EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000850 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 19192 bases
Position: chrreftig_55:695891-715082
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001495	Xpo1	PF08389.12	1.3e-15	1	1
ENSCSAVP00000001494	Xpo1	PF08389.12	1.3e-15	1	1
ENSCSAVP00000001495	IBN_N	PF03810.19	1.8e-08	1	1
ENSCSAVP00000001494	IBN_N	PF03810.19	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001515	-	3810	-	ENSCSAVP00000001495	1141 (aa)	-	H2Y847
ENSCSAVT00000001514	-	3613	-	ENSCSAVP00000001494	1190 (aa)	-	H2Y846

Gene Model

Click here to download ENSCSAVG00000000850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000850	-	99	45.969	ENSG00000169180	XPO6	100	58.621	Homo_sapiens
ENSCSAVG00000000850	-	99	43.990	ENSAPOG00000012873	xpo6	99	43.990	Acanthochromis_polyacanthus
ENSCSAVG00000000850	-	99	45.969	ENSAMEG00000011014	XPO6	100	45.969	Ailuropoda_melanoleuca
ENSCSAVG00000000850	-	99	44.531	ENSACIG00000008055	xpo6	99	44.531	Amphilophus_citrinellus
ENSCSAVG00000000850	-	100	44.435	ENSAOCG00000001326	xpo6	99	44.435	Amphiprion_ocellaris
ENSCSAVG00000000850	-	100	44.435	ENSAPEG00000016304	xpo6	99	44.435	Amphiprion_percula
ENSCSAVG00000000850	-	99	44.176	ENSATEG00000002273	xpo6	99	44.176	Anabas_testudineus
ENSCSAVG00000000850	-	100	45.722	ENSAPLG00000007480	XPO6	100	45.722	Anas_platyrhynchos
ENSCSAVG00000000850	-	99	42.132	ENSACAG00000016883	XPO6	99	42.132	Anolis_carolinensis
ENSCSAVG00000000850	-	99	46.107	ENSANAG00000031761	XPO6	99	46.107	Aotus_nancymaae
ENSCSAVG00000000850	-	99	44.387	ENSACLG00000007048	xpo6	99	44.387	Astatotilapia_calliptera
ENSCSAVG00000000850	-	99	42.281	ENSAMXG00000032539	xpo6	99	42.882	Astyanax_mexicanus
ENSCSAVG00000000850	-	99	45.969	ENSBTAG00000010309	XPO6	99	45.969	Bos_taurus
ENSCSAVG00000000850	-	99	45.883	ENSCJAG00000006014	XPO6	99	45.883	Callithrix_jacchus
ENSCSAVG00000000850	-	99	45.969	ENSCAFG00000017356	XPO6	100	45.969	Canis_familiaris
ENSCSAVG00000000850	-	99	45.969	ENSCAFG00020011808	XPO6	100	45.105	Canis_lupus_dingo
ENSCSAVG00000000850	-	99	46.141	ENSCHIG00000022341	XPO6	99	46.141	Capra_hircus
ENSCSAVG00000000850	-	99	44.282	ENSTSYG00000012249	XPO6	99	44.282	Carlito_syrichta
ENSCSAVG00000000850	-	99	45.626	ENSCPOG00000012824	XPO6	99	45.626	Cavia_porcellus
ENSCSAVG00000000850	-	99	46.194	ENSCCAG00000036360	XPO6	99	46.194	Cebus_capucinus
ENSCSAVG00000000850	-	99	45.969	ENSCATG00000034030	XPO6	99	45.969	Cercocebus_atys
