EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000721 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3036 bases
Position: chrreftig_209:374660-377695
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001293	tRNA_SAD	PF07973.14	7.5e-13	1	1
ENSCSAVP00000001294	tRNA_SAD	PF07973.14	2.7e-12	1	1
ENSCSAVP00000001294	tRNA-synt_2c	PF01411.19	1.5e-211	1	1
ENSCSAVP00000001293	tRNA-synt_2c	PF01411.19	1.6e-211	1	1
ENSCSAVP00000001293	DHHA1	PF02272.19	2.3e-13	1	1
ENSCSAVP00000001294	DHHA1	PF02272.19	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001309	-	2916	-	ENSCSAVP00000001293	972 (aa)	-	H2Y7J5
ENSCSAVT00000001310	-	2760	-	ENSCSAVP00000001294	919 (aa)	-	H2Y7J6

Gene Model

Click here to download ENSCSAVG00000000721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000721	-	99	59.179	ENSG00000090861	AARS	100	59.179	Homo_sapiens
ENSCSAVG00000000721	-	99	59.465	ENSAPOG00000022413	aars	100	59.465	Acanthochromis_polyacanthus
ENSCSAVG00000000721	-	99	59.077	ENSAMEG00000004815	AARS	100	59.077	Ailuropoda_melanoleuca
ENSCSAVG00000000721	-	99	59.465	ENSACIG00000016586	aars	100	59.465	Amphilophus_citrinellus
ENSCSAVG00000000721	-	99	59.465	ENSAOCG00000007036	aars	100	59.465	Amphiprion_ocellaris
ENSCSAVG00000000721	-	99	59.259	ENSAPEG00000022892	aars	100	59.259	Amphiprion_percula
ENSCSAVG00000000721	-	99	59.774	ENSATEG00000013826	aars	100	59.774	Anabas_testudineus
ENSCSAVG00000000721	-	79	64.674	ENSAPLG00000008519	AARS	99	49.426	Anas_platyrhynchos
ENSCSAVG00000000721	-	99	59.692	ENSACAG00000002808	AARS	100	59.692	Anolis_carolinensis
ENSCSAVG00000000721	-	99	54.592	ENSANAG00000029082	AARS	97	67.111	Aotus_nancymaae
ENSCSAVG00000000721	-	99	59.671	ENSACLG00000022314	aars	100	59.671	Astatotilapia_calliptera
ENSCSAVG00000000721	-	99	60.165	ENSAMXG00000003368	aars	100	59.568	Astyanax_mexicanus
ENSCSAVG00000000721	-	99	59.487	ENSBTAG00000019810	AARS	100	59.487	Bos_taurus
ENSCSAVG00000000721	-	98	52.440	WBGene00000197	aars-2	99	52.440	Caenorhabditis_elegans
ENSCSAVG00000000721	-	99	59.240	ENSCJAG00000014562	AARS	100	68.273	Callithrix_jacchus
ENSCSAVG00000000721	-	99	58.462	ENSCAFG00000020132	AARS	100	58.462	Canis_familiaris
ENSCSAVG00000000721	-	99	58.462	ENSCAFG00020020967	AARS	100	58.462	Canis_lupus_dingo
ENSCSAVG00000000721	-	99	59.590	ENSCHIG00000015632	AARS	100	59.590	Capra_hircus
ENSCSAVG00000000721	-	99	59.385	ENSTSYG00000010987	AARS	99	68.400	Carlito_syrichta
ENSCSAVG00000000721	-	96	60.870	ENSCAPG00000013564	AARS	100	60.870	Cavia_aperea
ENSCSAVG00000000721	-	99	59.282	ENSCPOG00000002373	AARS	100	59.282	Cavia_porcellus
ENSCSAVG00000000721	-	99	59.340	ENSCCAG00000001818	AARS	95	67.556	Cebus_capucinus
