EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000000886 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4261 bases
Position: chrreftig_85:147714-151974
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001557	CNOT11	PF10155.9	1.4e-52	1	1
ENSCSAVP00000001558	CNOT11	PF10155.9	4.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001577	-	1536	-	ENSCSAVP00000001557	451 (aa)	-	H2Y8A9
ENSCSAVT00000001578	-	1033	-	ENSCSAVP00000001558	299 (aa)	-	H2Y8B0

Gene Model

Click here to download ENSCSAVG00000000886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000000886	-	100	97.659	ENSCSAVG00000004868	-	100	97.659

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000886	-	99	60.619	ENSG00000158435	CNOT11	98	84.677	Homo_sapiens
ENSCSAVG00000000886	-	99	57.271	ENSAPOG00000020231	cnot11	98	57.271	Acanthochromis_polyacanthus
ENSCSAVG00000000886	-	99	60.619	ENSAMEG00000015585	CNOT11	91	60.619	Ailuropoda_melanoleuca
ENSCSAVG00000000886	-	99	59.867	ENSACIG00000002791	cnot11	98	59.867	Amphilophus_citrinellus
ENSCSAVG00000000886	-	99	60.179	ENSAOCG00000005087	cnot11	98	60.179	Amphiprion_ocellaris
ENSCSAVG00000000886	-	99	47.159	ENSAPEG00000019235	cnot11	98	55.949	Amphiprion_percula
ENSCSAVG00000000886	-	99	59.688	ENSATEG00000014714	cnot11	98	59.688	Anabas_testudineus
ENSCSAVG00000000886	-	92	62.118	ENSAPLG00000002957	CNOT11	92	62.143	Anas_platyrhynchos
ENSCSAVG00000000886	-	100	60.044	ENSACAG00000007718	CNOT11	99	60.044	Anolis_carolinensis
ENSCSAVG00000000886	-	99	60.841	ENSANAG00000028092	CNOT11	87	60.841	Aotus_nancymaae
ENSCSAVG00000000886	-	99	60.532	ENSACLG00000015057	cnot11	92	60.532	Astatotilapia_calliptera
ENSCSAVG00000000886	-	99	62.416	ENSAMXG00000012843	cnot11	98	62.416	Astyanax_mexicanus
ENSCSAVG00000000886	-	99	60.619	ENSBTAG00000008267	CNOT11	86	60.619	Bos_taurus
ENSCSAVG00000000886	-	99	60.619	ENSCJAG00000021229	CNOT11	86	60.619	Callithrix_jacchus
ENSCSAVG00000000886	-	99	60.619	ENSCAFG00000002199	CNOT11	85	60.619	Canis_familiaris
ENSCSAVG00000000886	-	99	60.619	ENSCAFG00020024562	CNOT11	85	60.619	Canis_lupus_dingo
ENSCSAVG00000000886	-	99	60.619	ENSCHIG00000026686	CNOT11	88	60.619	Capra_hircus
ENSCSAVG00000000886	-	73	66.071	ENSTSYG00000006729	-	78	66.071	Carlito_syrichta
ENSCSAVG00000000886	-	97	48.636	ENSTSYG00000031278	-	86	48.636	Carlito_syrichta
ENSCSAVG00000000886	-	99	61.283	ENSCPOG00000012029	CNOT11	87	61.504	Cavia_porcellus
ENSCSAVG00000000886	-	99	60.619	ENSCCAG00000027582	CNOT11	87	60.619	Cebus_capucinus
ENSCSAVG00000000886	-	99	57.206	ENSCATG00000040259	CNOT11	86	57.206	Cercocebus_atys
