegans
ENSCSAVG00000000559	-	82	33.197	ENSCJAG00000044238	-	79	33.197	Callithrix_jacchus
ENSCSAVG00000000559	-	82	33.197	ENSCJAG00000013019	-	84	33.197	Callithrix_jacchus
ENSCSAVG00000000559	-	82	35.200	ENSCAFG00000011492	MRPL46	79	35.200	Canis_familiaris
ENSCSAVG00000000559	-	82	35.200	ENSCAFG00020018871	MRPL46	79	35.200	Canis_lupus_dingo
ENSCSAVG00000000559	-	82	34.413	ENSCHIG00000015964	MRPL46	84	34.413	Capra_hircus
ENSCSAVG00000000559	-	82	33.607	ENSTSYG00000011162	MRPL46	84	33.607	Carlito_syrichta
ENSCSAVG00000000559	-	85	33.333	ENSCPOG00000040189	MRPL46	87	33.333	Cavia_porcellus
ENSCSAVG00000000559	-	82	32.787	ENSCCAG00000026434	MRPL46	84	32.787	Cebus_capucinus
ENSCSAVG00000000559	-	82	34.677	ENSCATG00000041595	MRPL46	74	34.677	Cercocebus_atys
ENSCSAVG00000000559	-	82	32.258	ENSCLAG00000017048	MRPL46	82	32.258	Chinchilla_lanigera
ENSCSAVG00000000559	-	85	34.496	ENSCSAG00000017201	MRPL46	77	34.496	Chlorocebus_sabaeus
ENSCSAVG00000000559	-	81	35.124	ENSCPBG00000017913	MRPL46	83	35.124	Chrysemys_picta_bellii
ENSCSAVG00000000559	-	82	34.677	ENSCANG00000037267	MRPL46	87	34.109	Colobus_angolensis_palliatus
ENSCSAVG00000000559	-	82	32.794	ENSCGRG00001001727	Mrpl46	84	32.794	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000559	-	91	31.522	ENSCGRG00000002612	Mrpl46	95	31.522	Cricetulus_griseus_crigri
ENSCSAVG00000000559	-	82	35.178	ENSCSEG00000010621	mrpl46	80	35.178	Cynoglossus_semilaevis
ENSCSAVG00000000559	-	70	34.579	ENSCVAG00000018564	mrpl46	87	34.579	Cyprinodon_variegatus
ENSCSAVG00000000559	-	82	34.274	ENSDARG00000016307	mrpl46	83	35.081	Danio_rerio
ENSCSAVG00000000559	-	82	33.878	ENSDNOG00000017151	MRPL46	84	33.878	Dasypus_novemcinctus
ENSCSAVG00000000559	-	69	37.321	FBgn0035272	mRpL46	79	37.321	Drosophila_melanogaster
ENSCSAVG00000000559	-	82	33.745	ENSETEG00000005085	MRPL46	84	33.745	Echinops_telfairi
ENSCSAVG00000000559	-	100	31.788	ENSEBUG00000008986	mrpl46	99	31.788	Eptatretus_burgeri
ENSCSAVG00000000559	-	82	34.127	ENSEASG00005015372	MRPL46	84	34.127	Equus_asinus_asinus
ENSCSAVG00000000559	-	82	34.524	ENSECAG00000007635	MRPL46	84	34.524	Equus_caballus
ENSCSAVG00000000559	-	94	32.624	ENSEEUG00000007892	MRPL46	97	32.624	Erinaceus_europaeus
ENSCSAVG00000000559	-	87	32.222	ENSELUG00000016469	mrpl46	87	32.222	Esox_lucius
ENSCSAVG00000000559	-	82	34.677	ENSFCAG00000014966	MRPL46	84	34.677	Felis_catus
ENSCSAVG00000000559	-	81	33.469	ENSFALG00000010432	MRPL46	87	33.469	Ficedula_albicollis
ENSCSAVG00000000559	-	82	33.871	ENSFDAG00000011643	MRPL46	73	33.871	Fukomys_damarensis
ENSCSAVG00000000559	-	83	35.060	ENSFHEG00000013987	mrpl46	82	35.060	Fundulus_heteroclitus
ENSCSAVG00000000559	-	81	31.855	ENSGMOG00000018618	mrpl46	90	32.258	Gadus_morhua
