EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000000649 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 6213 bases
Position: chrreftig_249:234654-240866
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	1	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	2	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	3	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	4	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	5	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	6	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	7	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	8	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	9	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	10	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	11	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	12	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	13	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	14	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	15	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	16	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	17	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	18	19
ENSCSAVP00000001157	zf-C2H2	PF00096.26	2.8e-102	19	19
ENSCSAVP00000001157	zf-met	PF12874.7	3.7e-44	1	7
ENSCSAVP00000001157	zf-met	PF12874.7	3.7e-44	2	7
ENSCSAVP00000001157	zf-met	PF12874.7	3.7e-44	3	7
ENSCSAVP00000001157	zf-met	PF12874.7	3.7e-44	4	7
ENSCSAVP00000001157	zf-met	PF12874.7	3.7e-44	5	7
ENSCSAVP00000001157	zf-met	PF12874.7	3.7e-44	6	7
ENSCSAVP00000001157	zf-met	PF12874.7	3.7e-44	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001170	-	1701	-	ENSCSAVP00000001157	567 (aa)	-	H2Y759

Gene Model

Click here to download ENSCSAVG00000000649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000000649	-	99	82.103	ENSCSAVG00000000655	-	100	82.103
ENSCSAVG00000000649	-	99	35.294	ENSCSAVG00000009217	-	99	36.059
ENSCSAVG00000000649	-	100	37.383	ENSCSAVG00000011749	-	85	37.383
ENSCSAVG00000000649	-	99	75.735	ENSCSAVG00000000690	-	98	75.735
ENSCSAVG00000000649	-	98	42.593	ENSCSAVG00000006650	-	99	41.341
ENSCSAVG00000000649	-	99	41.176	ENSCSAVG00000009819	-	73	41.176
ENSCSAVG00000000649	-	97	42.105	ENSCSAVG00000006028	-	69	42.105
ENSCSAVG00000000649	-	99	59.615	ENSCSAVG00000009583	-	99	59.792
ENSCSAVG00000000649	-	99	54.762	ENSCSAVG00000010960	-	100	54.122
ENSCSAVG00000000649	-	99	48.014	ENSCSAVG00000010156	-	97	48.014
ENSCSAVG00000000649	-	99	32.267	ENSCSAVG00000005896	-	68	32.700
ENSCSAVG00000000649	-	99	49.113	ENSCSAVG00000007589	-	100	49.113
ENSCSAVG00000000649	-	59	43.333	ENSCSAVG00000006755	-	96	43.333
ENSCSAVG00000000649	-	99	48.878	ENSCSAVG00000004678	-	99	49.711
ENSCSAVG00000000649	-	99	41.558	ENSCSAVG00000005904	-	97	41.558
ENSCSAVG00000000649	-	99	40.690	ENSCSAVG00000009739	-	65	40.690
ENSCSAVG00000000649	-	99	58.286	ENSCSAVG00000001808	-	100	58.286
ENSCSAVG00000000649	-	99	78.146	ENSCSAVG00000000642	-	100	78.146
ENSCSAVG00000000649	-	98	60.714	ENSCSAVG00000003690	-	99	60.714
