EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000000894 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2339 bases
Position: chrreftig_85:151978-154316
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001568	HVSL	PF09749.9	1.1e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001588	-	922	-	ENSCSAVP00000001568	274 (aa)	-	H2Y8C0

Gene Model

Click here to download ENSCSAVG00000000894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000000894's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000000894	-	82	30.263	ENSG00000103005	USB1	93	30.918	Homo_sapiens
ENSCSAVG00000000894	-	93	31.034	ENSAPOG00000011942	usb1	89	31.034	Acanthochromis_polyacanthus
ENSCSAVG00000000894	-	81	31.718	ENSAMEG00000017205	USB1	81	31.718	Ailuropoda_melanoleuca
ENSCSAVG00000000894	-	86	30.833	ENSACIG00000012234	usb1	85	30.833	Amphilophus_citrinellus
ENSCSAVG00000000894	-	84	31.915	ENSAOCG00000014831	usb1	82	32.365	Amphiprion_ocellaris
ENSCSAVG00000000894	-	82	30.702	ENSANAG00000035640	USB1	83	30.702	Aotus_nancymaae
ENSCSAVG00000000894	-	84	30.043	ENSACLG00000020586	usb1	80	30.043	Astatotilapia_calliptera
ENSCSAVG00000000894	-	85	33.473	ENSAMXG00000040146	usb1	75	33.473	Astyanax_mexicanus
ENSCSAVG00000000894	-	92	30.712	ENSBTAG00000015758	USB1	83	32.599	Bos_taurus
ENSCSAVG00000000894	-	82	31.140	ENSCJAG00000011733	USB1	83	31.004	Callithrix_jacchus
ENSCSAVG00000000894	-	83	31.169	ENSCAFG00000008556	USB1	60	31.169	Canis_familiaris
ENSCSAVG00000000894	-	81	31.858	ENSTSYG00000006997	USB1	83	31.858	Carlito_syrichta
ENSCSAVG00000000894	-	81	32.301	ENSCPOG00000014325	USB1	82	32.301	Cavia_porcellus
ENSCSAVG00000000894	-	82	30.702	ENSCCAG00000022132	USB1	83	30.702	Cebus_capucinus
ENSCSAVG00000000894	-	82	30.131	ENSCATG00000032174	USB1	83	30.131	Cercocebus_atys
ENSCSAVG00000000894	-	54	30.201	ENSCLAG00000007363	USB1	82	30.201	Chinchilla_lanigera
ENSCSAVG00000000894	-	82	30.131	ENSCSAG00000004783	USB1	83	30.263	Chlorocebus_sabaeus
ENSCSAVG00000000894	-	94	62.016	ENSCING00000011490	-	98	62.016	Ciona_intestinalis
ENSCSAVG00000000894	-	82	30.263	ENSCANG00000037135	USB1	84	30.263	Colobus_angolensis_palliatus
ENSCSAVG00000000894	-	90	30.916	ENSCGRG00001011243	USB1	82	33.186	Cricetulus_griseus_chok1gshd
ENSCSAVG00000000894	-	90	30.916	ENSCGRG00000013252	USB1	82	33.186	Cricetulus_griseus_crigri
ENSCSAVG00000000894	-	92	32.824	ENSCSEG00000013881	usb1	80	33.617	Cynoglossus_semilaevis
ENSCSAVG00000000894	-	82	30.901	ENSCVAG00000009252	usb1	96	31.169	Cyprinodon_variegatus
ENSCSAVG00000000894	-	92	32.171	ENSDARG00000003841	usb1	80	33.913	Danio_rerio
ENSCSAVG00000000894	-	92	32.463	ENSDORG00000001888	Usb1	83	33.772	Dipodomys_ordii
ENSCSAVG00000000894	-	58	30.000	ENSETEG00000019682	USB1	51	33.803	Echinops_telfairi
