EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000872 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2828 bases
Position: chrreftig_162:265922-268749
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001522	PseudoU_synth_2	PF00849.22	8.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001542	-	1881	-	ENSCSAVP00000001522	515 (aa)	-	H2Y874

Gene Model

Click here to download ENSCSAVG00000000872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000872	-	54	42.806	ENSG00000165526	RPUSD4	71	42.806	Homo_sapiens
ENSCSAVG00000000872	-	63	36.474	ENSAPOG00000011024	rpusd4	80	36.474	Acanthochromis_polyacanthus
ENSCSAVG00000000872	-	54	42.806	ENSAMEG00000000127	-	71	42.806	Ailuropoda_melanoleuca
ENSCSAVG00000000872	-	62	36.810	ENSACIG00000003533	rpusd4	93	36.810	Amphilophus_citrinellus
ENSCSAVG00000000872	-	63	36.778	ENSAOCG00000015409	rpusd4	79	36.778	Amphiprion_ocellaris
ENSCSAVG00000000872	-	63	36.778	ENSAPEG00000018935	rpusd4	79	36.778	Amphiprion_percula
ENSCSAVG00000000872	-	54	41.577	ENSATEG00000008059	rpusd4	67	41.577	Anabas_testudineus
ENSCSAVG00000000872	-	54	41.007	ENSAPLG00000013250	RPUSD4	92	41.007	Anas_platyrhynchos
ENSCSAVG00000000872	-	62	38.558	ENSACAG00000000189	RPUSD4	84	38.558	Anolis_carolinensis
ENSCSAVG00000000872	-	54	43.525	ENSANAG00000024050	RPUSD4	72	43.525	Aotus_nancymaae
ENSCSAVG00000000872	-	53	41.455	ENSACLG00000020996	rpusd4	68	41.455	Astatotilapia_calliptera
ENSCSAVG00000000872	-	65	34.593	ENSAMXG00000031479	rpusd4	94	34.593	Astyanax_mexicanus
ENSCSAVG00000000872	-	54	42.806	ENSBTAG00000020900	RPUSD4	71	42.806	Bos_taurus
ENSCSAVG00000000872	-	54	43.165	ENSCJAG00000042850	RPUSD4	68	43.165	Callithrix_jacchus
ENSCSAVG00000000872	-	54	43.165	ENSCAFG00000010488	RPUSD4	71	43.165	Canis_familiaris
ENSCSAVG00000000872	-	54	43.165	ENSCAFG00020010621	RPUSD4	71	43.165	Canis_lupus_dingo
ENSCSAVG00000000872	-	54	42.086	ENSCHIG00000009975	RPUSD4	71	42.086	Capra_hircus
ENSCSAVG00000000872	-	54	43.165	ENSTSYG00000008456	RPUSD4	72	43.165	Carlito_syrichta
ENSCSAVG00000000872	-	51	38.491	ENSCAPG00000006040	RPUSD4	99	38.491	Cavia_aperea
ENSCSAVG00000000872	-	66	38.596	ENSCPOG00000014971	RPUSD4	88	38.596	Cavia_porcellus
ENSCSAVG00000000872	-	54	43.165	ENSCCAG00000027838	RPUSD4	72	43.165	Cebus_capucinus
ENSCSAVG00000000872	-	54	43.525	ENSCATG00000041570	RPUSD4	71	43.525	Cercocebus_atys
ENSCSAVG00000000872	-	57	42.517	ENSCLAG00000016553	RPUSD4	76	42.517	Chinchilla_lanigera
ENSCSAVG00000000872	-	54	42.806	ENSCSAG00000002274	RPUSD4	71	42.806	Chlorocebus_sabaeus
ENSCSAVG00000000872	-	53	42.701	ENSCHOG00000010249	RPUSD4	94	42.701	Choloepus_hoffmanni
ENSCSAVG00000000872	-	54	41.367	ENSCPBG00000011175	RPUSD4	93	41.367	Chrysemys_picta_bellii
ENSCSAVG00000000872	-	54	44.245	ENSCANG00000039684	RPUSD4	71	44.245	Colobus_angolensis_palliatus
ENSCSAVG00000000872	-	54	42.086	ENSCGRG00001024141	Rpusd4	71	42.086	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000872	-	54	42.086	ENSCGRG00000014415	Rpusd4	71	42.086	Cricetulus_griseus_crigri