ENSCSAVG00000000649	-	99	52.182	ENSCSAVG00000006141	-	100	52.182
ENSCSAVG00000000649	-	99	61.250	ENSCSAVG00000001989	-	100	61.250
ENSCSAVG00000000649	-	99	48.182	ENSCSAVG00000003895	-	100	48.182
ENSCSAVG00000000649	-	99	48.000	ENSCSAVG00000001949	-	98	48.000
ENSCSAVG00000000649	-	99	59.615	ENSCSAVG00000006608	-	100	52.456
ENSCSAVG00000000649	-	99	80.000	ENSCSAVG00000008862	-	99	80.000
ENSCSAVG00000000649	-	99	56.855	ENSCSAVG00000000520	-	100	56.855
ENSCSAVG00000000649	-	99	57.059	ENSCSAVG00000000293	-	100	57.059
ENSCSAVG00000000649	-	99	62.532	ENSCSAVG00000007918	-	100	62.170
ENSCSAVG00000000649	-	99	44.944	ENSCSAVG00000011146	-	83	44.944
ENSCSAVG00000000649	-	99	59.429	ENSCSAVG00000004762	-	100	59.429
ENSCSAVG00000000649	-	99	43.750	ENSCSAVG00000004543	-	100	37.168
ENSCSAVG00000000649	-	98	35.263	ENSCSAVG00000006745	-	98	33.107
ENSCSAVG00000000649	-	99	66.845	ENSCSAVG00000004703	-	100	68.182
ENSCSAVG00000000649	-	99	62.799	ENSCSAVG00000004499	-	100	62.799
ENSCSAVG00000000649	-	99	33.077	ENSCSAVG00000006729	-	69	33.077
ENSCSAVG00000000649	-	99	61.111	ENSCSAVG00000002179	-	100	61.111
ENSCSAVG00000000649	-	99	61.520	ENSCSAVG00000009953	-	96	61.520
ENSCSAVG00000000649	-	99	45.433	ENSCSAVG00000009574	-	99	45.433
ENSCSAVG00000000649	-	99	68.354	ENSCSAVG00000001830	-	99	68.354
ENSCSAVG00000000649	-	99	64.919	ENSCSAVG00000001834	-	100	64.919
ENSCSAVG00000000649	-	99	64.057	ENSCSAVG00000000673	-	100	64.057

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000649	-	99	49.746	ENSG00000198482	ZNF808	87	49.746	Homo_sapiens
ENSCSAVG00000000649	-	99	46.881	ENSAMEG00000014454	-	100	46.881	Ailuropoda_melanoleuca
ENSCSAVG00000000649	-	99	44.348	ENSACIG00000015429	-	91	53.704	Amphilophus_citrinellus
ENSCSAVG00000000649	-	99	46.881	ENSACAG00000013039	-	99	46.953	Anolis_carolinensis
ENSCSAVG00000000649	-	99	43.706	ENSACAG00000025611	-	66	43.607	Anolis_carolinensis
ENSCSAVG00000000649	-	100	45.631	ENSACAG00000029487	-	77	45.631	Anolis_carolinensis
ENSCSAVG00000000649	-	99	46.305	ENSACLG00000019318	-	97	40.833	Astatotilapia_calliptera
ENSCSAVG00000000649	-	99	44.488	ENSACLG00000017576	-	87	44.488	Astatotilapia_calliptera
ENSCSAVG00000000649	-	99	45.203	ENSAMXG00000012604	-	97	45.203	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	48.534	ENSAMXG00000038280	-	94	48.071	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	48.673	ENSAMXG00000031496	-	89	48.673	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	52.542	ENSAMXG00000041721	-	80	52.542	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	52.273	ENSAMXG00000030530	-	98	52.273	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	53.668	ENSAMXG00000042938	-	91	53.668	Astyanax_mexicanus
