EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000698 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2016 bases
Position: chrreftig_55:548810-550825
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001254	S4	PF01479.25	1.3e-09	1	1
ENSCSAVP00000001254	Ribosomal_S4	PF00163.19	8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001269	-	912	-	ENSCSAVP00000001254	181 (aa)	-	H2Y7F6

Gene Model

Click here to download ENSCSAVG00000000698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000698	-	100	66.851	ENSAPOG00000014720	imp3	99	66.851	Acanthochromis_polyacanthus
ENSCSAVG00000000698	-	99	64.088	ENSAMEG00000019247	IMP3	98	64.088	Ailuropoda_melanoleuca
ENSCSAVG00000000698	-	98	66.854	ENSACIG00000022070	imp3	95	66.854	Amphilophus_citrinellus
ENSCSAVG00000000698	-	100	67.956	ENSAOCG00000015761	imp3	99	67.956	Amphiprion_ocellaris
ENSCSAVG00000000698	-	100	67.403	ENSAPEG00000005250	imp3	99	67.403	Amphiprion_percula
ENSCSAVG00000000698	-	100	67.956	ENSATEG00000020021	imp3	99	67.956	Anabas_testudineus
ENSCSAVG00000000698	-	100	58.378	ENSACAG00000016259	IMP3	99	58.378	Anolis_carolinensis
ENSCSAVG00000000698	-	99	62.983	ENSANAG00000016669	-	98	62.983	Aotus_nancymaae
ENSCSAVG00000000698	-	99	53.591	ENSANAG00000036874	-	98	53.591	Aotus_nancymaae
ENSCSAVG00000000698	-	100	67.956	ENSACLG00000009929	imp3	99	67.956	Astatotilapia_calliptera
ENSCSAVG00000000698	-	96	66.667	ENSAMXG00000018715	imp3	99	66.667	Astyanax_mexicanus
ENSCSAVG00000000698	-	100	48.619	WBGene00016740	C48B6.2	99	48.619	Caenorhabditis_elegans
ENSCSAVG00000000698	-	99	62.983	ENSCJAG00000044585	IMP3	98	62.983	Callithrix_jacchus
ENSCSAVG00000000698	-	99	63.536	ENSCAFG00000018039	IMP3	81	63.536	Canis_familiaris
ENSCSAVG00000000698	-	99	49.724	ENSCAFG00020006737	-	98	49.468	Canis_lupus_dingo
ENSCSAVG00000000698	-	99	63.536	ENSCAFG00020003760	-	98	63.536	Canis_lupus_dingo
ENSCSAVG00000000698	-	99	63.536	ENSCHIG00000006295	IMP3	98	63.536	Capra_hircus
ENSCSAVG00000000698	-	99	63.536	ENSTSYG00000005503	IMP3	98	63.536	Carlito_syrichta
ENSCSAVG00000000698	-	99	62.983	ENSCPOG00000012016	IMP3	98	62.983	Cavia_porcellus
ENSCSAVG00000000698	-	99	55.000	ENSCCAG00000023378	-	99	54.023	Cebus_capucinus
ENSCSAVG00000000698	-	99	62.983	ENSCCAG00000002712	-	98	62.983	Cebus_capucinus
ENSCSAVG00000000698	-	99	62.983	ENSCATG00000015188	IMP3	98	62.983	Cercocebus_atys
ENSCSAVG00000000698	-	99	62.983	ENSCSAG00000019732	IMP3	98	62.983	Chlorocebus_sabaeus
ENSCSAVG00000000698	-	99	63.536	ENSCHOG00000012046	IMP3	98	63.536	Choloepus_hoffmanni
ENSCSAVG00000000698	-	100	57.923	ENSCPBG00000021662	IMP3	99	57.923	Chrysemys_picta_bellii
ENSCSAVG00000000698	-	100	87.293	ENSCING00000004233	-	100	87.293	Ciona_intestinalis
ENSCSAVG00000000698	-	99	62.983	ENSCANG00000018342	IMP3	98	62.983	Colobus_angolensis_palliatus
