EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000783 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 6616 bases
Position: chrreftig_5:1262863-1269478
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001391	2OG-FeII_Oxy_2	PF13532.6	1.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001408	-	1157	-	ENSCSAVP00000001391	281 (aa)	-	H2Y7U3

Gene Model

Click here to download ENSCSAVG00000000783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000783's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000783	-	98	43.369	ENSG00000166199	ALKBH3	95	50.676	Homo_sapiens
ENSCSAVG00000000783	-	98	44.718	ENSAPOG00000008495	alkbh3	93	44.718	Acanthochromis_polyacanthus
ENSCSAVG00000000783	-	98	41.176	ENSAMEG00000004842	ALKBH3	93	41.577	Ailuropoda_melanoleuca
ENSCSAVG00000000783	-	99	45.324	ENSACIG00000011887	alkbh3	99	45.324	Amphilophus_citrinellus
ENSCSAVG00000000783	-	99	43.902	ENSAOCG00000023500	alkbh3	94	43.902	Amphiprion_ocellaris
ENSCSAVG00000000783	-	99	43.902	ENSAPEG00000011723	alkbh3	94	43.902	Amphiprion_percula
ENSCSAVG00000000783	-	98	44.681	ENSATEG00000021785	alkbh3	93	44.681	Anabas_testudineus
ENSCSAVG00000000783	-	98	31.633	ENSACAG00000000855	ALKBH3	97	32.203	Anolis_carolinensis
ENSCSAVG00000000783	-	98	43.369	ENSANAG00000033941	ALKBH3	97	43.369	Aotus_nancymaae
ENSCSAVG00000000783	-	98	45.552	ENSACLG00000023226	alkbh3	93	45.552	Astatotilapia_calliptera
ENSCSAVG00000000783	-	98	44.203	ENSAMXG00000037076	alkbh3	96	44.203	Astyanax_mexicanus
ENSCSAVG00000000783	-	98	41.818	ENSBTAG00000009518	ALKBH3	96	41.818	Bos_taurus
ENSCSAVG00000000783	-	98	42.756	ENSCJAG00000011353	ALKBH3	98	42.756	Callithrix_jacchus
ENSCSAVG00000000783	-	98	41.727	ENSCAFG00000006657	ALKBH3	96	41.727	Canis_familiaris
ENSCSAVG00000000783	-	98	41.577	ENSCAFG00020006841	ALKBH3	95	41.935	Canis_lupus_dingo
ENSCSAVG00000000783	-	98	42.182	ENSCHIG00000017579	ALKBH3	96	42.182	Capra_hircus
ENSCSAVG00000000783	-	98	44.000	ENSTSYG00000005498	ALKBH3	96	44.000	Carlito_syrichta
ENSCSAVG00000000783	-	99	42.086	ENSCAPG00000004995	ALKBH3	97	42.349	Cavia_aperea
ENSCSAVG00000000783	-	99	42.446	ENSCPOG00000005138	ALKBH3	97	42.446	Cavia_porcellus
ENSCSAVG00000000783	-	98	43.728	ENSCCAG00000036907	ALKBH3	96	43.728	Cebus_capucinus
ENSCSAVG00000000783	-	98	43.369	ENSCATG00000035646	ALKBH3	96	43.369	Cercocebus_atys
ENSCSAVG00000000783	-	99	43.060	ENSCLAG00000016579	ALKBH3	97	43.060	Chinchilla_lanigera
ENSCSAVG00000000783	-	98	44.086	ENSCSAG00000005539	ALKBH3	96	44.086	Chlorocebus_sabaeus
