EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000748 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 534 bases
Position: chrreftig_5:1103597-1104130
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001345	RRM_1	PF00076.22	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001361	-	534	-	ENSCSAVP00000001345	178 (aa)	-	H2Y7P7

Gene Model

Click here to download ENSCSAVG00000000748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000748's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000748	-	96	57.558	ENSG00000184209	SNRNP35	70	57.558	Homo_sapiens
ENSCSAVG00000000748	-	94	59.172	ENSAMEG00000019650	SNRNP35	68	59.172	Ailuropoda_melanoleuca
ENSCSAVG00000000748	-	92	59.509	ENSACIG00000003238	snrnp35	77	59.509	Amphilophus_citrinellus
ENSCSAVG00000000748	-	92	59.509	ENSAOCG00000007701	snrnp35	76	59.509	Amphiprion_ocellaris
ENSCSAVG00000000748	-	92	59.509	ENSAPEG00000023725	snrnp35	77	59.509	Amphiprion_percula
ENSCSAVG00000000748	-	92	58.896	ENSATEG00000021269	snrnp35	84	58.896	Anabas_testudineus
ENSCSAVG00000000748	-	92	60.736	ENSAPLG00000015654	SNRNP35	66	60.736	Anas_platyrhynchos
ENSCSAVG00000000748	-	92	59.509	ENSACAG00000015421	SNRNP35	63	59.509	Anolis_carolinensis
ENSCSAVG00000000748	-	96	56.977	ENSANAG00000025109	SNRNP35	67	56.977	Aotus_nancymaae
ENSCSAVG00000000748	-	92	59.509	ENSACLG00000020994	SNRNP35	78	59.509	Astatotilapia_calliptera
ENSCSAVG00000000748	-	92	59.509	ENSACLG00000020890	snrnp35	78	59.509	Astatotilapia_calliptera
ENSCSAVG00000000748	-	92	57.669	ENSAMXG00000026163	snrnp35	78	57.669	Astyanax_mexicanus
ENSCSAVG00000000748	-	94	58.580	ENSBTAG00000008060	SNRNP35	69	58.580	Bos_taurus
ENSCSAVG00000000748	-	96	56.977	ENSCJAG00000007131	SNRNP35	69	56.977	Callithrix_jacchus
ENSCSAVG00000000748	-	94	59.763	ENSCAFG00000007484	SNRNP35	69	59.763	Canis_familiaris
ENSCSAVG00000000748	-	94	59.763	ENSCAFG00020015272	-	69	59.763	Canis_lupus_dingo
ENSCSAVG00000000748	-	94	58.580	ENSCHIG00000006364	SNRNP35	69	58.580	Capra_hircus
ENSCSAVG00000000748	-	94	58.580	ENSTSYG00000034104	SNRNP35	68	58.580	Carlito_syrichta
ENSCSAVG00000000748	-	96	54.070	ENSCPOG00000002548	SNRNP35	70	54.070	Cavia_porcellus
ENSCSAVG00000000748	-	96	56.977	ENSCCAG00000001685	SNRNP35	68	56.977	Cebus_capucinus
ENSCSAVG00000000748	-	96	57.558	ENSCATG00000021946	SNRNP35	70	57.558	Cercocebus_atys
ENSCSAVG00000000748	-	96	54.070	ENSCLAG00000010232	SNRNP35	70	54.070	Chinchilla_lanigera
ENSCSAVG00000000748	-	96	57.558	ENSCSAG00000018950	SNRNP35	70	57.558	Chlorocebus_sabaeus
ENSCSAVG00000000748	-	96	58.140	ENSCHOG00000006263	SNRNP35	70	58.140	Choloepus_hoffmanni
ENSCSAVG00000000748	-	94	59.763	ENSCPBG00000025965	SNRNP35	63	59.763	Chrysemys_picta_bellii