ENSCSAVG00000000886	-	99	60.619	ENSCSAG00000017167	CNOT11	86	60.619	Chlorocebus_sabaeus
ENSCSAVG00000000886	-	73	87.821	ENSCHOG00000012050	CNOT11	81	87.821	Choloepus_hoffmanni
ENSCSAVG00000000886	-	99	46.176	ENSCPBG00000004780	CNOT11	76	49.522	Chrysemys_picta_bellii
ENSCSAVG00000000886	-	82	87.332	ENSCING00000005938	-	100	87.332	Ciona_intestinalis
ENSCSAVG00000000886	-	99	60.619	ENSCANG00000038129	CNOT11	98	60.619	Colobus_angolensis_palliatus
ENSCSAVG00000000886	-	99	61.062	ENSCGRG00001018815	Cnot11	87	61.062	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000886	-	99	61.062	ENSCGRG00000003113	-	87	61.062	Cricetulus_griseus_crigri
ENSCSAVG00000000886	-	99	59.020	ENSCSEG00000020759	cnot11	98	58.837	Cynoglossus_semilaevis
ENSCSAVG00000000886	-	100	59.692	ENSCVAG00000022960	cnot11	99	59.692	Cyprinodon_variegatus
ENSCSAVG00000000886	-	99	60.626	ENSDARG00000068596	cnot11	98	60.626	Danio_rerio
ENSCSAVG00000000886	-	99	60.619	ENSDNOG00000011948	CNOT11	86	60.619	Dasypus_novemcinctus
ENSCSAVG00000000886	-	99	61.062	ENSDORG00000004481	Cnot11	98	84.932	Dipodomys_ordii
ENSCSAVG00000000886	-	99	60.619	ENSETEG00000002098	CNOT11	86	60.619	Echinops_telfairi
ENSCSAVG00000000886	-	99	47.126	ENSEBUG00000011268	cnot11	95	52.446	Eptatretus_burgeri
ENSCSAVG00000000886	-	99	60.619	ENSEASG00005018296	CNOT11	86	60.619	Equus_asinus_asinus
ENSCSAVG00000000886	-	99	60.619	ENSECAG00000011967	CNOT11	86	60.619	Equus_caballus
ENSCSAVG00000000886	-	99	61.298	ENSELUG00000009042	cnot11	98	61.298	Esox_lucius
ENSCSAVG00000000886	-	99	60.619	ENSFCAG00000006924	CNOT11	86	60.619	Felis_catus
ENSCSAVG00000000886	-	98	61.333	ENSFALG00000003802	CNOT11	98	61.333	Ficedula_albicollis
ENSCSAVG00000000886	-	100	59.649	ENSFHEG00000001754	cnot11	99	59.471	Fundulus_heteroclitus
ENSCSAVG00000000886	-	99	60.579	ENSGMOG00000005200	cnot11	98	60.579	Gadus_morhua
ENSCSAVG00000000886	-	99	61.538	ENSGALG00000039563	CNOT11	93	61.538	Gallus_gallus
ENSCSAVG00000000886	-	99	60.444	ENSGAFG00000004433	cnot11	98	60.444	Gambusia_affinis
ENSCSAVG00000000886	-	99	60.579	ENSGACG00000007941	cnot11	98	60.579	Gasterosteus_aculeatus
ENSCSAVG00000000886	-	100	60.480	ENSGAGG00000004292	CNOT11	92	61.074	Gopherus_agassizii
ENSCSAVG00000000886	-	99	56.388	ENSGGOG00000005070	CNOT11	86	56.388	Gorilla_gorilla
ENSCSAVG00000000886	-	99	60.356	ENSHBUG00000020454	cnot11	98	60.356	Haplochromis_burtoni
ENSCSAVG00000000886	-	99	61.062	ENSHGLG00000005196	CNOT11	97	85.517	Heterocephalus_glaber_female
ENSCSAVG00000000886	-	99	61.062	ENSHGLG00100005946	CNOT11	97	85.517	Heterocephalus_glaber_male