ENSCSAVG00000000872	-	63	36.527	ENSCVAG00000000392	rpusd4	91	36.527	Cyprinodon_variegatus
ENSCSAVG00000000872	-	63	36.527	ENSCVAG00000008761	rpusd4	85	35.817	Cyprinodon_variegatus
ENSCSAVG00000000872	-	60	36.656	ENSDARG00000012674	rpusd4	89	35.952	Danio_rerio
ENSCSAVG00000000872	-	54	43.885	ENSDNOG00000020026	RPUSD4	72	43.885	Dasypus_novemcinctus
ENSCSAVG00000000872	-	54	42.960	ENSDORG00000016717	Rpusd4	71	42.960	Dipodomys_ordii
ENSCSAVG00000000872	-	54	42.238	ENSETEG00000013953	RPUSD4	72	42.238	Echinops_telfairi
ENSCSAVG00000000872	-	54	42.446	ENSEASG00005022982	RPUSD4	71	42.446	Equus_asinus_asinus
ENSCSAVG00000000872	-	54	42.446	ENSECAG00000000557	RPUSD4	71	42.446	Equus_caballus
ENSCSAVG00000000872	-	66	37.746	ENSELUG00000008075	rpusd4	89	37.746	Esox_lucius
ENSCSAVG00000000872	-	54	42.086	ENSFCAG00000029789	RPUSD4	71	42.086	Felis_catus
ENSCSAVG00000000872	-	61	39.365	ENSFALG00000005171	RPUSD4	90	39.365	Ficedula_albicollis
ENSCSAVG00000000872	-	57	42.466	ENSFDAG00000014307	RPUSD4	76	42.466	Fukomys_damarensis
ENSCSAVG00000000872	-	63	36.086	ENSFHEG00000004329	rpusd4	83	36.086	Fundulus_heteroclitus
ENSCSAVG00000000872	-	62	35.385	ENSGMOG00000017726	rpusd4	95	35.385	Gadus_morhua
ENSCSAVG00000000872	-	54	43.321	ENSGALG00000024326	RPUSD4	76	43.885	Gallus_gallus
ENSCSAVG00000000872	-	54	36.918	ENSGAFG00000021559	rpusd4	69	36.918	Gambusia_affinis
ENSCSAVG00000000872	-	63	36.391	ENSGACG00000001657	rpusd4	95	39.643	Gasterosteus_aculeatus
ENSCSAVG00000000872	-	54	41.007	ENSGAGG00000000132	RPUSD4	75	41.007	Gopherus_agassizii
ENSCSAVG00000000872	-	54	42.806	ENSGGOG00000016494	RPUSD4	71	42.806	Gorilla_gorilla
ENSCSAVG00000000872	-	53	41.455	ENSHBUG00000022838	rpusd4	68	41.455	Haplochromis_burtoni
ENSCSAVG00000000872	-	57	43.003	ENSHGLG00000002285	RPUSD4	75	43.003	Heterocephalus_glaber_female
ENSCSAVG00000000872	-	57	43.003	ENSHGLG00100006385	RPUSD4	75	43.003	Heterocephalus_glaber_male
ENSCSAVG00000000872	-	63	34.650	ENSIPUG00000023879	rusd4	82	34.650	Ictalurus_punctatus
ENSCSAVG00000000872	-	54	43.525	ENSSTOG00000025280	RPUSD4	74	43.525	Ictidomys_tridecemlineatus
ENSCSAVG00000000872	-	63	39.264	ENSJJAG00000018673	Rpusd4	85	39.264	Jaculus_jaculus
ENSCSAVG00000000872	-	63	37.500	ENSKMAG00000021805	rpusd4	83	37.500	Kryptolebias_marmoratus
ENSCSAVG00000000872	-	54	40.925	ENSLBEG00000020394	rpusd4	76	40.502	Labrus_bergylta
ENSCSAVG00000000872	-	55	41.135	ENSLACG00000011028	RPUSD4	70	41.135	Latimeria_chalumnae
ENSCSAVG00000000872	-	63	31.579	ENSLOCG00000003124	rpusd4	85	31.579	Lepisosteus_oculatus
ENSCSAVG00000000872	-	63	38.390	ENSLAFG00000005211	RPUSD4	99	38.384	Loxodonta_africana
ENSCSAVG00000000872	-	54	43.165	ENSMFAG00000039513	RPUSD4	71	43.165	Macaca_fascicularis
ENSCSAVG00000000872	-	54	42.806	ENSMMUG00000007933	RPUSD4	71	42.806	Macaca_mulatta
ENSCSAVG00000000872	-	54	43.165	ENSMNEG00000027414	RPUSD4	71	43.165	Macaca_nemestrina
ENSCSAVG00000000872	-	54	43.165	ENSMLEG00000042461	RPUSD4	71	43.165	Mandrillus_leucophaeus