ENSCSAVG00000000721	-	99	59.179	ENSCATG00000032821	AARS	99	68.400	Cercocebus_atys
ENSCSAVG00000000721	-	99	59.138	ENSCLAG00000004366	AARS	100	59.138	Chinchilla_lanigera
ENSCSAVG00000000721	-	99	59.077	ENSCSAG00000004476	AARS	100	59.077	Chlorocebus_sabaeus
ENSCSAVG00000000721	-	54	63.063	ENSCHOG00000000347	-	61	63.063	Choloepus_hoffmanni
ENSCSAVG00000000721	-	99	59.651	ENSCPBG00000002995	AARS	100	59.651	Chrysemys_picta_bellii
ENSCSAVG00000000721	-	99	80.849	ENSCING00000024107	-	99	80.849	Ciona_intestinalis
ENSCSAVG00000000721	-	99	56.923	ENSCANG00000040257	AARS	99	68.000	Colobus_angolensis_palliatus
ENSCSAVG00000000721	-	99	59.282	ENSCGRG00001014390	AARS	100	59.282	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000721	-	99	59.282	ENSCGRG00000017420	AARS	100	59.282	Cricetulus_griseus_crigri
ENSCSAVG00000000721	-	99	59.259	ENSCSEG00000014258	aars	100	59.259	Cynoglossus_semilaevis
ENSCSAVG00000000721	-	84	58.608	ENSCVAG00000000882	aars	100	58.801	Cyprinodon_variegatus
ENSCSAVG00000000721	-	99	59.671	ENSDARG00000069142	aars	94	68.780	Danio_rerio
ENSCSAVG00000000721	-	99	57.825	ENSDNOG00000004586	AARS	100	57.825	Dasypus_novemcinctus
ENSCSAVG00000000721	-	99	59.385	ENSDORG00000004110	Aars	100	59.385	Dipodomys_ordii
ENSCSAVG00000000721	-	99	55.222	FBgn0027094	AlaRS	99	55.222	Drosophila_melanogaster
ENSCSAVG00000000721	-	99	54.303	ENSETEG00000002451	AARS	100	54.303	Echinops_telfairi
ENSCSAVG00000000721	-	99	59.317	ENSEBUG00000004521	aars	99	59.412	Eptatretus_burgeri
ENSCSAVG00000000721	-	99	59.590	ENSEASG00005013408	AARS	91	59.590	Equus_asinus_asinus
ENSCSAVG00000000721	-	99	59.590	ENSECAG00000008561	AARS	95	59.590	Equus_caballus
ENSCSAVG00000000721	-	92	64.331	ENSEEUG00000006335	AARS	92	64.331	Erinaceus_europaeus
ENSCSAVG00000000721	-	99	59.774	ENSELUG00000015496	aars	100	59.774	Esox_lucius
ENSCSAVG00000000721	-	99	59.179	ENSFCAG00000009482	AARS	100	59.179	Felis_catus
ENSCSAVG00000000721	-	99	59.856	ENSFALG00000007196	AARS	100	59.856	Ficedula_albicollis
ENSCSAVG00000000721	-	99	59.282	ENSFDAG00000011896	AARS	100	59.282	Fukomys_damarensis
ENSCSAVG00000000721	-	59	61.679	ENSFHEG00000004067	aars	90	61.931	Fundulus_heteroclitus
ENSCSAVG00000000721	-	99	55.155	ENSGMOG00000008147	aars	100	55.155	Gadus_morhua
ENSCSAVG00000000721	-	99	60.164	ENSGALG00000001965	AARS	100	60.164	Gallus_gallus
ENSCSAVG00000000721	-	99	59.877	ENSGAFG00000015182	aars	100	59.877	Gambusia_affinis
ENSCSAVG00000000721	-	99	55.590	ENSGACG00000002667	aars	100	55.453	Gasterosteus_aculeatus
ENSCSAVG00000000721	-	99	59.959	ENSGAGG00000014004	AARS	100	59.959	Gopherus_agassizii