ENSCSAVG00000000894	-	91	30.709	ENSEBUG00000005889	usb1	80	31.092	Eptatretus_burgeri
ENSCSAVG00000000894	-	81	32.301	ENSEASG00005005484	USB1	83	32.301	Equus_asinus_asinus
ENSCSAVG00000000894	-	85	31.224	ENSECAG00000019493	USB1	79	31.224	Equus_caballus
ENSCSAVG00000000894	-	81	31.278	ENSFCAG00000002693	USB1	82	31.278	Felis_catus
ENSCSAVG00000000894	-	79	32.377	ENSFHEG00000012334	usb1	78	34.483	Fundulus_heteroclitus
ENSCSAVG00000000894	-	82	30.531	ENSGMOG00000004228	usb1	98	31.579	Gadus_morhua
ENSCSAVG00000000894	-	91	30.714	ENSGAFG00000021890	usb1	81	34.298	Gambusia_affinis
ENSCSAVG00000000894	-	82	30.396	ENSGAGG00000022572	USB1	81	30.396	Gopherus_agassizii
ENSCSAVG00000000894	-	84	30.043	ENSHBUG00000009823	usb1	80	30.043	Haplochromis_burtoni
ENSCSAVG00000000894	-	75	32.692	ENSHCOG00000015633	usb1	90	31.250	Hippocampus_comes
ENSCSAVG00000000894	-	91	31.225	ENSIPUG00000008601	usb1	79	31.489	Ictalurus_punctatus
ENSCSAVG00000000894	-	81	33.040	ENSJJAG00000021859	Usb1	82	33.040	Jaculus_jaculus
ENSCSAVG00000000894	-	69	32.124	ENSLACG00000000105	USB1	65	32.124	Latimeria_chalumnae
ENSCSAVG00000000894	-	82	30.263	ENSMFAG00000003926	USB1	83	30.131	Macaca_fascicularis
ENSCSAVG00000000894	-	82	30.263	ENSMMUG00000022669	USB1	83	30.131	Macaca_mulatta
ENSCSAVG00000000894	-	82	30.263	ENSMNEG00000042487	USB1	83	30.263	Macaca_nemestrina
ENSCSAVG00000000894	-	82	30.263	ENSMLEG00000028756	USB1	83	30.131	Mandrillus_leucophaeus
ENSCSAVG00000000894	-	84	30.043	ENSMZEG00005010008	usb1	80	30.043	Maylandia_zebra
ENSCSAVG00000000894	-	81	32.743	ENSMOCG00000022647	Usb1	82	32.743	Microtus_ochrogaster
ENSCSAVG00000000894	-	89	31.765	ENSMALG00000005930	usb1	82	32.231	Monopterus_albus
ENSCSAVG00000000894	-	81	32.444	MGP_CAROLIEiJ_G0031421	Usb1	91	33.962	Mus_caroli
ENSCSAVG00000000894	-	81	32.444	ENSMUSG00000031792	Usb1	91	33.962	Mus_musculus
ENSCSAVG00000000894	-	81	32.444	MGP_PahariEiJ_G0023019	Usb1	92	36.937	Mus_pahari
ENSCSAVG00000000894	-	81	32.000	MGP_SPRETEiJ_G0032540	Usb1	82	32.000	Mus_spretus
ENSCSAVG00000000894	-	81	30.973	ENSMLUG00000007400	USB1	95	30.973	Myotis_lucifugus
ENSCSAVG00000000894	-	81	32.599	ENSNGAG00000009703	Usb1	81	32.599	Nannospalax_galili
ENSCSAVG00000000894	-	75	31.579	ENSNBRG00000008747	usb1	94	31.579	Neolamprologus_brichardi
ENSCSAVG00000000894	-	71	31.313	ENSNLEG00000003340	USB1	77	31.156	Nomascus_leucogenys
ENSCSAVG00000000894	-	84	30.043	ENSONIG00000011063	usb1	81	30.043	Oreochromis_niloticus
ENSCSAVG00000000894	-	83	31.140	ENSORLG00000012479	usb1	82	31.140	Oryzias_latipes
ENSCSAVG00000000894	-	83	30.702	ENSORLG00020018671	usb1	82	30.702	Oryzias_latipes_hni
ENSCSAVG00000000894	-	83	31.140	ENSORLG00015009679	usb1	82	31.140	Oryzias_latipes_hsok