ENSCSAVG00000000850	-	100	45.587	ENSCLAG00000012270	XPO6	100	45.626	Chinchilla_lanigera
ENSCSAVG00000000850	-	91	50.246	ENSCHOG00000004369	XPO6	91	50.246	Choloepus_hoffmanni
ENSCSAVG00000000850	-	87	43.830	ENSCPBG00000024660	XPO6	96	50.676	Chrysemys_picta_bellii
ENSCSAVG00000000850	-	99	78.897	ENSCING00000006884	-	99	78.897	Ciona_intestinalis
ENSCSAVG00000000850	-	99	45.883	ENSCANG00000041578	XPO6	99	45.883	Colobus_angolensis_palliatus
ENSCSAVG00000000850	-	99	46.672	ENSCGRG00001013173	Xpo6	99	46.672	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000850	-	99	43.869	ENSCSEG00000013622	xpo6	99	43.869	Cynoglossus_semilaevis
ENSCSAVG00000000850	-	99	43.418	ENSCVAG00000017399	xpo6	100	43.766	Cyprinodon_variegatus
ENSCSAVG00000000850	-	97	41.961	ENSDARG00000041217	xpo6	99	42.668	Danio_rerio
ENSCSAVG00000000850	-	99	46.226	ENSDNOG00000012449	XPO6	99	46.226	Dasypus_novemcinctus
ENSCSAVG00000000850	-	99	46.484	ENSDORG00000000919	Xpo6	99	46.484	Dipodomys_ordii
ENSCSAVG00000000850	-	82	48.669	ENSETEG00000018768	XPO6	84	48.669	Echinops_telfairi
ENSCSAVG00000000850	-	99	41.263	ENSEBUG00000015560	xpo6	99	41.263	Eptatretus_burgeri
ENSCSAVG00000000850	-	99	45.969	ENSEASG00005017296	XPO6	99	45.969	Equus_asinus_asinus
ENSCSAVG00000000850	-	99	45.969	ENSECAG00000008601	XPO6	99	45.969	Equus_caballus
ENSCSAVG00000000850	-	91	51.860	ENSEEUG00000014587	XPO6	97	51.860	Erinaceus_europaeus
ENSCSAVG00000000850	-	99	44.406	ENSELUG00000009159	xpo6	99	44.406	Esox_lucius
ENSCSAVG00000000850	-	99	45.798	ENSFCAG00000010309	XPO6	99	45.798	Felis_catus
ENSCSAVG00000000850	-	100	45.941	ENSFALG00000004441	XPO6	98	45.941	Ficedula_albicollis
ENSCSAVG00000000850	-	99	45.761	ENSFDAG00000012689	XPO6	100	45.761	Fukomys_damarensis
ENSCSAVG00000000850	-	100	44.406	ENSFHEG00000021190	xpo6	99	44.406	Fundulus_heteroclitus
ENSCSAVG00000000850	-	99	45.675	ENSGALG00000035360	XPO6	99	45.675	Gallus_gallus
ENSCSAVG00000000850	-	100	43.900	ENSGAFG00000004044	xpo6	99	44.397	Gambusia_affinis
ENSCSAVG00000000850	-	95	44.586	ENSGAGG00000022738	XPO6	100	45.223	Gopherus_agassizii
ENSCSAVG00000000850	-	99	45.969	ENSGGOG00000005609	XPO6	99	46.194	Gorilla_gorilla
ENSCSAVG00000000850	-	99	44.010	ENSHBUG00000019504	xpo6	99	44.075	Haplochromis_burtoni
ENSCSAVG00000000850	-	99	46.160	ENSHGLG00000009679	-	99	46.160	Heterocephalus_glaber_female
ENSCSAVG00000000850	-	83	44.713	ENSHGLG00000003865	-	95	44.713	Heterocephalus_glaber_female
ENSCSAVG00000000850	-	91	39.952	ENSHGLG00100001081	-	98	40.988	Heterocephalus_glaber_male