ENSCSAVG00000000886	-	99	60.491	ENSHCOG00000001826	cnot11	98	60.491	Hippocampus_comes
ENSCSAVG00000000886	-	99	61.161	ENSIPUG00000005134	cnot11	98	61.161	Ictalurus_punctatus
ENSCSAVG00000000886	-	99	61.062	ENSSTOG00000002674	CNOT11	98	84.932	Ictidomys_tridecemlineatus
ENSCSAVG00000000886	-	99	60.841	ENSJJAG00000017976	Cnot11	98	84.932	Jaculus_jaculus
ENSCSAVG00000000886	-	100	60.175	ENSKMAG00000005191	cnot11	99	60.175	Kryptolebias_marmoratus
ENSCSAVG00000000886	-	99	60.802	ENSLBEG00000022855	cnot11	98	60.802	Labrus_bergylta
ENSCSAVG00000000886	-	99	61.504	ENSLACG00000012383	CNOT11	98	61.504	Latimeria_chalumnae
ENSCSAVG00000000886	-	99	60.850	ENSLOCG00000010579	cnot11	98	60.850	Lepisosteus_oculatus
ENSCSAVG00000000886	-	99	55.000	ENSLAFG00000006411	CNOT11	89	55.000	Loxodonta_africana
ENSCSAVG00000000886	-	99	60.619	ENSMFAG00000044449	CNOT11	88	60.619	Macaca_fascicularis
ENSCSAVG00000000886	-	99	60.619	ENSMMUG00000001147	CNOT11	86	60.619	Macaca_mulatta
ENSCSAVG00000000886	-	99	60.619	ENSMNEG00000044355	CNOT11	88	60.619	Macaca_nemestrina
ENSCSAVG00000000886	-	99	58.850	ENSMLEG00000024913	CNOT11	86	58.850	Mandrillus_leucophaeus
ENSCSAVG00000000886	-	99	60.626	ENSMAMG00000013914	cnot11	98	60.626	Mastacembelus_armatus
ENSCSAVG00000000886	-	99	60.356	ENSMZEG00005020316	cnot11	98	60.356	Maylandia_zebra
ENSCSAVG00000000886	-	62	69.474	ENSMGAG00000014802	CNOT11	96	69.474	Meleagris_gallopavo
ENSCSAVG00000000886	-	99	61.074	ENSMAUG00000008251	Cnot11	98	84.932	Mesocricetus_auratus
ENSCSAVG00000000886	-	99	60.841	ENSMICG00000002973	CNOT11	86	60.841	Microcebus_murinus
ENSCSAVG00000000886	-	99	60.841	ENSMOCG00000020059	Cnot11	98	84.932	Microtus_ochrogaster
ENSCSAVG00000000886	-	99	60.134	ENSMMOG00000013493	cnot11	98	60.134	Mola_mola
ENSCSAVG00000000886	-	99	60.850	ENSMODG00000001737	CNOT11	86	60.850	Monodelphis_domestica
ENSCSAVG00000000886	-	99	59.243	ENSMALG00000013293	cnot11	98	59.243	Monopterus_albus
ENSCSAVG00000000886	-	99	60.841	MGP_CAROLIEiJ_G0014071	Cnot11	98	84.932	Mus_caroli
ENSCSAVG00000000886	-	99	60.841	ENSMUSG00000003135	Cnot11	98	84.932	Mus_musculus
ENSCSAVG00000000886	-	99	60.841	MGP_PahariEiJ_G0027318	Cnot11	98	84.932	Mus_pahari
ENSCSAVG00000000886	-	99	60.841	MGP_SPRETEiJ_G0014875	Cnot11	98	84.932	Mus_spretus
ENSCSAVG00000000886	-	99	60.619	ENSMPUG00000012207	CNOT11	86	60.619	Mustela_putorius_furo
ENSCSAVG00000000886	-	99	61.269	ENSMLUG00000004555	CNOT11	87	61.269	Myotis_lucifugus
ENSCSAVG00000000886	-	99	60.398	ENSNGAG00000014276	Cnot11	97	85.517	Nannospalax_galili