ENSCSAVG00000000698	-	99	61.878	ENSCGRG00001001326	Imp3	98	61.878	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000698	-	99	61.878	ENSCGRG00000018907	Imp3	98	61.878	Cricetulus_griseus_crigri
ENSCSAVG00000000698	-	100	67.403	ENSCSEG00000017200	imp3	99	67.403	Cynoglossus_semilaevis
ENSCSAVG00000000698	-	100	61.749	ENSCVAG00000019511	imp3	99	61.749	Cyprinodon_variegatus
ENSCSAVG00000000698	-	100	65.193	ENSDARG00000115266	imp3	99	65.476	Danio_rerio
ENSCSAVG00000000698	-	99	63.536	ENSDNOG00000015787	IMP3	80	63.536	Dasypus_novemcinctus
ENSCSAVG00000000698	-	99	61.878	ENSDORG00000029301	Imp3	98	61.878	Dipodomys_ordii
ENSCSAVG00000000698	-	98	57.865	FBgn0034232	CG4866	98	57.865	Drosophila_melanogaster
ENSCSAVG00000000698	-	99	62.983	ENSETEG00000004278	IMP3	98	62.983	Echinops_telfairi
ENSCSAVG00000000698	-	99	61.111	ENSEBUG00000002343	imp3	99	61.111	Eptatretus_burgeri
ENSCSAVG00000000698	-	99	62.983	ENSEASG00005015693	IMP3	98	62.983	Equus_asinus_asinus
ENSCSAVG00000000698	-	99	63.536	ENSECAG00000015786	IMP3	98	63.536	Equus_caballus
ENSCSAVG00000000698	-	100	70.166	ENSELUG00000023264	imp3	99	70.166	Esox_lucius
ENSCSAVG00000000698	-	99	63.536	ENSFCAG00000040328	IMP3	98	63.536	Felis_catus
ENSCSAVG00000000698	-	71	50.769	ENSFALG00000014811	IMP3	98	53.077	Ficedula_albicollis
ENSCSAVG00000000698	-	99	62.983	ENSFDAG00000018422	IMP3	98	62.983	Fukomys_damarensis
ENSCSAVG00000000698	-	100	67.403	ENSFHEG00000016954	imp3	99	67.403	Fundulus_heteroclitus
ENSCSAVG00000000698	-	100	66.851	ENSGMOG00000018162	imp3	99	66.851	Gadus_morhua
ENSCSAVG00000000698	-	100	51.913	ENSGALG00000040238	IMP3	99	53.552	Gallus_gallus
ENSCSAVG00000000698	-	100	66.851	ENSGAFG00000007425	imp3	99	66.851	Gambusia_affinis
ENSCSAVG00000000698	-	100	69.613	ENSGACG00000015998	imp3	99	69.613	Gasterosteus_aculeatus
ENSCSAVG00000000698	-	100	57.923	ENSGAGG00000008163	IMP3	99	57.923	Gopherus_agassizii
ENSCSAVG00000000698	-	99	62.983	ENSGGOG00000025122	IMP3	98	62.983	Gorilla_gorilla
ENSCSAVG00000000698	-	100	67.956	ENSHBUG00000018453	imp3	99	67.956	Haplochromis_burtoni
ENSCSAVG00000000698	-	99	62.431	ENSHGLG00000019824	IMP3	98	62.431	Heterocephalus_glaber_female
ENSCSAVG00000000698	-	99	62.431	ENSHGLG00100020660	IMP3	98	62.431	Heterocephalus_glaber_male
ENSCSAVG00000000698	-	99	66.667	ENSHCOG00000020565	imp3	98	66.667	Hippocampus_comes
ENSCSAVG00000000698	-	100	68.508	ENSIPUG00000013142	imp3	99	68.508	Ictalurus_punctatus
ENSCSAVG00000000698	-	99	64.088	ENSSTOG00000030143	IMP3	98	64.088	Ictidomys_tridecemlineatus
ENSCSAVG00000000698	-	100	68.508	ENSKMAG00000001956	imp3	99	68.508	Kryptolebias_marmoratus
ENSCSAVG00000000698	-	100	67.956	ENSLBEG00000008178	imp3	99	67.956	Labrus_bergylta
ENSCSAVG00000000698	-	99	67.778	ENSLACG00000022148	imp3	98	67.778	Latimeria_chalumnae
ENSCSAVG00000000698	-	100	66.851	ENSLOCG00000010237	imp3	99	66.851	Lepisosteus_oculatus
