EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000861 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2364 bases
Position: chrreftig_85:77381-79744
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001510	S1	PF00575.23	2.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001530	-	2229	-	ENSCSAVP00000001510	743 (aa)	-	H2Y862

Gene Model

Click here to download ENSCSAVG00000000861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000861	-	99	42.947	ENSG00000068784	SRBD1	79	42.947	Homo_sapiens
ENSCSAVG00000000861	-	99	42.569	ENSAPOG00000005103	si:ch211-117n7.8	79	42.569	Acanthochromis_polyacanthus
ENSCSAVG00000000861	-	99	43.253	ENSAMEG00000005993	SRBD1	80	43.253	Ailuropoda_melanoleuca
ENSCSAVG00000000861	-	99	41.919	ENSACIG00000009875	si:ch211-117n7.8	80	42.045	Amphilophus_citrinellus
ENSCSAVG00000000861	-	99	41.992	ENSAOCG00000024718	si:ch211-117n7.8	79	41.992	Amphiprion_ocellaris
ENSCSAVG00000000861	-	99	42.371	ENSAPEG00000002645	si:ch211-117n7.8	82	42.371	Amphiprion_percula
ENSCSAVG00000000861	-	99	42.497	ENSATEG00000010844	si:ch211-117n7.8	79	42.497	Anabas_testudineus
ENSCSAVG00000000861	-	99	43.719	ENSAPLG00000006313	SRBD1	80	43.719	Anas_platyrhynchos
ENSCSAVG00000000861	-	99	43.199	ENSANAG00000025573	SRBD1	79	43.199	Aotus_nancymaae
ENSCSAVG00000000861	-	99	41.562	ENSACLG00000024219	si:ch211-117n7.8	77	41.562	Astatotilapia_calliptera
ENSCSAVG00000000861	-	99	43.110	ENSAMXG00000004294	SRBD1	79	43.110	Astyanax_mexicanus
ENSCSAVG00000000861	-	99	43.444	ENSBTAG00000007508	SRBD1	78	43.444	Bos_taurus
ENSCSAVG00000000861	-	99	43.073	ENSCJAG00000000727	SRBD1	79	43.073	Callithrix_jacchus
ENSCSAVG00000000861	-	99	42.714	ENSCAFG00000002554	SRBD1	80	42.714	Canis_familiaris
ENSCSAVG00000000861	-	99	43.282	ENSCAFG00020026284	SRBD1	92	43.282	Canis_lupus_dingo
ENSCSAVG00000000861	-	99	42.588	ENSCHIG00000016535	SRBD1	78	42.588	Capra_hircus
ENSCSAVG00000000861	-	99	42.785	ENSTSYG00000012797	SRBD1	79	42.785	Carlito_syrichta
ENSCSAVG00000000861	-	99	43.223	ENSCPOG00000004773	SRBD1	80	43.223	Cavia_porcellus
ENSCSAVG00000000861	-	99	43.325	ENSCCAG00000025589	SRBD1	79	43.325	Cebus_capucinus
ENSCSAVG00000000861	-	99	42.695	ENSCATG00000039530	SRBD1	79	42.695	Cercocebus_atys
ENSCSAVG00000000861	-	99	43.990	ENSCLAG00000008623	SRBD1	80	43.990	Chinchilla_lanigera
ENSCSAVG00000000861	-	99	42.695	ENSCSAG00000013350	SRBD1	79	42.695	Chlorocebus_sabaeus
ENSCSAVG00000000861	-	69	70.270	ENSCHOG00000003805	SRBD1	53	70.270	Choloepus_hoffmanni
ENSCSAVG00000000861	-	99	43.001	ENSCPBG00000005677	SRBD1	80	43.001	Chrysemys_picta_bellii
ENSCSAVG00000000861	-	99	61.089	ENSCING00000005950	-	100	61.089	Ciona_intestinalis
ENSCSAVG00000000861	-	99	42.695	ENSCANG00000016307	SRBD1	79	42.695	Colobus_angolensis_palliatus
ENSCSAVG00000000861	-	99	43.567	ENSCGRG00001000513	Srbd1	79	43.567	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000861	-	99	43.567	ENSCGRG00000002283	Srbd1	79	43.567	Cricetulus_griseus_crigri