ENSCSAVG00000000850	-	99	46.160	ENSHGLG00100003673	-	99	46.160	Heterocephalus_glaber_male
ENSCSAVG00000000850	-	99	44.302	ENSHCOG00000004987	xpo6	99	44.264	Hippocampus_comes
ENSCSAVG00000000850	-	99	42.906	ENSIPUG00000006516	xpo6	99	42.906	Ictalurus_punctatus
ENSCSAVG00000000850	-	99	46.141	ENSSTOG00000012161	XPO6	99	46.141	Ictidomys_tridecemlineatus
ENSCSAVG00000000850	-	99	45.798	ENSJJAG00000019392	Xpo6	99	45.798	Jaculus_jaculus
ENSCSAVG00000000850	-	99	43.772	ENSKMAG00000010403	xpo6	99	43.772	Kryptolebias_marmoratus
ENSCSAVG00000000850	-	99	43.652	ENSLBEG00000023039	xpo6	99	43.652	Labrus_bergylta
ENSCSAVG00000000850	-	99	45.790	ENSLACG00000017930	XPO6	99	45.790	Latimeria_chalumnae
ENSCSAVG00000000850	-	94	44.628	ENSLOCG00000003304	xpo6	100	44.628	Lepisosteus_oculatus
ENSCSAVG00000000850	-	99	45.455	ENSLAFG00000011960	XPO6	98	49.610	Loxodonta_africana
ENSCSAVG00000000850	-	99	45.969	ENSMFAG00000045067	XPO6	99	45.969	Macaca_fascicularis
ENSCSAVG00000000850	-	99	45.969	ENSMMUG00000018623	XPO6	99	45.969	Macaca_mulatta
ENSCSAVG00000000850	-	99	45.969	ENSMNEG00000028587	XPO6	99	45.969	Macaca_nemestrina
ENSCSAVG00000000850	-	99	45.969	ENSMLEG00000029685	XPO6	99	45.969	Mandrillus_leucophaeus
ENSCSAVG00000000850	-	99	44.251	ENSMAMG00000001351	xpo6	100	44.251	Mastacembelus_armatus
ENSCSAVG00000000850	-	99	44.473	ENSMZEG00005010620	xpo6	99	44.473	Maylandia_zebra
ENSCSAVG00000000850	-	97	44.818	ENSMGAG00000009566	XPO6	100	44.818	Meleagris_gallopavo
ENSCSAVG00000000850	-	99	42.261	ENSMAUG00000012539	Xpo6	99	42.696	Mesocricetus_auratus
ENSCSAVG00000000850	-	99	46.226	ENSMICG00000001923	XPO6	99	46.226	Microcebus_murinus
ENSCSAVG00000000850	-	99	46.592	ENSMOCG00000008015	Xpo6	99	46.592	Microtus_ochrogaster
ENSCSAVG00000000850	-	99	44.397	ENSMMOG00000011992	xpo6	99	44.397	Mola_mola
ENSCSAVG00000000850	-	99	46.540	ENSMODG00000015516	XPO6	99	46.540	Monodelphis_domestica
ENSCSAVG00000000850	-	99	40.555	ENSMALG00000020612	xpo6	99	40.744	Monopterus_albus
ENSCSAVG00000000850	-	99	46.672	MGP_CAROLIEiJ_G0030439	Xpo6	99	49.223	Mus_caroli
ENSCSAVG00000000850	-	99	46.453	ENSMUSG00000000131	Xpo6	99	46.453	Mus_musculus
ENSCSAVG00000000850	-	99	46.453	MGP_PahariEiJ_G0013649	Xpo6	99	46.453	Mus_pahari
ENSCSAVG00000000850	-	99	46.713	MGP_SPRETEiJ_G0031553	Xpo6	99	46.713	Mus_spretus
ENSCSAVG00000000850	-	100	45.416	ENSMPUG00000012920	XPO6	98	45.635	Mustela_putorius_furo
ENSCSAVG00000000850	-	99	45.798	ENSMLUG00000012970	XPO6	100	45.798	Myotis_lucifugus