ENSCSAVG00000000698	-	99	63.536	ENSLAFG00000004425	IMP3	98	63.536	Loxodonta_africana
ENSCSAVG00000000698	-	99	62.983	ENSMFAG00000008867	IMP3	98	62.983	Macaca_fascicularis
ENSCSAVG00000000698	-	99	62.983	ENSMMUG00000016103	IMP3	98	62.983	Macaca_mulatta
ENSCSAVG00000000698	-	99	62.983	ENSMNEG00000026328	IMP3	98	62.983	Macaca_nemestrina
ENSCSAVG00000000698	-	100	67.403	ENSMAMG00000003215	imp3	99	67.403	Mastacembelus_armatus
ENSCSAVG00000000698	-	100	67.956	ENSMZEG00005005544	imp3	99	67.956	Maylandia_zebra
ENSCSAVG00000000698	-	99	62.431	ENSMAUG00000010279	Imp3	98	62.431	Mesocricetus_auratus
ENSCSAVG00000000698	-	99	63.536	ENSMICG00000044149	IMP3	98	63.536	Microcebus_murinus
ENSCSAVG00000000698	-	99	62.983	ENSMOCG00000008647	Imp3	98	62.983	Microtus_ochrogaster
ENSCSAVG00000000698	-	96	66.092	ENSMMOG00000018117	imp3	83	66.092	Mola_mola
ENSCSAVG00000000698	-	99	63.536	ENSMODG00000025193	IMP3	98	63.536	Monodelphis_domestica
ENSCSAVG00000000698	-	100	68.508	ENSMALG00000006505	imp3	99	68.508	Monopterus_albus
ENSCSAVG00000000698	-	99	62.431	MGP_CAROLIEiJ_G0032258	Imp3	98	62.431	Mus_caroli
ENSCSAVG00000000698	-	99	62.983	ENSMUSG00000032288	Imp3	98	62.983	Mus_musculus
ENSCSAVG00000000698	-	99	62.431	MGP_PahariEiJ_G0015125	Imp3	98	62.431	Mus_pahari
ENSCSAVG00000000698	-	99	62.983	MGP_SPRETEiJ_G0033398	Imp3	98	62.983	Mus_spretus
ENSCSAVG00000000698	-	99	64.088	ENSMPUG00000020147	IMP3	98	64.088	Mustela_putorius_furo
ENSCSAVG00000000698	-	99	63.536	ENSMLUG00000014032	IMP3	98	63.536	Myotis_lucifugus
ENSCSAVG00000000698	-	99	61.878	ENSNGAG00000017248	Imp3	98	61.878	Nannospalax_galili
ENSCSAVG00000000698	-	100	67.956	ENSNBRG00000004060	imp3	99	67.956	Neolamprologus_brichardi
ENSCSAVG00000000698	-	99	64.088	ENSOPRG00000015906	-	98	64.088	Ochotona_princeps
ENSCSAVG00000000698	-	99	62.983	ENSODEG00000020194	IMP3	98	62.983	Octodon_degus
ENSCSAVG00000000698	-	100	68.508	ENSONIG00000010661	imp3	99	68.508	Oreochromis_niloticus
ENSCSAVG00000000698	-	99	63.536	ENSOCUG00000004690	IMP3	98	63.536	Oryctolagus_cuniculus
ENSCSAVG00000000698	-	100	65.193	ENSORLG00000004484	imp3	99	65.193	Oryzias_latipes
ENSCSAVG00000000698	-	100	65.193	ENSORLG00020003771	imp3	99	65.193	Oryzias_latipes_hni
ENSCSAVG00000000698	-	100	64.641	ENSORLG00015006933	imp3	99	64.641	Oryzias_latipes_hsok
ENSCSAVG00000000698	-	100	67.956	ENSOMEG00000016160	imp3	99	67.956	Oryzias_melastigma
ENSCSAVG00000000698	-	99	63.536	ENSOGAG00000004917	IMP3	98	63.536	Otolemur_garnettii
ENSCSAVG00000000698	-	99	62.983	ENSPPAG00000009241	IMP3	98	62.983	Pan_paniscus
ENSCSAVG00000000698	-	99	63.536	ENSPPRG00000018701	IMP3	98	63.536	Panthera_pardus
ENSCSAVG00000000698	-	99	62.983	ENSPTRG00000052235	IMP3	98	62.983	Pan_troglodytes
ENSCSAVG00000000698	-	99	62.983	ENSPANG00000013668	IMP3	98	62.983	Papio_anubis
ENSCSAVG00000000698	-	100	69.061	ENSPKIG00000007169	imp3	99	69.061	Paramormyrops_kingsleyae