ENSCSAVG00000000886	-	99	60.356	ENSNBRG00000014731	cnot11	98	60.356	Neolamprologus_brichardi
ENSCSAVG00000000886	-	99	60.619	ENSNLEG00000014472	CNOT11	89	60.619	Nomascus_leucogenys
ENSCSAVG00000000886	-	99	60.626	ENSMEUG00000004695	CNOT11	88	60.626	Notamacropus_eugenii
ENSCSAVG00000000886	-	74	62.353	ENSOPRG00000009923	CNOT11	65	62.353	Ochotona_princeps
ENSCSAVG00000000886	-	99	61.062	ENSODEG00000007133	CNOT11	97	85.517	Octodon_degus
ENSCSAVG00000000886	-	99	60.356	ENSONIG00000016162	cnot11	98	60.356	Oreochromis_niloticus
ENSCSAVG00000000886	-	99	61.074	ENSOANG00000013148	CNOT11	93	61.074	Ornithorhynchus_anatinus
ENSCSAVG00000000886	-	73	66.071	ENSOCUG00000004448	CNOT11	66	66.071	Oryctolagus_cuniculus
ENSCSAVG00000000886	-	99	60.491	ENSORLG00000014270	cnot11	98	60.491	Oryzias_latipes
ENSCSAVG00000000886	-	94	61.358	ENSORLG00020005490	cnot11	93	62.774	Oryzias_latipes_hni
ENSCSAVG00000000886	-	99	60.356	ENSOMEG00000014389	cnot11	98	60.356	Oryzias_melastigma
ENSCSAVG00000000886	-	99	60.352	ENSOGAG00000014506	CNOT11	87	60.352	Otolemur_garnettii
ENSCSAVG00000000886	-	99	60.619	ENSOARG00000013243	CNOT11	86	60.619	Ovis_aries
ENSCSAVG00000000886	-	93	61.466	ENSPPAG00000033121	CNOT11	96	61.466	Pan_paniscus
ENSCSAVG00000000886	-	99	60.619	ENSPPRG00000025043	CNOT11	86	60.619	Panthera_pardus
ENSCSAVG00000000886	-	73	56.213	ENSPTIG00000008532	CNOT11	80	56.250	Panthera_tigris_altaica
ENSCSAVG00000000886	-	99	60.619	ENSPTRG00000012290	CNOT11	86	60.619	Pan_troglodytes
ENSCSAVG00000000886	-	99	60.619	ENSPANG00000023665	CNOT11	88	60.619	Papio_anubis
ENSCSAVG00000000886	-	99	62.192	ENSPKIG00000019709	cnot11	98	62.192	Paramormyrops_kingsleyae
ENSCSAVG00000000886	-	69	66.877	ENSPSIG00000017469	CNOT11	97	66.877	Pelodiscus_sinensis
ENSCSAVG00000000886	-	99	60.222	ENSPMGG00000000573	cnot11	98	60.222	Periophthalmus_magnuspinnatus
ENSCSAVG00000000886	-	100	59.382	ENSPMAG00000001860	cnot11	99	59.382	Petromyzon_marinus
ENSCSAVG00000000886	-	99	60.802	ENSPCIG00000016312	CNOT11	74	60.793	Phascolarctos_cinereus
ENSCSAVG00000000886	-	99	60.268	ENSPFOG00000000176	cnot11	98	60.268	Poecilia_formosa
ENSCSAVG00000000886	-	99	60.579	ENSPLAG00000023797	cnot11	98	60.268	Poecilia_latipinna
ENSCSAVG00000000886	-	99	60.268	ENSPMEG00000015700	cnot11	98	60.268	Poecilia_mexicana
ENSCSAVG00000000886	-	99	60.268	ENSPREG00000011520	cnot11	98	60.268	Poecilia_reticulata
ENSCSAVG00000000886	-	99	60.619	ENSPPYG00000012103	CNOT11	86	60.619	Pongo_abelii
ENSCSAVG00000000886	-	99	57.399	ENSPCAG00000004690	CNOT11	87	57.399	Procavia_capensis