ENSCSAVG00000000850	-	99	46.453	ENSNGAG00000012740	Xpo6	99	46.453	Nannospalax_galili
ENSCSAVG00000000850	-	99	44.010	ENSNBRG00000007275	xpo6	99	44.075	Neolamprologus_brichardi
ENSCSAVG00000000850	-	99	45.969	ENSNLEG00000011518	XPO6	99	45.969	Nomascus_leucogenys
ENSCSAVG00000000850	-	81	51.351	ENSOPRG00000009278	XPO6	80	51.351	Ochotona_princeps
ENSCSAVG00000000850	-	99	45.540	ENSODEG00000012917	XPO6	99	45.540	Octodon_degus
ENSCSAVG00000000850	-	99	43.819	ENSONIG00000019366	xpo6	99	44.037	Oreochromis_niloticus
ENSCSAVG00000000850	-	99	45.969	ENSOCUG00000002727	XPO6	100	45.969	Oryctolagus_cuniculus
ENSCSAVG00000000850	-	99	43.511	ENSORLG00000011231	xpo6	100	43.997	Oryzias_latipes
ENSCSAVG00000000850	-	99	44.166	ENSORLG00020000386	xpo6	99	44.190	Oryzias_latipes_hni
ENSCSAVG00000000850	-	99	43.936	ENSORLG00015003636	xpo6	99	44.020	Oryzias_latipes_hsok
ENSCSAVG00000000850	-	99	44.123	ENSOMEG00000016505	xpo6	100	44.003	Oryzias_melastigma
ENSCSAVG00000000850	-	99	46.055	ENSOGAG00000012844	XPO6	100	46.055	Otolemur_garnettii
ENSCSAVG00000000850	-	99	46.141	ENSOARG00000000960	XPO6	100	46.141	Ovis_aries
ENSCSAVG00000000850	-	99	45.969	ENSPPAG00000033668	XPO6	99	45.969	Pan_paniscus
ENSCSAVG00000000850	-	99	45.707	ENSPPRG00000001454	XPO6	100	45.707	Panthera_pardus
ENSCSAVG00000000850	-	96	45.164	ENSPTIG00000016663	XPO6	99	45.164	Panthera_tigris_altaica
ENSCSAVG00000000850	-	99	45.969	ENSPTRG00000007919	XPO6	99	45.969	Pan_troglodytes
ENSCSAVG00000000850	-	99	45.969	ENSPANG00000017103	XPO6	99	45.969	Papio_anubis
ENSCSAVG00000000850	-	99	44.675	ENSPKIG00000022550	xpo6	99	44.675	Paramormyrops_kingsleyae
ENSCSAVG00000000850	-	99	45.066	ENSPSIG00000018225	XPO6	100	45.066	Pelodiscus_sinensis
ENSCSAVG00000000850	-	99	43.913	ENSPMGG00000014436	xpo6	100	43.913	Periophthalmus_magnuspinnatus
ENSCSAVG00000000850	-	99	46.845	ENSPEMG00000012100	Xpo6	98	50.831	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000850	-	100	44.789	ENSPMAG00000003127	xpo6	100	44.789	Petromyzon_marinus
ENSCSAVG00000000850	-	97	45.859	ENSPCIG00000003863	XPO6	100	45.670	Phascolarctos_cinereus
ENSCSAVG00000000850	-	99	44.674	ENSPFOG00000008763	xpo6	99	44.588	Poecilia_formosa
ENSCSAVG00000000850	-	100	43.669	ENSPLAG00000014054	xpo6	99	44.226	Poecilia_latipinna
ENSCSAVG00000000850	-	100	43.842	ENSPMEG00000018994	xpo6	99	44.140	Poecilia_mexicana
ENSCSAVG00000000850	-	97	43.810	ENSPREG00000016421	xpo6	96	43.810	Poecilia_reticulata