ENSCSAVG00000000649	-	100	55.072	ENSAMXG00000036762	-	97	55.072	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	55.762	ENSAMXG00000025965	-	95	55.762	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	51.397	ENSAMXG00000029828	-	99	51.397	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	55.634	ENSAMXG00000018161	-	96	55.634	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	46.325	ENSAMXG00000009563	-	94	46.325	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	57.143	ENSAMXG00000041861	-	84	57.143	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	48.142	ENSAMXG00000037717	-	97	48.142	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	54.062	ENSAMXG00000033500	-	97	54.062	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	51.370	ENSAMXG00000031900	-	94	51.370	Astyanax_mexicanus
ENSCSAVG00000000649	-	99	45.752	ENSBTAG00000030470	-	70	45.752	Bos_taurus
ENSCSAVG00000000649	-	99	45.016	ENSBTAG00000050322	-	77	44.099	Bos_taurus
ENSCSAVG00000000649	-	99	45.455	ENSCHIG00000020931	-	81	45.574	Capra_hircus
ENSCSAVG00000000649	-	99	48.936	ENSCATG00000036940	ZNF808	81	48.936	Cercocebus_atys
ENSCSAVG00000000649	-	99	48.582	ENSCSAG00000001974	ZNF808	86	48.582	Chlorocebus_sabaeus
ENSCSAVG00000000649	-	99	49.518	ENSCPBG00000003774	-	95	46.845	Chrysemys_picta_bellii
ENSCSAVG00000000649	-	99	50.000	ENSCPBG00000015500	-	89	50.000	Chrysemys_picta_bellii
ENSCSAVG00000000649	-	99	45.178	ENSCPBG00000017489	-	94	46.538	Chrysemys_picta_bellii
ENSCSAVG00000000649	-	99	48.659	ENSCPBG00000003130	-	98	47.492	Chrysemys_picta_bellii
ENSCSAVG00000000649	-	99	45.763	ENSCING00000024509	-	90	45.763	Ciona_intestinalis
ENSCSAVG00000000649	-	99	49.020	ENSCANG00000019002	ZNF808	80	49.020	Colobus_angolensis_palliatus
ENSCSAVG00000000649	-	99	46.283	ENSCGRG00001012523	-	99	46.283	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000649	-	99	50.000	ENSCGRG00001011966	Zfp715	69	50.000	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000649	-	99	50.000	ENSCGRG00000013626	Zfp715	66	50.000	Cricetulus_griseus_crigri
ENSCSAVG00000000649	-	99	49.813	ENSEBUG00000014648	-	77	49.732	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	47.348	ENSEBUG00000003455	-	79	47.348	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	46.682	ENSEBUG00000006249	-	86	46.682	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	43.711	ENSEBUG00000006987	-	97	43.711	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	36.243	ENSEBUG00000006129	-	79	35.619	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	44.920	ENSEBUG00000014597	-	82	44.920	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	53.906	ENSEBUG00000008903	-	78	53.906	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	42.982	ENSEBUG00000014542	-	71	42.982	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	47.967	ENSEBUG00000001972	-	77	47.276	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	44.056	ENSEBUG00000005012	-	61	44.056	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	48.252	ENSEBUG00000009909	-	81	48.252	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	49.746	ENSEBUG00000005703	-	86	51.607	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	47.253	ENSEBUG00000010472	-	75	46.289	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	39.855	ENSEBUG00000003078	-	73	39.855	Eptatretus_burgeri
ENSCSAVG00000000649	-	99	42.282	ENSGAFG00000017066	-	64	42.282	Gambusia_affinis