ENSCSAVG00000000748	-	96	58.140	ENSCANG00000025364	SNRNP35	69	58.140	Colobus_angolensis_palliatus
ENSCSAVG00000000748	-	94	57.396	ENSCGRG00001012630	Snrnp35	69	57.396	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000748	-	94	57.396	ENSCGRG00000002063	Snrnp35	69	57.396	Cricetulus_griseus_crigri
ENSCSAVG00000000748	-	92	56.442	ENSDARG00000099913	snrnp35	78	56.442	Danio_rerio
ENSCSAVG00000000748	-	96	57.558	ENSDNOG00000038603	SNRNP35	70	57.558	Dasypus_novemcinctus
ENSCSAVG00000000748	-	96	55.814	ENSDORG00000001859	Snrnp35	70	55.814	Dipodomys_ordii
ENSCSAVG00000000748	-	93	51.807	ENSEBUG00000003535	snrnp35	62	51.807	Eptatretus_burgeri
ENSCSAVG00000000748	-	94	58.580	ENSEASG00005012617	SNRNP35	69	58.580	Equus_asinus_asinus
ENSCSAVG00000000748	-	94	58.580	ENSECAG00000006080	SNRNP35	69	58.580	Equus_caballus
ENSCSAVG00000000748	-	94	59.763	ENSEEUG00000011544	SNRNP35	68	59.763	Erinaceus_europaeus
ENSCSAVG00000000748	-	92	58.282	ENSELUG00000000071	snrnp35	68	58.282	Esox_lucius
ENSCSAVG00000000748	-	94	59.172	ENSFCAG00000001159	SNRNP35	67	59.172	Felis_catus
ENSCSAVG00000000748	-	92	60.736	ENSFALG00000014650	SNRNP35	67	60.736	Ficedula_albicollis
ENSCSAVG00000000748	-	96	48.256	ENSFDAG00000018743	SNRNP35	68	48.256	Fukomys_damarensis
ENSCSAVG00000000748	-	92	55.828	ENSGMOG00000002299	snrnp35	70	55.828	Gadus_morhua
ENSCSAVG00000000748	-	92	60.123	ENSGALG00000003318	SNRNP35	62	60.123	Gallus_gallus
ENSCSAVG00000000748	-	92	60.123	ENSGACG00000020631	snrnp35	70	60.123	Gasterosteus_aculeatus
ENSCSAVG00000000748	-	96	57.558	ENSGGOG00000015936	SNRNP35	69	57.558	Gorilla_gorilla
ENSCSAVG00000000748	-	92	59.509	ENSHBUG00000015853	snrnp35	77	59.509	Haplochromis_burtoni
ENSCSAVG00000000748	-	96	54.651	ENSHGLG00000017961	SNRNP35	70	54.651	Heterocephalus_glaber_female
ENSCSAVG00000000748	-	96	54.651	ENSHGLG00100019252	SNRNP35	70	54.651	Heterocephalus_glaber_male
ENSCSAVG00000000748	-	92	55.215	ENSIPUG00000016053	snrnp35	62	55.215	Ictalurus_punctatus
ENSCSAVG00000000748	-	94	56.213	ENSSTOG00000025145	SNRNP35	69	56.213	Ictidomys_tridecemlineatus
ENSCSAVG00000000748	-	94	57.396	ENSJJAG00000013421	Snrnp35	67	57.396	Jaculus_jaculus
ENSCSAVG00000000748	-	96	56.395	ENSLACG00000017176	SNRNP35	62	56.395	Latimeria_chalumnae
ENSCSAVG00000000748	-	92	57.669	ENSLOCG00000018154	snrnp35	60	57.669	Lepisosteus_oculatus
ENSCSAVG00000000748	-	97	57.225	ENSLAFG00000022302	SNRNP35	70	57.225	Loxodonta_africana
ENSCSAVG00000000748	-	96	57.558	ENSMFAG00000008986	SNRNP35	70	57.558	Macaca_fascicularis
ENSCSAVG00000000748	-	96	57.558	ENSMMUG00000008411	SNRNP35	70	57.558	Macaca_mulatta
ENSCSAVG00000000748	-	96	57.558	ENSMNEG00000018139	SNRNP35	70	57.558	Macaca_nemestrina