ENSCSAVG00000000559	-	81	35.102	ENSGALG00000006782	MRPL46	83	35.484	Gallus_gallus
ENSCSAVG00000000559	-	84	32.411	ENSGAFG00000001964	mrpl46	70	32.411	Gambusia_affinis
ENSCSAVG00000000559	-	89	34.432	ENSGACG00000014786	mrpl46	94	34.432	Gasterosteus_aculeatus
ENSCSAVG00000000559	-	81	34.286	ENSGAGG00000013560	MRPL46	87	34.286	Gopherus_agassizii
ENSCSAVG00000000559	-	82	33.468	ENSGGOG00000015148	MRPL46	84	33.468	Gorilla_gorilla
ENSCSAVG00000000559	-	86	32.319	ENSHBUG00000019818	mrpl46	84	32.692	Haplochromis_burtoni
ENSCSAVG00000000559	-	91	31.379	ENSHGLG00000007404	MRPL46	95	31.379	Heterocephalus_glaber_female
ENSCSAVG00000000559	-	91	31.379	ENSHGLG00100008704	MRPL46	95	31.379	Heterocephalus_glaber_male
ENSCSAVG00000000559	-	82	34.137	ENSHCOG00000001350	mrpl46	80	33.871	Hippocampus_comes
ENSCSAVG00000000559	-	81	36.437	ENSIPUG00000022487	mrpl46	82	36.437	Ictalurus_punctatus
ENSCSAVG00000000559	-	92	31.724	ENSSTOG00000011555	MRPL46	96	31.724	Ictidomys_tridecemlineatus
ENSCSAVG00000000559	-	82	34.677	ENSJJAG00000003742	-	82	34.677	Jaculus_jaculus
ENSCSAVG00000000559	-	82	36.694	ENSKMAG00000000840	mrpl46	81	36.694	Kryptolebias_marmoratus
ENSCSAVG00000000559	-	82	35.887	ENSLAFG00000011931	MRPL46	84	35.887	Loxodonta_africana
ENSCSAVG00000000559	-	85	34.496	ENSMFAG00000037394	MRPL46	87	34.496	Macaca_fascicularis
ENSCSAVG00000000559	-	85	34.109	ENSMMUG00000013658	MRPL46	87	34.109	Macaca_mulatta
ENSCSAVG00000000559	-	85	34.496	ENSMNEG00000041721	MRPL46	77	34.496	Macaca_nemestrina
ENSCSAVG00000000559	-	82	34.677	ENSMLEG00000043694	MRPL46	84	34.677	Mandrillus_leucophaeus
ENSCSAVG00000000559	-	83	34.661	ENSMAMG00000006593	mrpl46	82	34.661	Mastacembelus_armatus
ENSCSAVG00000000559	-	84	32.296	ENSMZEG00005005163	mrpl46	82	32.677	Maylandia_zebra
ENSCSAVG00000000559	-	82	34.677	ENSMGAG00000008771	MRPL46	93	34.677	Meleagris_gallopavo
ENSCSAVG00000000559	-	82	32.245	ENSMAUG00000009443	Mrpl46	84	32.245	Mesocricetus_auratus
ENSCSAVG00000000559	-	82	35.102	ENSMICG00000015826	MRPL46	84	35.102	Microcebus_murinus
ENSCSAVG00000000559	-	82	33.468	ENSMOCG00000012649	Mrpl46	84	33.468	Microtus_ochrogaster
ENSCSAVG00000000559	-	82	32.677	ENSMMOG00000015783	mrpl46	81	33.068	Mola_mola
ENSCSAVG00000000559	-	76	33.913	ENSMODG00000019591	MRPL46	76	35.043	Monodelphis_domestica
ENSCSAVG00000000559	-	94	33.333	ENSMALG00000012231	mrpl46	92	33.333	Monopterus_albus
ENSCSAVG00000000559	-	86	33.984	MGP_CAROLIEiJ_G0029869	Mrpl46	88	33.984	Mus_caroli
ENSCSAVG00000000559	-	80	33.613	ENSMUSG00000030612	Mrpl46	83	34.016	Mus_musculus
ENSCSAVG00000000559	-	80	33.193	MGP_PahariEiJ_G0013091	Mrpl46	85	33.607	Mus_pahari