ENSCSAVG00000000721	-	90	69.024	ENSGGOG00000008737	AARS	99	69.024	Gorilla_gorilla
ENSCSAVG00000000721	-	99	55.304	ENSHBUG00000011211	aars	100	55.304	Haplochromis_burtoni
ENSCSAVG00000000721	-	99	59.385	ENSHGLG00000011756	AARS	100	59.385	Heterocephalus_glaber_female
ENSCSAVG00000000721	-	99	59.385	ENSHGLG00100011337	AARS	100	59.385	Heterocephalus_glaber_male
ENSCSAVG00000000721	-	99	59.671	ENSHCOG00000012089	aars	100	59.671	Hippocampus_comes
ENSCSAVG00000000721	-	99	59.568	ENSIPUG00000020538	aars	100	59.568	Ictalurus_punctatus
ENSCSAVG00000000721	-	99	59.179	ENSSTOG00000006856	AARS	100	59.179	Ictidomys_tridecemlineatus
ENSCSAVG00000000721	-	99	58.974	ENSJJAG00000008731	Aars	100	58.974	Jaculus_jaculus
ENSCSAVG00000000721	-	99	59.465	ENSKMAG00000009832	aars	100	59.465	Kryptolebias_marmoratus
ENSCSAVG00000000721	-	99	59.568	ENSLBEG00000018551	aars	100	59.568	Labrus_bergylta
ENSCSAVG00000000721	-	99	61.054	ENSLACG00000004892	AARS	99	61.054	Latimeria_chalumnae
ENSCSAVG00000000721	-	99	58.016	ENSLAFG00000006645	AARS	100	58.016	Loxodonta_africana
ENSCSAVG00000000721	-	99	58.974	ENSMFAG00000002309	AARS	97	66.376	Macaca_fascicularis
ENSCSAVG00000000721	-	99	58.974	ENSMMUG00000021653	AARS	99	67.600	Macaca_mulatta
ENSCSAVG00000000721	-	99	56.849	ENSMNEG00000014902	AARS	97	66.376	Macaca_nemestrina
ENSCSAVG00000000721	-	95	56.156	ENSMLEG00000035037	AARS	100	56.156	Mandrillus_leucophaeus
ENSCSAVG00000000721	-	99	59.877	ENSMAMG00000016945	aars	100	59.877	Mastacembelus_armatus
ENSCSAVG00000000721	-	99	59.568	ENSMZEG00005010733	aars	100	59.568	Maylandia_zebra
ENSCSAVG00000000721	-	99	59.959	ENSMGAG00000002038	AARS	99	59.959	Meleagris_gallopavo
ENSCSAVG00000000721	-	99	59.487	ENSMAUG00000021342	Aars	100	59.487	Mesocricetus_auratus
ENSCSAVG00000000721	-	99	59.529	ENSMICG00000000255	AARS	99	68.675	Microcebus_murinus
ENSCSAVG00000000721	-	99	59.487	ENSMOCG00000005336	Aars	100	59.487	Microtus_ochrogaster
ENSCSAVG00000000721	-	99	58.702	ENSMMOG00000002584	aars	99	58.702	Mola_mola
ENSCSAVG00000000721	-	99	58.782	ENSMODG00000014518	AARS	99	58.782	Monodelphis_domestica
ENSCSAVG00000000721	-	99	59.671	ENSMALG00000007912	aars	100	59.671	Monopterus_albus
ENSCSAVG00000000721	-	99	59.385	ENSMUSG00000031960	Aars	100	59.385	Mus_musculus
ENSCSAVG00000000721	-	99	58.974	ENSMPUG00000010060	AARS	100	58.974	Mustela_putorius_furo
ENSCSAVG00000000721	-	99	59.590	ENSMLUG00000007431	AARS	100	59.590	Myotis_lucifugus
ENSCSAVG00000000721	-	99	59.487	ENSNGAG00000003676	Aars	100	59.487	Nannospalax_galili
ENSCSAVG00000000721	-	99	59.465	ENSNBRG00000007321	aars	100	59.465	Neolamprologus_brichardi
ENSCSAVG00000000721	-	59	63.298	ENSMEUG00000006934	-	99	64.362	Notamacropus_eugenii