ENSCSAVG00000000698	-	100	58.152	ENSPMGG00000009379	imp3	99	58.152	Periophthalmus_magnuspinnatus
ENSCSAVG00000000698	-	99	61.878	ENSPEMG00000013003	Imp3	98	61.878	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000698	-	100	66.298	ENSPFOG00000016529	imp3	99	66.298	Poecilia_formosa
ENSCSAVG00000000698	-	100	66.851	ENSPLAG00000013831	imp3	99	66.851	Poecilia_latipinna
ENSCSAVG00000000698	-	100	66.298	ENSPMEG00000000797	imp3	99	66.298	Poecilia_mexicana
ENSCSAVG00000000698	-	100	66.298	ENSPREG00000006885	imp3	99	66.298	Poecilia_reticulata
ENSCSAVG00000000698	-	99	63.536	ENSPPYG00000006664	IMP3	98	63.536	Pongo_abelii
ENSCSAVG00000000698	-	99	62.983	ENSPCAG00000006920	IMP3	98	62.983	Procavia_capensis
ENSCSAVG00000000698	-	99	62.983	ENSPCOG00000012367	IMP3	98	62.983	Propithecus_coquereli
ENSCSAVG00000000698	-	99	62.983	ENSPVAG00000010036	IMP3	98	62.983	Pteropus_vampyrus
ENSCSAVG00000000698	-	100	67.956	ENSPNYG00000000324	imp3	99	67.956	Pundamilia_nyererei
ENSCSAVG00000000698	-	100	71.271	ENSPNAG00000017113	imp3	99	71.271	Pygocentrus_nattereri
ENSCSAVG00000000698	-	99	61.878	ENSRNOG00000017460	Imp3	98	61.878	Rattus_norvegicus
ENSCSAVG00000000698	-	99	62.983	ENSRBIG00000024522	IMP3	98	62.983	Rhinopithecus_bieti
ENSCSAVG00000000698	-	99	62.983	ENSRROG00000024157	IMP3	98	62.983	Rhinopithecus_roxellana
ENSCSAVG00000000698	-	99	51.381	YHR148W	-	99	51.381	Saccharomyces_cerevisiae
ENSCSAVG00000000698	-	99	62.983	ENSSBOG00000006542	-	98	62.983	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000698	-	99	53.039	ENSSBOG00000026404	-	98	53.039	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000698	-	99	61.326	ENSSHAG00000006200	IMP3	98	61.326	Sarcophilus_harrisii
ENSCSAVG00000000698	-	100	67.403	ENSSFOG00015012483	imp3	99	67.403	Scleropages_formosus
ENSCSAVG00000000698	-	100	66.851	ENSSMAG00000007865	imp3	99	66.851	Scophthalmus_maximus
ENSCSAVG00000000698	-	100	68.508	ENSSDUG00000010594	imp3	99	68.508	Seriola_dumerili
ENSCSAVG00000000698	-	100	68.508	ENSSLDG00000015587	imp3	99	68.508	Seriola_lalandi_dorsalis
ENSCSAVG00000000698	-	99	64.088	ENSSARG00000009657	IMP3	98	64.088	Sorex_araneus
ENSCSAVG00000000698	-	100	67.956	ENSSPAG00000002088	imp3	99	67.956	Stegastes_partitus
ENSCSAVG00000000698	-	100	49.727	ENSTGUG00000013228	IMP3	99	51.366	Taeniopygia_guttata
ENSCSAVG00000000698	-	100	67.956	ENSTRUG00000025783	imp3	99	67.956	Takifugu_rubripes
ENSCSAVG00000000698	-	99	64.088	ENSUAMG00000022724	IMP3	98	64.088	Ursus_americanus
ENSCSAVG00000000698	-	99	64.088	ENSUMAG00000003736	IMP3	98	64.088	Ursus_maritimus
ENSCSAVG00000000698	-	99	64.088	ENSVVUG00000019589	IMP3	98	64.088	Vulpes_vulpes
ENSCSAVG00000000698	-	96	66.092	ENSXCOG00000007392	imp3	95	66.092	Xiphophorus_couchianus
ENSCSAVG00000000698	-	100	66.851	ENSXMAG00000023049	imp3	99	66.851	Xiphophorus_maculatus