ENSCSAVG00000000559	-	80	34.034	MGP_SPRETEiJ_G0030971	Mrpl46	83	34.426	Mus_spretus
ENSCSAVG00000000559	-	82	33.865	ENSMPUG00000015828	MRPL46	84	33.865	Mustela_putorius_furo
ENSCSAVG00000000559	-	82	34.426	ENSMLUG00000009624	MRPL46	84	34.426	Myotis_lucifugus
ENSCSAVG00000000559	-	84	33.203	ENSNGAG00000015215	Mrpl46	86	33.203	Nannospalax_galili
ENSCSAVG00000000559	-	84	32.296	ENSNBRG00000006597	mrpl46	83	32.677	Neolamprologus_brichardi
ENSCSAVG00000000559	-	82	33.871	ENSNLEG00000011430	MRPL46	84	33.871	Nomascus_leucogenys
ENSCSAVG00000000559	-	82	33.333	ENSOPRG00000008241	MRPL46	84	33.333	Ochotona_princeps
ENSCSAVG00000000559	-	82	32.661	ENSODEG00000015622	MRPL46	83	32.661	Octodon_degus
ENSCSAVG00000000559	-	84	31.907	ENSONIG00000003015	mrpl46	82	32.283	Oreochromis_niloticus
ENSCSAVG00000000559	-	84	33.463	ENSOCUG00000001362	MRPL46	87	33.463	Oryctolagus_cuniculus
ENSCSAVG00000000559	-	93	31.399	ENSORLG00000014585	mrpl46	96	31.399	Oryzias_latipes
ENSCSAVG00000000559	-	93	31.399	ENSORLG00020001089	mrpl46	96	31.399	Oryzias_latipes_hni
ENSCSAVG00000000559	-	82	32.661	ENSORLG00015017107	mrpl46	81	32.661	Oryzias_latipes_hsok
ENSCSAVG00000000559	-	82	34.274	ENSOMEG00000017928	mrpl46	80	34.274	Oryzias_melastigma
ENSCSAVG00000000559	-	85	32.283	ENSOGAG00000004736	MRPL46	86	32.283	Otolemur_garnettii
ENSCSAVG00000000559	-	82	34.818	ENSOARG00000010876	MRPL46	84	34.818	Ovis_aries
ENSCSAVG00000000559	-	82	34.274	ENSPPAG00000040630	MRPL46	84	34.274	Pan_paniscus
ENSCSAVG00000000559	-	82	34.677	ENSPPRG00000002180	MRPL46	84	34.677	Panthera_pardus
ENSCSAVG00000000559	-	78	35.169	ENSPTIG00000020791	MRPL46	85	35.169	Panthera_tigris_altaica
ENSCSAVG00000000559	-	82	34.274	ENSPTRG00000007419	MRPL46	84	34.274	Pan_troglodytes
ENSCSAVG00000000559	-	82	32.787	ENSPANG00000000922	MRPL46	84	34.677	Papio_anubis
ENSCSAVG00000000559	-	91	32.234	ENSPKIG00000014232	mrpl46	85	32.847	Paramormyrops_kingsleyae
ENSCSAVG00000000559	-	82	32.530	ENSPMGG00000023145	mrpl46	81	32.530	Periophthalmus_magnuspinnatus
ENSCSAVG00000000559	-	82	34.677	ENSPEMG00000018885	Mrpl46	84	34.677	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000559	-	84	36.502	ENSPMAG00000008138	mrpl46	87	36.398	Petromyzon_marinus
ENSCSAVG00000000559	-	81	32.271	ENSPCIG00000006388	MRPL46	78	34.263	Phascolarctos_cinereus
ENSCSAVG00000000559	-	81	36.327	ENSPFOG00000017386	mrpl46	80	36.327	Poecilia_formosa
ENSCSAVG00000000559	-	81	36.327	ENSPLAG00000001299	mrpl46	80	36.327	Poecilia_latipinna
ENSCSAVG00000000559	-	84	35.178	ENSPMEG00000012447	mrpl46	83	35.178	Poecilia_mexicana
ENSCSAVG00000000559	-	81	35.510	ENSPREG00000005001	mrpl46	80	35.510	Poecilia_reticulata
ENSCSAVG00000000559	-	82	34.274	ENSPPYG00000006750	MRPL46	84	34.274	Pongo_abelii