ENSCSAVG00000000721	-	93	52.851	ENSMEUG00000016034	-	99	52.851	Notamacropus_eugenii
ENSCSAVG00000000721	-	99	59.440	ENSOPRG00000003373	AARS	99	59.440	Ochotona_princeps
ENSCSAVG00000000721	-	99	54.995	ENSODEG00000014435	-	100	55.201	Octodon_degus
ENSCSAVG00000000721	-	82	63.462	ENSODEG00000014606	-	67	63.462	Octodon_degus
ENSCSAVG00000000721	-	99	59.774	ENSONIG00000011185	aars	100	59.774	Oreochromis_niloticus
ENSCSAVG00000000721	-	99	60.515	ENSOANG00000001157	AARS	99	60.515	Ornithorhynchus_anatinus
ENSCSAVG00000000721	-	99	58.074	ENSOCUG00000008872	AARS	100	58.074	Oryctolagus_cuniculus
ENSCSAVG00000000721	-	99	59.362	ENSORLG00000013398	aars	100	59.362	Oryzias_latipes
ENSCSAVG00000000721	-	99	59.362	ENSORLG00020017581	aars	100	59.362	Oryzias_latipes_hni
ENSCSAVG00000000721	-	99	59.259	ENSORLG00015007783	aars	100	59.259	Oryzias_latipes_hsok
ENSCSAVG00000000721	-	99	59.362	ENSOMEG00000014361	aars	100	59.362	Oryzias_melastigma
ENSCSAVG00000000721	-	99	59.282	ENSOGAG00000011601	AARS	100	59.282	Otolemur_garnettii
ENSCSAVG00000000721	-	99	59.692	ENSOARG00000005286	AARS	100	59.692	Ovis_aries
ENSCSAVG00000000721	-	99	59.077	ENSPPAG00000040404	AARS	99	68.400	Pan_paniscus
ENSCSAVG00000000721	-	99	59.179	ENSPPRG00000013214	AARS	100	59.179	Panthera_pardus
ENSCSAVG00000000721	-	99	59.179	ENSPTIG00000021477	AARS	100	59.179	Panthera_tigris_altaica
ENSCSAVG00000000721	-	99	59.077	ENSPTRG00000008297	AARS	99	68.400	Pan_troglodytes
ENSCSAVG00000000721	-	99	59.077	ENSPANG00000020452	AARS	97	66.812	Papio_anubis
ENSCSAVG00000000721	-	99	59.546	ENSPKIG00000002593	aars	99	59.546	Paramormyrops_kingsleyae
ENSCSAVG00000000721	-	99	59.426	ENSPSIG00000012820	AARS	100	59.426	Pelodiscus_sinensis
ENSCSAVG00000000721	-	99	59.053	ENSPMGG00000016971	aars	100	59.053	Periophthalmus_magnuspinnatus
ENSCSAVG00000000721	-	99	59.385	ENSPEMG00000010864	Aars	100	59.385	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000721	-	99	55.922	ENSPMAG00000001946	aars	99	55.922	Petromyzon_marinus
ENSCSAVG00000000721	-	99	60.000	ENSPCIG00000010681	AARS	99	60.000	Phascolarctos_cinereus
ENSCSAVG00000000721	-	99	59.774	ENSPFOG00000015763	aars	100	59.774	Poecilia_formosa
ENSCSAVG00000000721	-	99	59.877	ENSPLAG00000014226	aars	100	59.877	Poecilia_latipinna
ENSCSAVG00000000721	-	99	59.774	ENSPMEG00000019736	aars	100	59.774	Poecilia_mexicana
ENSCSAVG00000000721	-	99	59.568	ENSPREG00000019562	aars	100	59.568	Poecilia_reticulata
ENSCSAVG00000000721	-	76	66.298	ENSPPYG00000007544	-	77	66.298	Pongo_abelii
ENSCSAVG00000000721	-	82	63.265	ENSPCAG00000012883	AARS	80	63.265	Procavia_capensis