ENSCSAVG00000000649	-	99	43.974	ENSGAGG00000017094	-	55	43.974	Gopherus_agassizii
ENSCSAVG00000000649	-	99	47.308	ENSGAGG00000002828	-	74	47.308	Gopherus_agassizii
ENSCSAVG00000000649	-	99	45.984	ENSGAGG00000001469	-	91	45.984	Gopherus_agassizii
ENSCSAVG00000000649	-	100	50.534	ENSGAGG00000006323	-	95	49.376	Gopherus_agassizii
ENSCSAVG00000000649	-	99	49.223	ENSGAGG00000014389	-	96	48.128	Gopherus_agassizii
ENSCSAVG00000000649	-	99	49.376	ENSGGOG00000003352	ZNF808	80	49.376	Gorilla_gorilla
ENSCSAVG00000000649	-	99	46.939	ENSHBUG00000001075	-	97	43.158	Haplochromis_burtoni
ENSCSAVG00000000649	-	99	44.009	ENSLACG00000014708	-	81	45.244	Latimeria_chalumnae
ENSCSAVG00000000649	-	99	48.936	ENSMFAG00000007422	ZNF808	82	48.936	Macaca_fascicularis
ENSCSAVG00000000649	-	99	48.936	ENSMMUG00000012083	ZNF808	82	48.936	Macaca_mulatta
ENSCSAVG00000000649	-	99	48.936	ENSMNEG00000043562	ZNF808	82	48.936	Macaca_nemestrina
ENSCSAVG00000000649	-	99	48.985	ENSMLEG00000038043	ZNF808	73	48.985	Mandrillus_leucophaeus
ENSCSAVG00000000649	-	99	48.619	ENSMZEG00005021865	-	93	46.203	Maylandia_zebra
ENSCSAVG00000000649	-	99	47.788	ENSMZEG00005025012	-	99	44.970	Maylandia_zebra
ENSCSAVG00000000649	-	99	49.505	ENSMICG00000042544	-	86	46.221	Microcebus_murinus
ENSCSAVG00000000649	-	99	46.584	ENSMODG00000018622	-	96	46.584	Monodelphis_domestica
ENSCSAVG00000000649	-	99	47.324	MGP_CAROLIEiJ_G0029490	Zfp420	99	47.324	Mus_caroli
ENSCSAVG00000000649	-	99	51.010	MGP_CAROLIEiJ_G0029614	Zfp715	61	51.010	Mus_caroli
ENSCSAVG00000000649	-	99	43.363	MGP_CAROLIEiJ_G0029427	-	88	43.363	Mus_caroli
ENSCSAVG00000000649	-	99	49.376	MGP_CAROLIEiJ_G0021128	Zfp51	83	49.376	Mus_caroli
ENSCSAVG00000000649	-	99	47.606	ENSMUSG00000058402	Zfp420	99	47.606	Mus_musculus
ENSCSAVG00000000649	-	100	48.336	ENSMUSG00000023892	Zfp51	83	48.336	Mus_musculus
ENSCSAVG00000000649	-	99	51.010	ENSMUSG00000012640	Zfp715	61	51.010	Mus_musculus
ENSCSAVG00000000649	-	99	41.558	ENSMUSG00000070709	Zfp974	88	41.558	Mus_musculus
ENSCSAVG00000000649	-	99	49.020	MGP_PahariEiJ_G0023447	Zfp51	88	49.020	Mus_pahari
ENSCSAVG00000000649	-	99	47.887	MGP_PahariEiJ_G0012724	Zfp420	99	47.887	Mus_pahari
ENSCSAVG00000000649	-	99	42.194	MGP_PahariEiJ_G0012663	-	76	42.194	Mus_pahari
ENSCSAVG00000000649	-	99	51.010	MGP_SPRETEiJ_G0030713	Zfp715	61	51.010	Mus_spretus
ENSCSAVG00000000649	-	99	47.606	MGP_SPRETEiJ_G0030586	Zfp420	99	47.606	Mus_spretus
ENSCSAVG00000000649	-	99	44.589	MGP_SPRETEiJ_G0030526	-	87	44.589	Mus_spretus
ENSCSAVG00000000649	-	99	41.687	MGP_SPRETEiJ_G0030525	-	84	41.687	Mus_spretus
ENSCSAVG00000000649	-	99	41.549	ENSMLUG00000009276	-	90	41.549	Myotis_lucifugus
ENSCSAVG00000000649	-	99	46.009	ENSMLUG00000015757	-	96	45.455	Myotis_lucifugus
ENSCSAVG00000000649	-	99	48.841	ENSNLEG00000006042	ZNF808	76	48.841	Nomascus_leucogenys
ENSCSAVG00000000649	-	99	41.895	ENSONIG00000016979	-	95	43.353	Oreochromis_niloticus
ENSCSAVG00000000649	-	99	47.887	ENSONIG00000007396	-	99	47.887	Oreochromis_niloticus
ENSCSAVG00000000649	-	99	44.471	ENSORLG00000011040	-	86	44.471	Oryzias_latipes