ENSCSAVG00000000783	-	98	42.446	ENSCHOG00000001407	ALKBH3	96	42.446	Choloepus_hoffmanni
ENSCSAVG00000000783	-	98	41.135	ENSCPBG00000012575	ALKBH3	96	41.135	Chrysemys_picta_bellii
ENSCSAVG00000000783	-	55	83.117	ENSCING00000007764	-	100	83.117	Ciona_intestinalis
ENSCSAVG00000000783	-	98	43.728	ENSCANG00000018698	ALKBH3	96	43.728	Colobus_angolensis_palliatus
ENSCSAVG00000000783	-	98	43.525	ENSCGRG00001014489	Alkbh3	96	43.525	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000783	-	98	43.525	ENSCGRG00000017661	Alkbh3	96	43.525	Cricetulus_griseus_crigri
ENSCSAVG00000000783	-	99	45.907	ENSCSEG00000000814	alkbh3	94	45.907	Cynoglossus_semilaevis
ENSCSAVG00000000783	-	98	45.423	ENSCVAG00000009432	alkbh3	93	45.423	Cyprinodon_variegatus
ENSCSAVG00000000783	-	99	46.237	ENSDARG00000045606	alkbh3	96	46.237	Danio_rerio
ENSCSAVG00000000783	-	99	43.728	ENSDNOG00000036652	ALKBH3	98	43.728	Dasypus_novemcinctus
ENSCSAVG00000000783	-	77	49.309	ENSDORG00000000083	Alkbh3	96	43.525	Dipodomys_ordii
ENSCSAVG00000000783	-	98	40.484	ENSEASG00005014856	ALKBH3	94	40.860	Equus_asinus_asinus
ENSCSAVG00000000783	-	98	40.830	ENSECAG00000010673	ALKBH3	94	41.219	Equus_caballus
ENSCSAVG00000000783	-	98	40.780	ENSELUG00000003260	alkbh3	94	40.780	Esox_lucius
ENSCSAVG00000000783	-	98	42.182	ENSFCAG00000029461	ALKBH3	96	42.182	Felis_catus
ENSCSAVG00000000783	-	98	44.128	ENSFALG00000012361	ALKBH3	97	44.128	Ficedula_albicollis
ENSCSAVG00000000783	-	99	41.429	ENSFDAG00000012666	ALKBH3	97	42.199	Fukomys_damarensis
ENSCSAVG00000000783	-	99	44.599	ENSFHEG00000018735	alkbh3	94	44.599	Fundulus_heteroclitus
ENSCSAVG00000000783	-	99	45.965	ENSGMOG00000019146	alkbh3	95	45.965	Gadus_morhua
ENSCSAVG00000000783	-	88	45.344	ENSGALG00000041309	ALKBH3	62	45.344	Gallus_gallus
ENSCSAVG00000000783	-	98	43.416	ENSGAFG00000005814	alkbh3	96	41.538	Gambusia_affinis
ENSCSAVG00000000783	-	98	45.936	ENSGACG00000006950	alkbh3	96	44.727	Gasterosteus_aculeatus
ENSCSAVG00000000783	-	69	51.282	ENSGAGG00000013151	ALKBH3	96	51.282	Gopherus_agassizii
ENSCSAVG00000000783	-	98	43.369	ENSGGOG00000001931	ALKBH3	96	43.369	Gorilla_gorilla
ENSCSAVG00000000783	-	98	45.552	ENSHBUG00000008513	alkbh3	93	45.552	Haplochromis_burtoni
ENSCSAVG00000000783	-	99	42.806	ENSHGLG00000019437	ALKBH3	97	43.885	Heterocephalus_glaber_female
ENSCSAVG00000000783	-	99	38.849	ENSHGLG00100004468	ALKBH3	97	40.141	Heterocephalus_glaber_male
ENSCSAVG00000000783	-	98	45.126	ENSIPUG00000017036	alkbh3	96	45.126	Ictalurus_punctatus