ENSCSAVG00000000748	-	96	57.558	ENSMLEG00000040998	SNRNP35	69	57.558	Mandrillus_leucophaeus
ENSCSAVG00000000748	-	92	58.896	ENSMAMG00000018927	snrnp35	69	58.896	Mastacembelus_armatus
ENSCSAVG00000000748	-	92	59.509	ENSMZEG00005018928	snrnp35	78	59.509	Maylandia_zebra
ENSCSAVG00000000748	-	90	54.037	ENSMZEG00005018947	-	76	54.037	Maylandia_zebra
ENSCSAVG00000000748	-	92	58.896	ENSMGAG00000003241	SNRNP35	67	58.896	Meleagris_gallopavo
ENSCSAVG00000000748	-	94	57.396	ENSMAUG00000001690	Snrnp35	69	57.396	Mesocricetus_auratus
ENSCSAVG00000000748	-	96	57.558	ENSMICG00000026512	SNRNP35	69	57.558	Microcebus_murinus
ENSCSAVG00000000748	-	94	57.396	ENSMOCG00000000548	Snrnp35	69	57.396	Microtus_ochrogaster
ENSCSAVG00000000748	-	92	58.896	ENSMMOG00000018779	snrnp35	69	58.896	Mola_mola
ENSCSAVG00000000748	-	94	61.538	ENSMODG00000012481	SNRNP35	94	61.538	Monodelphis_domestica
ENSCSAVG00000000748	-	94	57.396	MGP_CAROLIEiJ_G0027752	Snrnp35	95	53.913	Mus_caroli
ENSCSAVG00000000748	-	94	57.396	ENSMUSG00000029402	Snrnp35	95	53.913	Mus_musculus
ENSCSAVG00000000748	-	94	56.805	MGP_PahariEiJ_G0024332	Snrnp35	95	53.913	Mus_pahari
ENSCSAVG00000000748	-	94	57.396	MGP_SPRETEiJ_G0028751	Snrnp35	95	53.913	Mus_spretus
ENSCSAVG00000000748	-	94	59.172	ENSMPUG00000019392	SNRNP35	69	59.172	Mustela_putorius_furo
ENSCSAVG00000000748	-	94	59.172	ENSMLUG00000025311	SNRNP35	69	59.172	Myotis_lucifugus
ENSCSAVG00000000748	-	96	54.651	ENSNGAG00000010711	Snrnp35	69	54.651	Nannospalax_galili
ENSCSAVG00000000748	-	96	57.558	ENSNLEG00000029859	SNRNP35	69	57.558	Nomascus_leucogenys
ENSCSAVG00000000748	-	96	56.977	ENSOPRG00000011119	SNRNP35	71	56.322	Ochotona_princeps
ENSCSAVG00000000748	-	94	55.621	ENSODEG00000019870	SNRNP35	69	55.621	Octodon_degus
ENSCSAVG00000000748	-	92	59.509	ENSONIG00000021361	snrnp35	69	59.509	Oreochromis_niloticus
ENSCSAVG00000000748	-	94	60.947	ENSOANG00000002697	SNRNP35	70	60.947	Ornithorhynchus_anatinus
ENSCSAVG00000000748	-	96	56.395	ENSOCUG00000021248	SNRNP35	70	56.395	Oryctolagus_cuniculus
ENSCSAVG00000000748	-	92	56.442	ENSORLG00000005673	snrnp35	77	56.442	Oryzias_latipes
ENSCSAVG00000000748	-	92	57.055	ENSORLG00015014439	snrnp35	80	57.055	Oryzias_latipes_hsok
ENSCSAVG00000000748	-	96	58.140	ENSOGAG00000011301	SNRNP35	70	58.140	Otolemur_garnettii
ENSCSAVG00000000748	-	94	58.580	ENSOARG00000004583	SNRNP35	69	58.580	Ovis_aries
ENSCSAVG00000000748	-	96	57.558	ENSPPAG00000000480	SNRNP35	69	57.558	Pan_paniscus
ENSCSAVG00000000748	-	94	59.172	ENSPPRG00000013139	SNRNP35	67	59.172	Panthera_pardus
ENSCSAVG00000000748	-	94	59.172	ENSPTIG00000015832	SNRNP35	67	59.172	Panthera_tigris_altaica
ENSCSAVG00000000748	-	96	57.558	ENSPTRG00000023573	SNRNP35	69	57.558	Pan_troglodytes