ENSCSAVG00000000861	-	99	41.110	ENSCSEG00000000856	si:ch211-117n7.8	79	41.614	Cynoglossus_semilaevis
ENSCSAVG00000000861	-	99	42.803	ENSCVAG00000020212	si:ch211-117n7.8	84	42.803	Cyprinodon_variegatus
ENSCSAVG00000000861	-	99	42.732	ENSDNOG00000018686	SRBD1	79	42.732	Dasypus_novemcinctus
ENSCSAVG00000000861	-	99	43.511	ENSDORG00000010468	Srbd1	80	43.511	Dipodomys_ordii
ENSCSAVG00000000861	-	99	37.066	FBgn0051156	CG31156	80	37.194	Drosophila_melanogaster
ENSCSAVG00000000861	-	87	41.924	ENSETEG00000000739	SRBD1	72	41.924	Echinops_telfairi
ENSCSAVG00000000861	-	90	38.781	ENSEBUG00000008902	si:ch211-117n7.8	96	38.781	Eptatretus_burgeri
ENSCSAVG00000000861	-	99	41.258	ENSEASG00005003132	SRBD1	94	42.303	Equus_asinus_asinus
ENSCSAVG00000000861	-	99	42.893	ENSECAG00000013865	SRBD1	78	42.893	Equus_caballus
ENSCSAVG00000000861	-	99	42.099	ENSELUG00000012592	si:ch211-117n7.8	76	42.351	Esox_lucius
ENSCSAVG00000000861	-	99	42.893	ENSFCAG00000005101	SRBD1	79	42.893	Felis_catus
ENSCSAVG00000000861	-	99	43.822	ENSFALG00000012966	SRBD1	80	43.822	Ficedula_albicollis
ENSCSAVG00000000861	-	99	43.984	ENSFDAG00000016670	SRBD1	80	43.984	Fukomys_damarensis
ENSCSAVG00000000861	-	99	42.191	ENSFHEG00000019480	si:ch211-117n7.8	77	42.191	Fundulus_heteroclitus
ENSCSAVG00000000861	-	52	39.623	ENSGMOG00000018010	-	88	39.623	Gadus_morhua
ENSCSAVG00000000861	-	99	43.489	ENSGALG00000009990	SRBD1	80	43.489	Gallus_gallus
ENSCSAVG00000000861	-	99	42.405	ENSGAFG00000019664	si:ch211-117n7.8	79	42.532	Gambusia_affinis
ENSCSAVG00000000861	-	76	42.971	ENSGACG00000010794	si:ch211-117n7.8	99	42.971	Gasterosteus_aculeatus
ENSCSAVG00000000861	-	99	43.001	ENSGAGG00000006166	SRBD1	95	43.001	Gopherus_agassizii
ENSCSAVG00000000861	-	99	42.821	ENSGGOG00000005910	SRBD1	82	42.821	Gorilla_gorilla
ENSCSAVG00000000861	-	90	40.112	ENSHBUG00000013207	si:ch211-117n7.8	76	40.112	Haplochromis_burtoni
ENSCSAVG00000000861	-	99	43.766	ENSHGLG00000018153	-	80	43.766	Heterocephalus_glaber_female
ENSCSAVG00000000861	-	99	43.766	ENSHGLG00100015183	-	80	43.766	Heterocephalus_glaber_male
ENSCSAVG00000000861	-	99	43.295	ENSIPUG00000009661	srbd1	79	43.295	Ictalurus_punctatus
ENSCSAVG00000000861	-	99	43.439	ENSSTOG00000005898	SRBD1	80	43.439	Ictidomys_tridecemlineatus
ENSCSAVG00000000861	-	99	42.930	ENSJJAG00000022244	Srbd1	79	42.930	Jaculus_jaculus
ENSCSAVG00000000861	-	99	41.992	ENSKMAG00000003473	si:ch211-117n7.8	78	41.992	Kryptolebias_marmoratus
ENSCSAVG00000000861	-	99	41.952	ENSLBEG00000027518	si:ch211-117n7.8	77	41.952	Labrus_bergylta
ENSCSAVG00000000861	-	99	43.090	ENSLACG00000009790	SRBD1	93	43.090	Latimeria_chalumnae
ENSCSAVG00000000861	-	99	44.347	ENSLOCG00000016360	si:ch211-117n7.8	80	44.347	Lepisosteus_oculatus
ENSCSAVG00000000861	-	99	42.695	ENSMFAG00000042026	SRBD1	79	42.695	Macaca_fascicularis
ENSCSAVG00000000861	-	99	42.695	ENSMMUG00000003490	SRBD1	79	42.695	Macaca_mulatta
ENSCSAVG00000000861	-	99	41.635	ENSMNEG00000034701	SRBD1	79	41.635	Macaca_nemestrina