ENSCSAVG00000000872	-	70	33.787	ENSMAMG00000023839	rpusd4	93	33.787	Mastacembelus_armatus
ENSCSAVG00000000872	-	53	41.455	ENSMZEG00005011999	rpusd4	68	41.455	Maylandia_zebra
ENSCSAVG00000000872	-	54	42.599	ENSMGAG00000000840	RPUSD4	84	42.599	Meleagris_gallopavo
ENSCSAVG00000000872	-	57	41.497	ENSMAUG00000010280	Rpusd4	76	41.497	Mesocricetus_auratus
ENSCSAVG00000000872	-	54	42.086	ENSMICG00000015979	RPUSD4	81	42.086	Microcebus_murinus
ENSCSAVG00000000872	-	54	40.794	ENSMOCG00000000661	Rpusd4	71	40.794	Microtus_ochrogaster
ENSCSAVG00000000872	-	54	39.785	ENSMMOG00000021731	rpusd4	81	39.785	Mola_mola
ENSCSAVG00000000872	-	50	44.615	ENSMODG00000004521	RPUSD4	65	44.615	Monodelphis_domestica
ENSCSAVG00000000872	-	54	40.714	ENSMALG00000005839	rpusd4	82	40.714	Monopterus_albus
ENSCSAVG00000000872	-	53	43.750	MGP_CAROLIEiJ_G0031954	Rpusd4	70	43.750	Mus_caroli
ENSCSAVG00000000872	-	53	43.015	ENSMUSG00000032044	Rpusd4	70	43.015	Mus_musculus
ENSCSAVG00000000872	-	53	43.015	MGP_PahariEiJ_G0014819	Rpusd4	70	43.015	Mus_pahari
ENSCSAVG00000000872	-	53	43.015	MGP_SPRETEiJ_G0033078	Rpusd4	70	43.015	Mus_spretus
ENSCSAVG00000000872	-	54	41.007	ENSMPUG00000006608	RPUSD4	72	41.007	Mustela_putorius_furo
ENSCSAVG00000000872	-	50	41.085	ENSMLUG00000029348	-	98	41.085	Myotis_lucifugus
ENSCSAVG00000000872	-	54	43.165	ENSMLUG00000017328	-	71	43.165	Myotis_lucifugus
ENSCSAVG00000000872	-	54	43.885	ENSNGAG00000020847	Rpusd4	71	43.885	Nannospalax_galili
ENSCSAVG00000000872	-	63	37.994	ENSNBRG00000005207	rpusd4	92	37.994	Neolamprologus_brichardi
ENSCSAVG00000000872	-	54	43.165	ENSNLEG00000007465	RPUSD4	71	43.165	Nomascus_leucogenys
ENSCSAVG00000000872	-	54	42.446	ENSMEUG00000004370	RPUSD4	73	42.446	Notamacropus_eugenii
ENSCSAVG00000000872	-	57	41.497	ENSODEG00000004577	RPUSD4	76	41.497	Octodon_degus
ENSCSAVG00000000872	-	53	41.455	ENSONIG00000018879	rpusd4	72	41.455	Oreochromis_niloticus
ENSCSAVG00000000872	-	54	42.652	ENSOCUG00000017039	RPUSD4	72	42.652	Oryctolagus_cuniculus
ENSCSAVG00000000872	-	54	40.141	ENSORLG00000002750	rpusd4	75	39.427	Oryzias_latipes
ENSCSAVG00000000872	-	54	39.068	ENSORLG00020002044	rpusd4	68	39.068	Oryzias_latipes_hni
ENSCSAVG00000000872	-	65	35.988	ENSORLG00015020034	rpusd4	83	35.988	Oryzias_latipes_hsok
ENSCSAVG00000000872	-	66	36.919	ENSOMEG00000004861	rpusd4	83	36.919	Oryzias_melastigma
ENSCSAVG00000000872	-	56	42.907	ENSOGAG00000008922	RPUSD4	74	42.907	Otolemur_garnettii
ENSCSAVG00000000872	-	54	42.446	ENSOARG00000012238	RPUSD4	71	42.446	Ovis_aries
ENSCSAVG00000000872	-	54	42.806	ENSPPAG00000042883	RPUSD4	66	42.806	Pan_paniscus
ENSCSAVG00000000872	-	54	42.086	ENSPPRG00000003081	RPUSD4	71	42.086	Panthera_pardus
ENSCSAVG00000000872	-	54	42.086	ENSPTIG00000012059	RPUSD4	77	42.086	Panthera_tigris_altaica
ENSCSAVG00000000872	-	54	42.806	ENSPTRG00000004454	RPUSD4	71	42.806	Pan_troglodytes
ENSCSAVG00000000872	-	54	42.446	ENSPANG00000015040	RPUSD4	71	42.446	Papio_anubis
ENSCSAVG00000000872	-	63	38.154	ENSPKIG00000023986	rpusd4	81	38.154	Paramormyrops_kingsleyae