ENSCSAVG00000000649	-	99	41.827	ENSOMEG00000001622	-	91	41.827	Oryzias_melastigma
ENSCSAVG00000000649	-	99	40.870	ENSOMEG00000018871	-	65	40.870	Oryzias_melastigma
ENSCSAVG00000000649	-	99	45.077	ENSOARG00000002896	-	86	45.077	Ovis_aries
ENSCSAVG00000000649	-	99	49.198	ENSPPAG00000038086	ZNF808	80	49.198	Pan_paniscus
ENSCSAVG00000000649	-	99	49.113	ENSPANG00000011361	ZNF808	81	49.113	Papio_anubis
ENSCSAVG00000000649	-	99	41.483	ENSPSIG00000008588	-	100	41.483	Pelodiscus_sinensis
ENSCSAVG00000000649	-	99	47.250	ENSPSIG00000009603	-	98	47.250	Pelodiscus_sinensis
ENSCSAVG00000000649	-	100	49.907	ENSPEMG00000000548	-	86	49.907	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000649	-	99	50.442	ENSPCIG00000018929	-	94	46.168	Phascolarctos_cinereus
ENSCSAVG00000000649	-	99	44.970	ENSPLAG00000014660	-	84	43.922	Poecilia_latipinna
ENSCSAVG00000000649	-	99	46.667	ENSPREG00000008826	-	94	46.667	Poecilia_reticulata
ENSCSAVG00000000649	-	99	48.841	ENSPPYG00000029644	ZNF808	80	48.841	Pongo_abelii
ENSCSAVG00000000649	-	99	47.750	ENSPVAG00000009433	-	98	47.750	Pteropus_vampyrus
ENSCSAVG00000000649	-	100	48.768	ENSPNAG00000021831	-	98	50.418	Pygocentrus_nattereri
ENSCSAVG00000000649	-	99	50.269	ENSPNAG00000016478	-	99	50.269	Pygocentrus_nattereri
ENSCSAVG00000000649	-	99	53.208	ENSPNAG00000012154	-	88	53.208	Pygocentrus_nattereri
ENSCSAVG00000000649	-	99	44.297	ENSPNAG00000002244	-	85	44.216	Pygocentrus_nattereri
ENSCSAVG00000000649	-	99	47.595	ENSPNAG00000012495	-	79	47.315	Pygocentrus_nattereri
ENSCSAVG00000000649	-	100	52.326	ENSPNAG00000005829	-	97	48.682	Pygocentrus_nattereri
ENSCSAVG00000000649	-	99	48.454	ENSPNAG00000006039	-	88	48.454	Pygocentrus_nattereri
ENSCSAVG00000000649	-	99	50.187	ENSRNOG00000043341	Zfp51	85	50.187	Rattus_norvegicus
ENSCSAVG00000000649	-	99	49.064	ENSRBIG00000032168	-	82	48.649	Rhinopithecus_bieti
ENSCSAVG00000000649	-	99	48.841	ENSRROG00000009467	ZNF808	80	48.841	Rhinopithecus_roxellana
ENSCSAVG00000000649	-	99	42.934	ENSSHAG00000003090	-	89	42.934	Sarcophilus_harrisii
ENSCSAVG00000000649	-	99	42.408	ENSSLDG00000016301	-	89	42.408	Seriola_lalandi_dorsalis
ENSCSAVG00000000649	-	99	46.018	ENSSPUG00000018867	-	95	46.018	Sphenodon_punctatus
ENSCSAVG00000000649	-	99	46.588	ENSSPUG00000000136	-	91	46.588	Sphenodon_punctatus
ENSCSAVG00000000649	-	99	46.582	ENSSPUG00000009764	-	63	46.582	Sphenodon_punctatus
ENSCSAVG00000000649	-	99	48.669	ENSSPUG00000000229	-	97	48.315	Sphenodon_punctatus
ENSCSAVG00000000649	-	99	48.077	ENSSPUG00000009898	-	94	48.016	Sphenodon_punctatus
ENSCSAVG00000000649	-	99	44.351	ENSTGUG00000014079	-	100	44.142	Taeniopygia_guttata
ENSCSAVG00000000649	-	99	46.821	ENSTNIG00000005023	-	100	46.821	Tetraodon_nigroviridis
ENSCSAVG00000000649	-	99	37.563	ENSTNIG00000008100	-	99	36.461	Tetraodon_nigroviridis
ENSCSAVG00000000649	-	99	44.144	ENSTBEG00000016262	-	100	44.144	Tupaia_belangeri
ENSCSAVG00000000649	-	99	46.207	ENSUMAG00000024602	-	96	42.902	Ursus_maritimus
ENSCSAVG00000000649	-	100	44.484	ENSXETG00000016781	-	100	46.154	Xenopus_tropicalis