ENSCSAVG00000000850	-	99	45.883	ENSPPYG00000007218	XPO6	99	45.883	Pongo_abelii
ENSCSAVG00000000850	-	90	48.295	ENSPCAG00000008918	XPO6	87	51.402	Procavia_capensis
ENSCSAVG00000000850	-	99	46.141	ENSPCOG00000017886	XPO6	99	46.141	Propithecus_coquereli
ENSCSAVG00000000850	-	79	58.824	ENSPVAG00000012234	XPO6	80	59.420	Pteropus_vampyrus
ENSCSAVG00000000850	-	99	44.444	ENSPNYG00000008375	xpo6	99	44.444	Pundamilia_nyererei
ENSCSAVG00000000850	-	99	42.341	ENSPNAG00000008284	xpo6	99	43.029	Pygocentrus_nattereri
ENSCSAVG00000000850	-	99	46.280	ENSRNOG00000016722	Xpo6	98	48.964	Rattus_norvegicus
ENSCSAVG00000000850	-	99	46.055	ENSRBIG00000031469	XPO6	99	46.055	Rhinopithecus_bieti
ENSCSAVG00000000850	-	99	46.055	ENSRROG00000044864	XPO6	99	46.055	Rhinopithecus_roxellana
ENSCSAVG00000000850	-	99	46.194	ENSSBOG00000027650	XPO6	99	46.194	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000850	-	99	46.367	ENSSHAG00000013864	XPO6	99	46.367	Sarcophilus_harrisii
ENSCSAVG00000000850	-	99	44.028	ENSSFOG00015009347	xpo6	99	44.028	Scleropages_formosus
ENSCSAVG00000000850	-	99	43.750	ENSSMAG00000010566	xpo6	99	43.750	Scophthalmus_maximus
ENSCSAVG00000000850	-	99	43.846	ENSSDUG00000017294	xpo6	99	43.990	Seriola_dumerili
ENSCSAVG00000000850	-	99	43.846	ENSSLDG00000006580	xpo6	99	43.990	Seriola_lalandi_dorsalis
ENSCSAVG00000000850	-	93	47.727	ENSSARG00000013120	XPO6	93	49.091	Sorex_araneus
ENSCSAVG00000000850	-	99	45.588	ENSSPUG00000009217	XPO6	100	49.231	Sphenodon_punctatus
ENSCSAVG00000000850	-	99	44.328	ENSSPAG00000009469	xpo6	99	44.328	Stegastes_partitus
ENSCSAVG00000000850	-	99	46.055	ENSSSCG00000007812	XPO6	99	46.055	Sus_scrofa
ENSCSAVG00000000850	-	85	44.625	ENSTGUG00000003781	XPO6	98	44.625	Taeniopygia_guttata
ENSCSAVG00000000850	-	99	43.493	ENSTRUG00000004696	xpo6	99	43.493	Takifugu_rubripes
ENSCSAVG00000000850	-	100	43.478	ENSTNIG00000018949	xpo6	100	43.149	Tetraodon_nigroviridis
ENSCSAVG00000000850	-	92	60.448	ENSTBEG00000009945	XPO6	92	60.448	Tupaia_belangeri
ENSCSAVG00000000850	-	99	45.876	ENSTTRG00000009558	XPO6	100	45.876	Tursiops_truncatus
ENSCSAVG00000000850	-	99	44.935	ENSUMAG00000007086	XPO6	100	44.935	Ursus_maritimus
ENSCSAVG00000000850	-	91	58.824	ENSVPAG00000008493	XPO6	93	58.824	Vicugna_pacos
ENSCSAVG00000000850	-	99	45.969	ENSVVUG00000024150	XPO6	99	45.969	Vulpes_vulpes
ENSCSAVG00000000850	-	100	44.828	ENSXETG00000010326	xpo6	100	44.828	Xenopus_tropicalis
ENSCSAVG00000000850	-	99	44.274	ENSXMAG00000011630	xpo6	99	44.274	Xiphophorus_maculatus