ENSCSAVG00000000721	-	99	59.221	ENSPCOG00000016630	AARS	99	68.400	Propithecus_coquereli
ENSCSAVG00000000721	-	99	59.590	ENSPVAG00000000669	AARS	100	59.590	Pteropus_vampyrus
ENSCSAVG00000000721	-	99	59.568	ENSPNYG00000010796	aars	100	59.568	Pundamilia_nyererei
ENSCSAVG00000000721	-	99	60.329	ENSPNAG00000015269	aars	92	60.329	Pygocentrus_nattereri
ENSCSAVG00000000721	-	99	59.077	ENSRNOG00000018404	Aars	100	59.077	Rattus_norvegicus
ENSCSAVG00000000721	-	99	58.974	ENSRBIG00000032650	AARS	100	58.974	Rhinopithecus_bieti
ENSCSAVG00000000721	-	99	59.282	ENSRROG00000027324	AARS	99	63.869	Rhinopithecus_roxellana
ENSCSAVG00000000721	-	99	47.897	YOR335C	ALA1	99	47.897	Saccharomyces_cerevisiae
ENSCSAVG00000000721	-	99	59.138	ENSSBOG00000022141	AARS	100	68.273	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000721	-	99	59.959	ENSSHAG00000007347	AARS	99	59.959	Sarcophilus_harrisii
ENSCSAVG00000000721	-	99	59.030	ENSSFOG00015011897	AARS	99	59.030	Scleropages_formosus
ENSCSAVG00000000721	-	99	58.678	ENSSFOG00015013147	aars	99	58.678	Scleropages_formosus
ENSCSAVG00000000721	-	99	59.465	ENSSMAG00000014488	aars	100	59.465	Scophthalmus_maximus
ENSCSAVG00000000721	-	99	59.053	ENSSDUG00000021127	aars	100	59.053	Seriola_dumerili
ENSCSAVG00000000721	-	99	59.259	ENSSLDG00000017716	aars	100	59.259	Seriola_lalandi_dorsalis
ENSCSAVG00000000721	-	53	71.533	ENSSARG00000006382	-	69	71.533	Sorex_araneus
ENSCSAVG00000000721	-	99	59.651	ENSSPUG00000001911	AARS	100	59.651	Sphenodon_punctatus
ENSCSAVG00000000721	-	99	59.774	ENSSPAG00000001290	aars	100	59.774	Stegastes_partitus
ENSCSAVG00000000721	-	99	58.763	ENSSSCG00000002723	-	99	58.763	Sus_scrofa
ENSCSAVG00000000721	-	96	35.294	ENSSSCG00000040225	-	100	35.288	Sus_scrofa
ENSCSAVG00000000721	-	99	59.856	ENSTGUG00000005683	AARS	100	59.856	Taeniopygia_guttata
ENSCSAVG00000000721	-	94	59.301	ENSTRUG00000000907	aars	100	67.213	Takifugu_rubripes
ENSCSAVG00000000721	-	99	59.794	ENSTNIG00000004016	aars	99	59.794	Tetraodon_nigroviridis
ENSCSAVG00000000721	-	94	43.996	ENSTBEG00000017122	-	99	43.996	Tupaia_belangeri
ENSCSAVG00000000721	-	99	59.077	ENSUAMG00000007008	AARS	100	59.077	Ursus_americanus
ENSCSAVG00000000721	-	99	59.179	ENSUMAG00000016975	AARS	100	59.179	Ursus_maritimus
ENSCSAVG00000000721	-	74	63.918	ENSVPAG00000003189	AARS	78	63.918	Vicugna_pacos
ENSCSAVG00000000721	-	99	58.564	ENSVVUG00000018036	AARS	100	58.564	Vulpes_vulpes
ENSCSAVG00000000721	-	99	59.548	ENSXETG00000007668	aars	100	59.548	Xenopus_tropicalis
ENSCSAVG00000000721	-	99	59.877	ENSXCOG00000013625	aars	100	59.877	Xiphophorus_couchianus
ENSCSAVG00000000721	-	99	59.774	ENSXMAG00000006282	aars	100	59.774	Xiphophorus_maculatus