EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000001118 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8002 bases
Position: chrreftig_7:206585-214586
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001921	RRM_1	PF00076.22	2.1e-28	1	2
ENSCSAVP00000001921	RRM_1	PF00076.22	2.1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001955	-	1548	-	ENSCSAVP00000001921	389 (aa)	-	H2Y9C3

Gene Model

Click here to download ENSCSAVG00000001118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000001118	-	53	33.816	ENSCSAVG00000000188	-	53	33.149

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001118	-	57	42.795	ENSG00000071626	DAZAP1	53	44.444	Homo_sapiens
ENSCSAVG00000001118	-	57	42.795	ENSANAG00000036160	DAZAP1	51	45.503	Aotus_nancymaae
ENSCSAVG00000001118	-	96	35.632	ENSACLG00000023187	dazap1	50	37.705	Astatotilapia_calliptera
ENSCSAVG00000001118	-	57	42.795	ENSBTAG00000019714	DAZAP1	51	45.503	Bos_taurus
ENSCSAVG00000001118	-	50	35.385	WBGene00001999	hrp-1	50	37.079	Caenorhabditis_elegans
ENSCSAVG00000001118	-	57	42.358	ENSCJAG00000005609	DAZAP1	51	45.503	Callithrix_jacchus
ENSCSAVG00000001118	-	57	43.519	ENSCAFG00000019528	DAZAP1	65	46.591	Canis_familiaris
ENSCSAVG00000001118	-	57	42.667	ENSTSYG00000027054	DAZAP1	51	45.405	Carlito_syrichta
ENSCSAVG00000001118	-	62	40.329	ENSCPOG00000020185	DAZAP1	98	45.087	Cavia_porcellus
ENSCSAVG00000001118	-	57	42.795	ENSCCAG00000023519	DAZAP1	51	45.503	Cebus_capucinus
ENSCSAVG00000001118	-	57	42.795	ENSCATG00000029559	DAZAP1	51	45.503	Cercocebus_atys
ENSCSAVG00000001118	-	64	39.453	ENSCLAG00000009221	DAZAP1	99	45.509	Chinchilla_lanigera
ENSCSAVG00000001118	-	57	42.105	ENSCPBG00000022951	DAZAP1	50	45.503	Chrysemys_picta_bellii
ENSCSAVG00000001118	-	57	41.410	ENSCGRG00001021763	Cirbp	65	34.783	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001118	-	77	36.893	ENSDARG00000070846	dazap1	95	44.366	Danio_rerio
ENSCSAVG00000001118	-	83	38.720	ENSELUG00000010286	dazap1	52	45.055	Esox_lucius
ENSCSAVG00000001118	-	57	42.358	ENSFCAG00000010767	DAZAP1	51	45.503	Felis_catus
ENSCSAVG00000001118	-	77	37.500	ENSFHEG00000016786	dazap1	51	44.920	Fundulus_heteroclitus
ENSCSAVG00000001118	-	82	37.920	ENSGMOG00000001142	dazap1	53	45.989	Gadus_morhua
ENSCSAVG00000001118	-	57	41.667	ENSGALG00000015200	DAZAP1	50	44.681	Gallus_gallus
ENSCSAVG00000001118	-	99	35.632	ENSGACG00000008259	dazap1	54	44.737	Gasterosteus_aculeatus
ENSCSAVG00000001118	-	96	35.632	ENSHBUG00000014707	dazap1	52	44.809	Haplochromis_burtoni
ENSCSAVG00000001118	-	77	37.662	ENSIPUG00000006899	dazap1	52	45.355	Ictalurus_punctatus
ENSCSAVG00000001118	-	57	42.667	ENSMFAG00000000789	DAZAP1	51	45.405	Macaca_fascicularis
ENSCSAVG00000001118	-	57	42.795	ENSMNEG00000040014	DAZAP1	51	45.503	Macaca_nemestrina
ENSCSAVG00000001118	-	57	42.667	ENSMLEG00000035079	DAZAP1	51	45.405	Mandrillus_leucophaeus
ENSCSAVG00000001118	-	96	35.632	ENSMZEG00005016739	dazap1	50	34.426	Maylandia_zebra
ENSCSAVG00000001118	-	57	41.228	ENSMAUG00000012188	Dazap1	98	45.509	Mesocricetus_auratus
ENSCSAVG00000001118	-	57	41.228	ENSMOCG00000016931	Dazap1	98	45.509	Microtus_ochrogaster
ENSCSAVG00000001118	-	57	42.358	ENSMODG00000005157	DAZAP1	52	45.503	Monodelphis_domestica
ENSCSAVG00000001118	-	57	41.410	MGP_CAROLIEiJ_G0015574	Dazap1	98	45.509	Mus_caroli
ENSCSAVG00000001118	-	57	41.410	ENSMUSG00000069565	Dazap1	98	45.509	Mus_musculus
ENSCSAVG00000001118	-	57	41.410	MGP_PahariEiJ_G0030987	Dazap1	98	45.509	Mus_pahari
ENSCSAVG00000001118	-	57	41.410	MGP_SPRETEiJ_G0016392	Dazap1	98	45.509	Mus_spretus
ENSCSAVG00000001118	-	78	38.284	ENSNBRG00000004605	dazap1	52	45.055	Neolamprologus_brichardi
ENSCSAVG00000001118	-	57	42.667	ENSNLEG00000001563	DAZAP1	51	45.405	Nomascus_leucogenys
ENSCSAVG00000001118	-	57	42.667	ENSPPAG00000033205	DAZAP1	51	45.405	Pan_paniscus
ENSCSAVG00000001118	-	57	42.358	ENSPPRG00000012584	DAZAP1	51	45.503	Panthera_pardus
ENSCSAVG00000001118	-	57	42.222	ENSPTIG00000012046	DAZAP1	52	45.405	Panthera_tigris_altaica
ENSCSAVG00000001118	-	57	42.795	ENSPTRG00000010199	DAZAP1	51	45.503	Pan_troglodytes
ENSCSAVG00000001118	-	99	35.632	ENSPKIG00000007696	dazap1	52	43.605	Paramormyrops_kingsleyae
ENSCSAVG00000001118	-	57	42.358	ENSPCIG00000011156	DAZAP1	52	45.503	Phascolarctos_cinereus
ENSCSAVG00000001118	-	57	42.795	ENSPPYG00000009316	DAZAP1	51	45.503	Pongo_abelii
ENSCSAVG00000001118	-	57	41.905	ENSPCAG00000006539	DAZAP1	73	44.706	Procavia_capensis
ENSCSAVG00000001118	-	78	38.312	ENSPNYG00000017318	dazap1	52	44.809	Pundamilia_nyererei
ENSCSAVG00000001118	-	99	35.714	ENSPNAG00000011639	dazap1	54	45.355	Pygocentrus_nattereri
ENSCSAVG00000001118	-	57	42.667	ENSRBIG00000032485	DAZAP1	51	45.405	Rhinopithecus_bieti
ENSCSAVG00000001118	-	78	37.459	ENSSMAG00000021047	dazap1	52	42.703	Scophthalmus_maximus
ENSCSAVG00000001118	-	62	39.837	ENSSPUG00000006680	DAZAP1	50	44.385	Sphenodon_punctatus
ENSCSAVG00000001118	-	78	37.785	ENSSPAG00000002402	dazap1	52	44.809	Stegastes_partitus
ENSCSAVG00000001118	-	57	42.795	ENSSSCG00000022528	DAZAP1	51	45.503	Sus_scrofa
ENSCSAVG00000001118	-	58	41.048	ENSUMAG00000005845	DAZAP1	55	45.405	Ursus_maritimus