ENSCSAVG00000000861	-	99	42.695	ENSMLEG00000000745	SRBD1	79	42.695	Mandrillus_leucophaeus
ENSCSAVG00000000861	-	99	42.478	ENSMAMG00000021921	si:ch211-117n7.8	79	42.478	Mastacembelus_armatus
ENSCSAVG00000000861	-	99	41.436	ENSMZEG00005027369	si:ch211-117n7.8	77	41.562	Maylandia_zebra
ENSCSAVG00000000861	-	99	39.951	ENSMGAG00000010273	SRBD1	99	39.951	Meleagris_gallopavo
ENSCSAVG00000000861	-	99	41.430	ENSMAUG00000013916	Srbd1	97	41.430	Mesocricetus_auratus
ENSCSAVG00000000861	-	99	42.821	ENSMICG00000007835	SRBD1	79	42.821	Microcebus_murinus
ENSCSAVG00000000861	-	99	44.204	ENSMOCG00000018716	Srbd1	79	44.204	Microtus_ochrogaster
ENSCSAVG00000000861	-	99	42.390	ENSMMOG00000007507	si:ch211-117n7.8	83	42.390	Mola_mola
ENSCSAVG00000000861	-	99	41.162	ENSMALG00000001562	si:ch211-117n7.8	78	41.162	Monopterus_albus
ENSCSAVG00000000861	-	99	44.076	MGP_CAROLIEiJ_G0021934	Srbd1	99	41.118	Mus_caroli
ENSCSAVG00000000861	-	99	43.949	ENSMUSG00000024135	Srbd1	95	38.060	Mus_musculus
ENSCSAVG00000000861	-	99	44.076	MGP_PahariEiJ_G0020924	Srbd1	80	44.076	Mus_pahari
ENSCSAVG00000000861	-	99	43.822	MGP_SPRETEiJ_G0022850	Srbd1	80	43.822	Mus_spretus
ENSCSAVG00000000861	-	99	42.839	ENSMLUG00000007039	SRBD1	79	42.839	Myotis_lucifugus
ENSCSAVG00000000861	-	99	42.331	ENSNGAG00000011893	Srbd1	80	42.331	Nannospalax_galili
ENSCSAVG00000000861	-	99	40.868	ENSNBRG00000012873	si:ch211-117n7.8	80	40.868	Neolamprologus_brichardi
ENSCSAVG00000000861	-	99	42.821	ENSNLEG00000016877	SRBD1	79	42.821	Nomascus_leucogenys
ENSCSAVG00000000861	-	99	42.894	ENSODEG00000012095	SRBD1	81	42.894	Octodon_degus
ENSCSAVG00000000861	-	99	41.646	ENSONIG00000000945	si:ch211-117n7.8	94	41.772	Oreochromis_niloticus
ENSCSAVG00000000861	-	99	42.893	ENSOCUG00000015385	SRBD1	80	42.893	Oryctolagus_cuniculus
ENSCSAVG00000000861	-	99	38.734	ENSORLG00000004427	si:ch211-117n7.8	76	38.734	Oryzias_latipes
ENSCSAVG00000000861	-	99	40.834	ENSORLG00020012792	si:ch211-117n7.8	77	40.834	Oryzias_latipes_hni
ENSCSAVG00000000861	-	99	40.708	ENSORLG00015018598	si:ch211-117n7.8	77	40.708	Oryzias_latipes_hsok
ENSCSAVG00000000861	-	99	42.420	ENSOMEG00000012229	si:ch211-117n7.8	77	42.420	Oryzias_melastigma
ENSCSAVG00000000861	-	99	41.761	ENSOGAG00000001076	SRBD1	80	41.761	Otolemur_garnettii
ENSCSAVG00000000861	-	99	39.591	ENSOARG00000005958	SRBD1	80	39.591	Ovis_aries
ENSCSAVG00000000861	-	99	42.695	ENSPPAG00000038442	SRBD1	79	42.821	Pan_paniscus
ENSCSAVG00000000861	-	99	42.947	ENSPPRG00000003449	SRBD1	79	42.947	Panthera_pardus
ENSCSAVG00000000861	-	99	43.073	ENSPTIG00000012495	SRBD1	79	43.073	Panthera_tigris_altaica
ENSCSAVG00000000861	-	99	42.695	ENSPTRG00000011889	SRBD1	79	42.821	Pan_troglodytes
ENSCSAVG00000000861	-	99	42.695	ENSPANG00000008063	SRBD1	79	42.695	Papio_anubis
ENSCSAVG00000000861	-	99	43.059	ENSPKIG00000021973	si:ch211-117n7.8	80	43.059	Paramormyrops_kingsleyae
ENSCSAVG00000000861	-	99	43.127	ENSPSIG00000008992	SRBD1	80	43.127	Pelodiscus_sinensis