ENSCSAVG00000000748	-	96	57.558	ENSPANG00000019739	SNRNP35	69	57.558	Papio_anubis
ENSCSAVG00000000748	-	92	57.669	ENSPKIG00000005221	snrnp35	78	57.669	Paramormyrops_kingsleyae
ENSCSAVG00000000748	-	94	58.580	ENSPSIG00000000450	SNRNP35	63	58.580	Pelodiscus_sinensis
ENSCSAVG00000000748	-	94	61.538	ENSPCIG00000010978	SNRNP35	64	61.538	Phascolarctos_cinereus
ENSCSAVG00000000748	-	92	57.669	ENSPFOG00000019881	snrnp35	73	57.669	Poecilia_formosa
ENSCSAVG00000000748	-	96	57.558	ENSPPYG00000005088	SNRNP35	69	57.558	Pongo_abelii
ENSCSAVG00000000748	-	97	56.897	ENSPCAG00000011478	SNRNP35	71	56.571	Procavia_capensis
ENSCSAVG00000000748	-	96	57.558	ENSPCOG00000009946	SNRNP35	70	57.558	Propithecus_coquereli
ENSCSAVG00000000748	-	94	58.580	ENSPVAG00000015317	SNRNP35	68	58.580	Pteropus_vampyrus
ENSCSAVG00000000748	-	92	58.282	ENSPNAG00000020589	snrnp35	63	58.282	Pygocentrus_nattereri
ENSCSAVG00000000748	-	94	57.396	ENSRNOG00000001060	Snrnp35	69	57.396	Rattus_norvegicus
ENSCSAVG00000000748	-	96	57.558	ENSRBIG00000043111	SNRNP35	69	57.558	Rhinopithecus_bieti
ENSCSAVG00000000748	-	96	57.558	ENSRROG00000032878	SNRNP35	69	57.558	Rhinopithecus_roxellana
ENSCSAVG00000000748	-	96	56.977	ENSSBOG00000012231	SNRNP35	68	56.977	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000748	-	94	61.538	ENSSHAG00000001216	-	69	61.538	Sarcophilus_harrisii
ENSCSAVG00000000748	-	94	61.538	ENSSHAG00000015558	-	69	61.538	Sarcophilus_harrisii
ENSCSAVG00000000748	-	92	57.669	ENSSFOG00015003785	snrnp35	87	57.669	Scleropages_formosus
ENSCSAVG00000000748	-	92	59.509	ENSSLDG00000017209	snrnp35	77	59.509	Seriola_lalandi_dorsalis
ENSCSAVG00000000748	-	94	56.805	ENSSARG00000012656	SNRNP35	70	56.805	Sorex_araneus
ENSCSAVG00000000748	-	94	58.580	ENSSPUG00000012768	SNRNP35	64	58.580	Sphenodon_punctatus
ENSCSAVG00000000748	-	92	59.509	ENSSPAG00000008207	snrnp35	76	59.509	Stegastes_partitus
ENSCSAVG00000000748	-	94	59.172	ENSSSCG00000022212	SNRNP35	79	59.172	Sus_scrofa
ENSCSAVG00000000748	-	92	60.736	ENSTGUG00000005364	-	68	60.736	Taeniopygia_guttata
ENSCSAVG00000000748	-	91	60.494	ENSTGUG00000015471	-	61	60.494	Taeniopygia_guttata
ENSCSAVG00000000748	-	92	58.282	ENSTNIG00000009984	snrnp35	78	58.282	Tetraodon_nigroviridis
ENSCSAVG00000000748	-	96	56.977	ENSTBEG00000002309	SNRNP35	70	56.977	Tupaia_belangeri
ENSCSAVG00000000748	-	94	59.172	ENSUAMG00000012611	SNRNP35	69	59.172	Ursus_americanus
ENSCSAVG00000000748	-	94	59.172	ENSUMAG00000003914	SNRNP35	67	59.172	Ursus_maritimus
ENSCSAVG00000000748	-	94	59.763	ENSVVUG00000027761	-	69	59.763	Vulpes_vulpes
ENSCSAVG00000000748	-	92	57.669	ENSXMAG00000019885	snrnp35	65	57.669	Xiphophorus_maculatus