ENSCSAVG00000000783	-	98	44.803	ENSSTOG00000006060	ALKBH3	98	44.803	Ictidomys_tridecemlineatus
ENSCSAVG00000000783	-	99	43.011	ENSJJAG00000018577	-	96	43.011	Jaculus_jaculus
ENSCSAVG00000000783	-	99	45.486	ENSKMAG00000006499	alkbh3	94	45.486	Kryptolebias_marmoratus
ENSCSAVG00000000783	-	99	43.262	ENSLBEG00000004226	alkbh3	94	43.262	Labrus_bergylta
ENSCSAVG00000000783	-	98	44.483	ENSLACG00000017208	ALKBH3	97	44.483	Latimeria_chalumnae
ENSCSAVG00000000783	-	98	44.964	ENSLOCG00000001237	alkbh3	98	44.964	Lepisosteus_oculatus
ENSCSAVG00000000783	-	98	42.652	ENSLAFG00000003441	ALKBH3	96	42.652	Loxodonta_africana
ENSCSAVG00000000783	-	98	43.273	ENSMFAG00000031334	ALKBH3	96	43.273	Macaca_fascicularis
ENSCSAVG00000000783	-	98	43.273	ENSMNEG00000042403	ALKBH3	96	43.273	Macaca_nemestrina
ENSCSAVG00000000783	-	98	43.369	ENSMLEG00000038324	ALKBH3	96	43.369	Mandrillus_leucophaeus
ENSCSAVG00000000783	-	98	45.357	ENSMAMG00000023051	alkbh3	93	45.357	Mastacembelus_armatus
ENSCSAVG00000000783	-	98	45.552	ENSMZEG00005011786	alkbh3	93	45.552	Maylandia_zebra
ENSCSAVG00000000783	-	77	44.240	ENSMGAG00000010479	ALKBH3	96	44.240	Meleagris_gallopavo
ENSCSAVG00000000783	-	98	43.525	ENSMAUG00000009317	Alkbh3	96	43.525	Mesocricetus_auratus
ENSCSAVG00000000783	-	98	41.971	ENSMICG00000014651	ALKBH3	96	41.971	Microcebus_murinus
ENSCSAVG00000000783	-	98	45.455	ENSMOCG00000012816	Alkbh3	96	45.455	Microtus_ochrogaster
ENSCSAVG00000000783	-	68	50.521	ENSMMOG00000020327	alkbh3	72	50.521	Mola_mola
ENSCSAVG00000000783	-	77	48.848	ENSMODG00000019863	-	88	48.848	Monodelphis_domestica
ENSCSAVG00000000783	-	98	45.357	ENSMALG00000017888	alkbh3	93	45.357	Monopterus_albus
ENSCSAVG00000000783	-	98	42.806	MGP_CAROLIEiJ_G0023995	Alkbh3	96	42.806	Mus_caroli
ENSCSAVG00000000783	-	98	42.294	ENSMUSG00000040174	Alkbh3	96	42.294	Mus_musculus
ENSCSAVG00000000783	-	98	42.446	MGP_PahariEiJ_G0025431	Alkbh3	96	42.446	Mus_pahari
ENSCSAVG00000000783	-	98	42.294	MGP_SPRETEiJ_G0024905	Alkbh3	96	42.294	Mus_spretus
ENSCSAVG00000000783	-	98	40.484	ENSMPUG00000006151	ALKBH3	96	41.935	Mustela_putorius_furo
ENSCSAVG00000000783	-	98	42.238	ENSMLUG00000029289	ALKBH3	97	42.238	Myotis_lucifugus
ENSCSAVG00000000783	-	98	43.011	ENSNGAG00000004591	Alkbh3	96	43.011	Nannospalax_galili
ENSCSAVG00000000783	-	99	41.877	ENSNBRG00000016311	alkbh3	94	41.877	Neolamprologus_brichardi
ENSCSAVG00000000783	-	98	43.369	ENSNLEG00000027521	ALKBH3	96	43.369	Nomascus_leucogenys
ENSCSAVG00000000783	-	73	48.529	ENSMEUG00000007604	ALKBH3	96	48.529	Notamacropus_eugenii