ENSCSAVG00000000559	-	82	33.197	ENSPCAG00000003010	MRPL46	87	34.109	Procavia_capensis
ENSCSAVG00000000559	-	82	34.694	ENSPCOG00000014191	MRPL46	84	34.694	Propithecus_coquereli
ENSCSAVG00000000559	-	70	35.514	ENSPVAG00000001593	MRPL46	99	35.514	Pteropus_vampyrus
ENSCSAVG00000000559	-	84	32.157	ENSPNYG00000008444	mrpl46	83	33.071	Pundamilia_nyererei
ENSCSAVG00000000559	-	96	32.759	ENSPNAG00000013468	mrpl46	91	32.759	Pygocentrus_nattereri
ENSCSAVG00000000559	-	82	35.102	ENSRNOG00000018547	Mrpl46	84	35.102	Rattus_norvegicus
ENSCSAVG00000000559	-	82	35.081	ENSRBIG00000041366	MRPL46	87	34.496	Rhinopithecus_bieti
ENSCSAVG00000000559	-	82	34.677	ENSRROG00000025867	MRPL46	77	34.109	Rhinopithecus_roxellana
ENSCSAVG00000000559	-	82	32.787	ENSSBOG00000032094	-	79	32.787	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000559	-	82	30.864	ENSSBOG00000034438	-	85	30.864	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000559	-	56	34.911	ENSSHAG00000018436	MRPL46	98	32.569	Sarcophilus_harrisii
ENSCSAVG00000000559	-	81	31.967	ENSSFOG00015018980	mrpl46	88	32.653	Scleropages_formosus
ENSCSAVG00000000559	-	84	32.819	ENSSMAG00000010974	mrpl46	83	33.205	Scophthalmus_maximus
ENSCSAVG00000000559	-	83	33.730	ENSSDUG00000008387	mrpl46	82	34.127	Seriola_dumerili
ENSCSAVG00000000559	-	83	34.524	ENSSLDG00000015671	mrpl46	82	34.524	Seriola_lalandi_dorsalis
ENSCSAVG00000000559	-	83	35.060	ENSSPAG00000017096	mrpl46	82	35.060	Stegastes_partitus
ENSCSAVG00000000559	-	81	33.058	ENSSSCG00000005105	MRPL46	84	33.607	Sus_scrofa
ENSCSAVG00000000559	-	81	35.102	ENSTGUG00000008361	-	97	35.102	Taeniopygia_guttata
ENSCSAVG00000000559	-	81	35.510	ENSTGUG00000015561	-	97	35.510	Taeniopygia_guttata
ENSCSAVG00000000559	-	82	35.484	ENSTRUG00000023585	mrpl46	79	35.484	Takifugu_rubripes
ENSCSAVG00000000559	-	82	35.887	ENSTNIG00000011910	mrpl46	85	35.887	Tetraodon_nigroviridis
ENSCSAVG00000000559	-	72	32.558	ENSTBEG00000009495	MRPL46	84	32.558	Tupaia_belangeri
ENSCSAVG00000000559	-	81	35.081	ENSTTRG00000008690	MRPL46	88	35.000	Tursiops_truncatus
ENSCSAVG00000000559	-	85	34.496	ENSUAMG00000019058	MRPL46	88	34.496	Ursus_americanus
ENSCSAVG00000000559	-	85	34.615	ENSUMAG00000006255	MRPL46	88	34.615	Ursus_maritimus
ENSCSAVG00000000559	-	80	34.583	ENSVPAG00000004712	MRPL46	99	34.583	Vicugna_pacos
ENSCSAVG00000000559	-	94	32.517	ENSVVUG00000012054	MRPL46	96	32.517	Vulpes_vulpes
ENSCSAVG00000000559	-	96	30.903	ENSXETG00000007594	mrpl46	90	30.903	Xenopus_tropicalis
ENSCSAVG00000000559	-	84	33.597	ENSXCOG00000018106	mrpl46	83	33.597	Xiphophorus_couchianus
ENSCSAVG00000000559	-	84	33.992	ENSXMAG00000018093	mrpl46	83	33.992	Xiphophorus_maculatus