ENSCSAVG00000000861	-	99	42.551	ENSPMGG00000013348	si:ch211-117n7.8	82	42.677	Periophthalmus_magnuspinnatus
ENSCSAVG00000000861	-	99	42.184	ENSPEMG00000020684	Srbd1	80	42.184	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000861	-	99	42.785	ENSPFOG00000010650	si:ch211-117n7.8	78	42.785	Poecilia_formosa
ENSCSAVG00000000861	-	99	42.658	ENSPLAG00000002141	si:ch211-117n7.8	78	42.658	Poecilia_latipinna
ENSCSAVG00000000861	-	99	42.785	ENSPMEG00000018537	si:ch211-117n7.8	78	42.785	Poecilia_mexicana
ENSCSAVG00000000861	-	99	41.688	ENSPREG00000003258	si:ch211-117n7.8	80	41.688	Poecilia_reticulata
ENSCSAVG00000000861	-	99	37.588	ENSPPYG00000012444	SRBD1	80	37.588	Pongo_abelii
ENSCSAVG00000000861	-	92	37.344	ENSPCAG00000005629	SRBD1	77	37.344	Procavia_capensis
ENSCSAVG00000000861	-	90	37.500	ENSPCOG00000017669	SRBD1	72	37.500	Propithecus_coquereli
ENSCSAVG00000000861	-	90	39.724	ENSPVAG00000001782	SRBD1	73	39.724	Pteropus_vampyrus
ENSCSAVG00000000861	-	99	40.637	ENSPNYG00000000508	si:ch211-117n7.8	80	40.637	Pundamilia_nyererei
ENSCSAVG00000000861	-	99	43.093	ENSPNAG00000013492	SRBD1	80	42.893	Pygocentrus_nattereri
ENSCSAVG00000000861	-	99	43.766	ENSRNOG00000014720	Srbd1	79	43.766	Rattus_norvegicus
ENSCSAVG00000000861	-	99	42.695	ENSRBIG00000033486	SRBD1	79	42.695	Rhinopithecus_bieti
ENSCSAVG00000000861	-	99	42.695	ENSRROG00000041599	SRBD1	79	42.695	Rhinopithecus_roxellana
ENSCSAVG00000000861	-	99	43.199	ENSSBOG00000024982	SRBD1	79	43.199	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000861	-	99	44.661	ENSSFOG00015001128	si:ch211-117n7.8	85	44.661	Scleropages_formosus
ENSCSAVG00000000861	-	99	42.045	ENSSMAG00000018256	si:ch211-117n7.8	77	42.045	Scophthalmus_maximus
ENSCSAVG00000000861	-	99	41.866	ENSSLDG00000023189	si:ch211-117n7.8	78	41.866	Seriola_lalandi_dorsalis
ENSCSAVG00000000861	-	99	40.253	ENSSARG00000009740	SRBD1	81	40.253	Sorex_araneus
ENSCSAVG00000000861	-	99	42.382	ENSSPUG00000010475	SRBD1	88	42.382	Sphenodon_punctatus
ENSCSAVG00000000861	-	99	39.824	ENSSPAG00000008092	-	79	40.327	Stegastes_partitus
ENSCSAVG00000000861	-	99	42.893	ENSSSCG00000008445	SRBD1	78	42.893	Sus_scrofa
ENSCSAVG00000000861	-	99	43.703	ENSTGUG00000003878	SRBD1	95	43.703	Taeniopygia_guttata
ENSCSAVG00000000861	-	99	42.712	ENSTRUG00000007080	si:ch211-117n7.8	87	42.712	Takifugu_rubripes
ENSCSAVG00000000861	-	99	42.643	ENSTNIG00000007464	si:ch211-117n7.8	78	42.643	Tetraodon_nigroviridis
ENSCSAVG00000000861	-	91	46.422	ENSTTRG00000011871	SRBD1	69	46.422	Tursiops_truncatus
ENSCSAVG00000000861	-	99	42.893	ENSUAMG00000008126	SRBD1	96	36.000	Ursus_americanus
ENSCSAVG00000000861	-	99	43.019	ENSUMAG00000012902	SRBD1	79	43.019	Ursus_maritimus
ENSCSAVG00000000861	-	99	42.821	ENSVPAG00000006825	SRBD1	87	42.821	Vicugna_pacos
ENSCSAVG00000000861	-	99	43.369	ENSVVUG00000005389	SRBD1	80	42.893	Vulpes_vulpes
ENSCSAVG00000000861	-	99	34.867	ENSXETG00000002760	srbd1	80	34.867	Xenopus_tropicalis
ENSCSAVG00000000861	-	99	42.532	ENSXMAG00000016861	si:ch211-117n7.8	78	42.532	Xiphophorus_maculatus