ENSCSAVG00000000783	-	98	43.525	ENSOPRG00000006771	ALKBH3	96	43.525	Ochotona_princeps
ENSCSAVG00000000783	-	99	43.110	ENSODEG00000017204	ALKBH3	97	43.110	Octodon_degus
ENSCSAVG00000000783	-	99	44.876	ENSONIG00000015605	alkbh3	95	45.196	Oreochromis_niloticus
ENSCSAVG00000000783	-	98	39.785	ENSOANG00000009208	ALKBH3	95	39.785	Ornithorhynchus_anatinus
ENSCSAVG00000000783	-	98	44.840	ENSOCUG00000016359	ALKBH3	96	44.840	Oryctolagus_cuniculus
ENSCSAVG00000000783	-	99	44.840	ENSORLG00000001437	alkbh3	94	44.840	Oryzias_latipes
ENSCSAVG00000000783	-	90	42.912	ENSORLG00020002409	alkbh3	95	42.636	Oryzias_latipes_hni
ENSCSAVG00000000783	-	99	44.484	ENSORLG00015016266	alkbh3	94	44.484	Oryzias_latipes_hsok
ENSCSAVG00000000783	-	98	47.500	ENSOMEG00000003835	alkbh3	93	47.500	Oryzias_melastigma
ENSCSAVG00000000783	-	98	43.728	ENSOGAG00000009107	ALKBH3	93	43.728	Otolemur_garnettii
ENSCSAVG00000000783	-	98	41.577	ENSOARG00000001123	ALKBH3	96	41.577	Ovis_aries
ENSCSAVG00000000783	-	98	43.369	ENSPPAG00000028729	ALKBH3	96	43.369	Pan_paniscus
ENSCSAVG00000000783	-	98	42.909	ENSPPRG00000005278	ALKBH3	96	42.909	Panthera_pardus
ENSCSAVG00000000783	-	98	41.818	ENSPTIG00000019393	ALKBH3	96	41.818	Panthera_tigris_altaica
ENSCSAVG00000000783	-	98	43.369	ENSPTRG00000003523	ALKBH3	96	43.369	Pan_troglodytes
ENSCSAVG00000000783	-	97	41.071	ENSPANG00000003104	ALKBH3	95	41.071	Papio_anubis
ENSCSAVG00000000783	-	99	44.170	ENSPKIG00000021815	alkbh3	98	41.887	Paramormyrops_kingsleyae
ENSCSAVG00000000783	-	81	39.738	ENSPSIG00000011933	ALKBH3	96	39.738	Pelodiscus_sinensis
ENSCSAVG00000000783	-	98	41.455	ENSPMGG00000008862	alkbh3	92	41.091	Periophthalmus_magnuspinnatus
ENSCSAVG00000000783	-	98	43.772	ENSPEMG00000019372	Alkbh3	96	44.128	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000783	-	89	41.107	ENSPMAG00000001119	alkbh3	99	41.107	Petromyzon_marinus
ENSCSAVG00000000783	-	97	42.545	ENSPCIG00000021794	ALKBH3	94	42.545	Phascolarctos_cinereus
ENSCSAVG00000000783	-	98	45.357	ENSPFOG00000002705	alkbh3	93	45.357	Poecilia_formosa
ENSCSAVG00000000783	-	98	45.357	ENSPLAG00000002355	alkbh3	93	45.357	Poecilia_latipinna
ENSCSAVG00000000783	-	98	45.000	ENSPMEG00000004476	alkbh3	93	45.000	Poecilia_mexicana
ENSCSAVG00000000783	-	99	44.876	ENSPREG00000005505	alkbh3	89	44.876	Poecilia_reticulata
ENSCSAVG00000000783	-	98	42.705	ENSPPYG00000003342	ALKBH3	94	42.705	Pongo_abelii
ENSCSAVG00000000783	-	98	42.599	ENSPCAG00000002955	ALKBH3	97	42.599	Procavia_capensis