ENSCSAVG00000000872	-	54	39.568	ENSPSIG00000014268	RPUSD4	86	39.568	Pelodiscus_sinensis
ENSCSAVG00000000872	-	54	38.929	ENSPMGG00000002806	rpusd4	75	38.929	Periophthalmus_magnuspinnatus
ENSCSAVG00000000872	-	54	34.173	ENSPEMG00000000278	Rpusd4	70	34.173	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000872	-	54	36.039	ENSPMAG00000008183	rpusd4	87	36.039	Petromyzon_marinus
ENSCSAVG00000000872	-	54	42.086	ENSPCIG00000010212	RPUSD4	74	42.086	Phascolarctos_cinereus
ENSCSAVG00000000872	-	54	38.790	ENSPFOG00000019030	rpusd4	72	38.790	Poecilia_formosa
ENSCSAVG00000000872	-	54	39.068	ENSPLAG00000016848	rpusd4	69	39.068	Poecilia_latipinna
ENSCSAVG00000000872	-	54	38.710	ENSPMEG00000017534	rpusd4	69	38.710	Poecilia_mexicana
ENSCSAVG00000000872	-	50	40.684	ENSPREG00000005689	rpusd4	67	40.684	Poecilia_reticulata
ENSCSAVG00000000872	-	54	42.446	ENSPPYG00000004043	RPUSD4	71	42.446	Pongo_abelii
ENSCSAVG00000000872	-	54	39.568	ENSPCOG00000020694	RPUSD4	70	39.568	Propithecus_coquereli
ENSCSAVG00000000872	-	56	41.869	ENSPVAG00000000988	RPUSD4	75	41.869	Pteropus_vampyrus
ENSCSAVG00000000872	-	53	41.091	ENSPNYG00000009652	rpusd4	68	41.091	Pundamilia_nyererei
ENSCSAVG00000000872	-	66	36.232	ENSPNAG00000012264	rpusd4	88	36.232	Pygocentrus_nattereri
ENSCSAVG00000000872	-	54	42.960	ENSRNOG00000011567	Rpusd4	71	42.960	Rattus_norvegicus
ENSCSAVG00000000872	-	54	43.525	ENSRBIG00000034842	RPUSD4	71	43.525	Rhinopithecus_bieti
ENSCSAVG00000000872	-	54	43.525	ENSRROG00000039753	RPUSD4	71	43.525	Rhinopithecus_roxellana
ENSCSAVG00000000872	-	54	42.806	ENSSBOG00000030413	RPUSD4	72	42.806	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000872	-	54	42.806	ENSSHAG00000008304	RPUSD4	89	42.806	Sarcophilus_harrisii
ENSCSAVG00000000872	-	54	43.416	ENSSFOG00015006203	rpusd4	89	38.439	Scleropages_formosus
ENSCSAVG00000000872	-	63	37.764	ENSSMAG00000020978	rpusd4	84	37.764	Scophthalmus_maximus
ENSCSAVG00000000872	-	63	36.364	ENSSDUG00000013399	rpusd4	84	36.364	Seriola_dumerili
ENSCSAVG00000000872	-	63	36.364	ENSSLDG00000023507	rpusd4	84	36.364	Seriola_lalandi_dorsalis
ENSCSAVG00000000872	-	54	42.294	ENSSPUG00000001401	RPUSD4	75	42.294	Sphenodon_punctatus
ENSCSAVG00000000872	-	62	37.346	ENSSPAG00000012163	rpusd4	81	37.346	Stegastes_partitus
ENSCSAVG00000000872	-	55	42.756	ENSSSCG00000015233	RPUSD4	73	42.756	Sus_scrofa
ENSCSAVG00000000872	-	54	40.794	ENSTGUG00000000773	RPUSD4	90	40.794	Taeniopygia_guttata
ENSCSAVG00000000872	-	54	38.351	ENSTRUG00000012283	rpusd4	70	38.351	Takifugu_rubripes
ENSCSAVG00000000872	-	62	35.802	ENSTNIG00000014676	rpusd4	81	35.802	Tetraodon_nigroviridis
ENSCSAVG00000000872	-	54	43.165	ENSTTRG00000001555	RPUSD4	72	43.165	Tursiops_truncatus
ENSCSAVG00000000872	-	54	42.086	ENSUMAG00000002219	RPUSD4	71	42.086	Ursus_maritimus
ENSCSAVG00000000872	-	54	43.165	ENSVVUG00000020101	RPUSD4	71	43.525	Vulpes_vulpes
ENSCSAVG00000000872	-	54	37.634	ENSXCOG00000004676	rpusd4	71	37.276	Xiphophorus_couchianus
ENSCSAVG00000000872	-	54	37.993	ENSXMAG00000023351	rpusd4	69	37.993	Xiphophorus_maculatus