ENSCSAVG00000000894	-	83	31.140	ENSOMEG00000012930	usb1	80	31.739	Oryzias_melastigma
ENSCSAVG00000000894	-	81	31.718	ENSOARG00000001107	USB1	84	31.718	Ovis_aries
ENSCSAVG00000000894	-	82	30.263	ENSPPAG00000042137	USB1	83	30.263	Pan_paniscus
ENSCSAVG00000000894	-	81	30.837	ENSPPRG00000024797	USB1	82	30.837	Panthera_pardus
ENSCSAVG00000000894	-	81	30.837	ENSPTIG00000007506	USB1	82	30.837	Panthera_tigris_altaica
ENSCSAVG00000000894	-	74	30.918	ENSPTRG00000008172	USB1	93	30.918	Pan_troglodytes
ENSCSAVG00000000894	-	82	30.263	ENSPANG00000025138	USB1	83	30.131	Papio_anubis
ENSCSAVG00000000894	-	90	30.859	ENSPKIG00000015109	usb1	79	30.894	Paramormyrops_kingsleyae
ENSCSAVG00000000894	-	82	31.064	ENSPMGG00000017725	usb1	85	31.064	Periophthalmus_magnuspinnatus
ENSCSAVG00000000894	-	81	31.111	ENSPEMG00000016183	Usb1	81	31.278	Peromyscus_maniculatus_bairdii
ENSCSAVG00000000894	-	91	30.216	ENSPFOG00000011130	usb1	81	33.473	Poecilia_formosa
ENSCSAVG00000000894	-	91	31.071	ENSPLAG00000009820	usb1	80	33.475	Poecilia_latipinna
ENSCSAVG00000000894	-	91	30.216	ENSPMEG00000006402	usb1	81	33.473	Poecilia_mexicana
ENSCSAVG00000000894	-	79	32.520	ENSPREG00000001047	usb1	79	35.294	Poecilia_reticulata
ENSCSAVG00000000894	-	71	30.000	ENSPPYG00000007401	USB1	77	30.000	Pongo_abelii
ENSCSAVG00000000894	-	81	31.278	ENSPCOG00000022612	USB1	83	31.278	Propithecus_coquereli
ENSCSAVG00000000894	-	84	30.472	ENSPNYG00000022262	usb1	80	30.472	Pundamilia_nyererei
ENSCSAVG00000000894	-	82	30.435	ENSPNAG00000011736	usb1	75	30.435	Pygocentrus_nattereri
ENSCSAVG00000000894	-	81	30.222	ENSRNOG00000013216	Usb1	82	30.222	Rattus_norvegicus
ENSCSAVG00000000894	-	74	30.918	ENSRBIG00000044466	USB1	93	30.769	Rhinopithecus_bieti
ENSCSAVG00000000894	-	82	30.131	ENSRROG00000029211	USB1	83	30.131	Rhinopithecus_roxellana
ENSCSAVG00000000894	-	82	30.702	ENSSBOG00000029362	USB1	83	30.702	Saimiri_boliviensis_boliviensis
ENSCSAVG00000000894	-	85	32.051	ENSSFOG00015023663	usb1	71	32.328	Scleropages_formosus
ENSCSAVG00000000894	-	82	30.837	ENSSDUG00000002949	usb1	82	30.837	Seriola_dumerili
ENSCSAVG00000000894	-	84	31.330	ENSSLDG00000014174	usb1	80	31.330	Seriola_lalandi_dorsalis
ENSCSAVG00000000894	-	89	30.677	ENSTRUG00000021069	usb1	84	31.197	Takifugu_rubripes
ENSCSAVG00000000894	-	82	31.004	ENSUAMG00000016823	USB1	82	31.004	Ursus_americanus
ENSCSAVG00000000894	-	76	31.455	ENSUMAG00000021369	USB1	96	31.455	Ursus_maritimus
ENSCSAVG00000000894	-	83	30.000	ENSVVUG00000023700	USB1	71	30.000	Vulpes_vulpes
ENSCSAVG00000000894	-	79	32.420	ENSXETG00000013795	usb1	93	31.933	Xenopus_tropicalis
ENSCSAVG00000000894	-	84	31.780	ENSXMAG00000024687	usb1	67	34.112	Xiphophorus_maculatus