ENSCSAVG00000000783	-	98	42.336	ENSPCOG00000020139	ALKBH3	96	42.336	Propithecus_coquereli
ENSCSAVG00000000783	-	98	40.830	ENSPVAG00000011569	ALKBH3	96	40.830	Pteropus_vampyrus
ENSCSAVG00000000783	-	98	45.552	ENSPNYG00000010362	alkbh3	93	45.552	Pundamilia_nyererei
ENSCSAVG00000000783	-	98	45.455	ENSPNAG00000015943	alkbh3	93	45.455	Pygocentrus_nattereri
ENSCSAVG00000000783	-	98	42.182	ENSRNOG00000021678	Alkbh3	93	42.182	Rattus_norvegicus
ENSCSAVG00000000783	-	98	42.652	ENSRBIG00000034161	ALKBH3	97	42.652	Rhinopithecus_bieti
ENSCSAVG00000000783	-	98	43.369	ENSRROG00000042173	ALKBH3	97	43.369	Rhinopithecus_roxellana
ENSCSAVG00000000783	-	98	42.756	ENSSBOG00000023947	ALKBH3	97	42.756	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000783	-	97	42.182	ENSSHAG00000006189	ALKBH3	95	42.182	Sarcophilus_harrisii
ENSCSAVG00000000783	-	99	43.772	ENSSFOG00015003566	alkbh3	97	43.772	Scleropages_formosus
ENSCSAVG00000000783	-	98	43.662	ENSSMAG00000004404	alkbh3	93	43.662	Scophthalmus_maximus
ENSCSAVG00000000783	-	98	45.196	ENSSDUG00000000513	alkbh3	93	45.196	Seriola_dumerili
ENSCSAVG00000000783	-	97	45.000	ENSSLDG00000003080	alkbh3	92	45.000	Seriola_lalandi_dorsalis
ENSCSAVG00000000783	-	98	44.964	ENSSPUG00000005861	ALKBH3	96	44.964	Sphenodon_punctatus
ENSCSAVG00000000783	-	98	42.361	ENSSPAG00000020713	alkbh3	92	42.361	Stegastes_partitus
ENSCSAVG00000000783	-	98	41.935	ENSSSCG00000040937	ALKBH3	96	41.935	Sus_scrofa
ENSCSAVG00000000783	-	86	45.902	ENSTGUG00000010222	ALKBH3	97	45.902	Taeniopygia_guttata
ENSCSAVG00000000783	-	97	43.972	ENSTRUG00000021459	alkbh3	83	43.972	Takifugu_rubripes
ENSCSAVG00000000783	-	99	45.196	ENSTNIG00000010385	alkbh3	93	45.683	Tetraodon_nigroviridis
ENSCSAVG00000000783	-	98	44.086	ENSTBEG00000016697	ALKBH3	97	44.086	Tupaia_belangeri
ENSCSAVG00000000783	-	98	41.577	ENSTTRG00000005121	ALKBH3	96	41.577	Tursiops_truncatus
ENSCSAVG00000000783	-	98	40.214	ENSUAMG00000025129	ALKBH3	89	47.926	Ursus_americanus
ENSCSAVG00000000783	-	98	40.830	ENSUMAG00000015602	ALKBH3	96	41.577	Ursus_maritimus
ENSCSAVG00000000783	-	98	42.182	ENSVPAG00000000215	ALKBH3	96	42.182	Vicugna_pacos
ENSCSAVG00000000783	-	98	41.219	ENSVVUG00000017283	ALKBH3	95	41.577	Vulpes_vulpes
ENSCSAVG00000000783	-	98	39.643	ENSXETG00000022230	alkbh3	98	40.357	Xenopus_tropicalis
ENSCSAVG00000000783	-	60	50.595	ENSXCOG00000000737	alkbh3	66	50.595	Xiphophorus_couchianus
ENSCSAVG00000000783	-	99	44.128	ENSXMAG00000013123	alkbh3	94	44.128	Xiphophorus_maculatus