ENSCSAVG00000000886	-	99	60.841	ENSPCOG00000022088	CNOT11	87	60.841	Propithecus_coquereli
ENSCSAVG00000000886	-	99	60.626	ENSPVAG00000002962	CNOT11	96	60.626	Pteropus_vampyrus
ENSCSAVG00000000886	-	99	60.356	ENSPNYG00000023499	cnot11	98	60.356	Pundamilia_nyererei
ENSCSAVG00000000886	-	99	62.416	ENSPNAG00000006187	cnot11	98	62.416	Pygocentrus_nattereri
ENSCSAVG00000000886	-	99	61.062	ENSRNOG00000023220	Cnot11	88	61.062	Rattus_norvegicus
ENSCSAVG00000000886	-	99	60.619	ENSRBIG00000006823	CNOT11	86	60.619	Rhinopithecus_bieti
ENSCSAVG00000000886	-	99	60.619	ENSRROG00000033116	CNOT11	86	60.619	Rhinopithecus_roxellana
ENSCSAVG00000000886	-	99	60.619	ENSSBOG00000030189	CNOT11	87	60.619	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000886	-	100	60.262	ENSSHAG00000006432	CNOT11	99	60.262	Sarcophilus_harrisii
ENSCSAVG00000000886	-	99	57.494	ENSSFOG00015002194	cnot11	98	57.494	Scleropages_formosus
ENSCSAVG00000000886	-	99	60.850	ENSSMAG00000010790	cnot11	98	60.850	Scophthalmus_maximus
ENSCSAVG00000000886	-	99	60.356	ENSSDUG00000012467	cnot11	98	60.356	Seriola_dumerili
ENSCSAVG00000000886	-	99	60.356	ENSSLDG00000020769	cnot11	98	60.356	Seriola_lalandi_dorsalis
ENSCSAVG00000000886	-	73	62.614	ENSSARG00000006032	CNOT11	97	62.614	Sorex_araneus
ENSCSAVG00000000886	-	99	60.746	ENSSPUG00000012189	CNOT11	98	60.976	Sphenodon_punctatus
ENSCSAVG00000000886	-	99	60.403	ENSSPAG00000005202	cnot11	98	60.403	Stegastes_partitus
ENSCSAVG00000000886	-	100	60.044	ENSSSCG00000008167	CNOT11	87	60.044	Sus_scrofa
ENSCSAVG00000000886	-	97	60.938	ENSTGUG00000009952	-	98	60.938	Taeniopygia_guttata
ENSCSAVG00000000886	-	61	67.958	ENSTGUG00000015810	-	97	67.958	Taeniopygia_guttata
ENSCSAVG00000000886	-	99	60.222	ENSTRUG00000016939	cnot11	98	60.222	Takifugu_rubripes
ENSCSAVG00000000886	-	99	54.867	ENSTBEG00000016383	CNOT11	86	55.310	Tupaia_belangeri
ENSCSAVG00000000886	-	99	60.619	ENSTTRG00000016449	CNOT11	86	60.626	Tursiops_truncatus
ENSCSAVG00000000886	-	99	60.619	ENSUAMG00000022337	CNOT11	86	60.619	Ursus_americanus
ENSCSAVG00000000886	-	73	66.071	ENSUMAG00000007473	CNOT11	87	65.976	Ursus_maritimus
ENSCSAVG00000000886	-	57	84.713	ENSVPAG00000012206	-	77	84.713	Vicugna_pacos
ENSCSAVG00000000886	-	94	60.890	ENSVVUG00000028664	CNOT11	89	60.890	Vulpes_vulpes
ENSCSAVG00000000886	-	100	60.699	ENSXETG00000033799	CNOT11	99	60.699	Xenopus_tropicalis
ENSCSAVG00000000886	-	99	60.268	ENSXCOG00000008490	cnot11	98	60.268	Xiphophorus_couchianus
ENSCSAVG00000000886	-	99	60.268	ENSXMAG00000008671	cnot11	98	60.268	Xiphophorus_maculatus