EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001132 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3508 bases
Position: chrreftig_122:26113-29620
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001938	RRM_1	PF00076.22	1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001972	-	1481	-	ENSCSAVP00000001938	261 (aa)	-	H2Y9E0

Gene Model

Click here to download ENSCSAVG00000001132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001132's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001132	-	76	56.098	ENSG00000132819	RBM38	86	79.245	Homo_sapiens
ENSCSAVG00000001132	-	58	60.127	ENSAPOG00000003301	rbm38	61	60.127	Acanthochromis_polyacanthus
ENSCSAVG00000001132	-	58	59.615	ENSACIG00000000010	rbm38	60	59.615	Amphilophus_citrinellus
ENSCSAVG00000001132	-	57	62.338	ENSACIG00000012502	-	96	75.439	Amphilophus_citrinellus
ENSCSAVG00000001132	-	58	60.127	ENSAOCG00000013497	-	74	48.182	Amphiprion_ocellaris
ENSCSAVG00000001132	-	58	60.127	ENSAPEG00000013137	rbm38	66	60.127	Amphiprion_percula
ENSCSAVG00000001132	-	57	62.987	ENSATEG00000016710	-	61	63.057	Anabas_testudineus
ENSCSAVG00000001132	-	83	51.364	ENSATEG00000016366	rbm38	67	62.658	Anabas_testudineus
ENSCSAVG00000001132	-	61	62.195	ENSACAG00000016238	RBM38	62	63.226	Anolis_carolinensis
ENSCSAVG00000001132	-	76	56.585	ENSANAG00000031959	RBM38	80	84.536	Aotus_nancymaae
ENSCSAVG00000001132	-	57	62.987	ENSACLG00000019514	-	61	63.057	Astatotilapia_calliptera
ENSCSAVG00000001132	-	62	62.805	ENSAMXG00000015601	-	63	63.871	Astyanax_mexicanus
ENSCSAVG00000001132	-	57	62.500	ENSAMXG00000038120	rbm38	64	61.935	Astyanax_mexicanus
ENSCSAVG00000001132	-	76	56.585	ENSBTAG00000008105	RBM38	64	63.291	Bos_taurus
ENSCSAVG00000001132	-	76	57.073	ENSCJAG00000019139	RBM38	80	84.536	Callithrix_jacchus
ENSCSAVG00000001132	-	59	62.658	ENSCHIG00000002609	RBM38	64	62.658	Capra_hircus
ENSCSAVG00000001132	-	76	57.073	ENSCCAG00000036872	RBM38	80	84.536	Cebus_capucinus
ENSCSAVG00000001132	-	76	56.098	ENSCATG00000032133	RBM38	80	84.536	Cercocebus_atys
ENSCSAVG00000001132	-	76	56.098	ENSCSAG00000015503	RBM38	64	62.658	Chlorocebus_sabaeus
ENSCSAVG00000001132	-	63	62.130	ENSCPBG00000024059	RBM38	72	63.125	Chrysemys_picta_bellii
ENSCSAVG00000001132	-	74	81.218	ENSCING00000025102	-	71	90.244	Ciona_intestinalis
ENSCSAVG00000001132	-	51	70.588	ENSCSEG00000004701	-	66	65.385	Cynoglossus_semilaevis
ENSCSAVG00000001132	-	67	59.444	ENSCVAG00000005472	-	61	63.057	Cyprinodon_variegatus
ENSCSAVG00000001132	-	58	60.510	ENSCVAG00000015952	rbm38	60	60.510	Cyprinodon_variegatus
ENSCSAVG00000001132	-	62	61.818	ENSDARG00000058818	rbm38	64	63.462	Danio_rerio
ENSCSAVG00000001132	-	50	59.756	ENSDNOG00000032004	RBM38	78	59.756	Dasypus_novemcinctus
ENSCSAVG00000001132	-	79	55.189	ENSECAG00000007700	RBM38	69	59.146	Equus_caballus
ENSCSAVG00000001132	-	59	62.025	ENSEEUG00000013489	RBM38	74	56.497	Erinaceus_europaeus
ENSCSAVG00000001132	-	58	60.390	ENSELUG00000000585	-	66	60.390	Esox_lucius
ENSCSAVG00000001132	-	59	62.658	ENSFCAG00000042916	RBM38	80	84.536	Felis_catus
ENSCSAVG00000001132	-	59	62.420	ENSFALG00000010805	RBM38	79	62.420	Ficedula_albicollis
ENSCSAVG00000001132	-	58	62.581	ENSFHEG00000017748	rbm38	61	62.581	Fundulus_heteroclitus
ENSCSAVG00000001132	-	76	56.585	ENSFHEG00000006160	-	67	63.694	Fundulus_heteroclitus
ENSCSAVG00000001132	-	63	62.130	ENSGALG00000026081	RBM38	72	63.125	Gallus_gallus
ENSCSAVG00000001132	-	56	63.158	ENSGACG00000009873	-	69	63.057	Gasterosteus_aculeatus
ENSCSAVG00000001132	-	58	61.039	ENSGACG00000015224	rbm38	72	61.039	Gasterosteus_aculeatus
ENSCSAVG00000001132	-	63	62.130	ENSGAGG00000001187	RBM38	72	63.125	Gopherus_agassizii
ENSCSAVG00000001132	-	57	62.987	ENSHBUG00000011778	-	65	63.057	Haplochromis_burtoni
ENSCSAVG00000001132	-	73	51.220	ENSHBUG00000012058	rbm38	64	58.861	Haplochromis_burtoni
ENSCSAVG00000001132	-	50	60.736	ENSHGLG00000015077	RBM38	68	60.736	Heterocephalus_glaber_female
ENSCSAVG00000001132	-	58	63.462	ENSIPUG00000019349	-	63	63.462	Ictalurus_punctatus
ENSCSAVG00000001132	-	58	59.509	ENSLBEG00000018878	rbm38	61	59.509	Labrus_bergylta
ENSCSAVG00000001132	-	77	55.610	ENSLOCG00000003456	rbm38	65	63.636	Lepisosteus_oculatus
ENSCSAVG00000001132	-	76	56.098	ENSMFAG00000043808	RBM38	80	84.536	Macaca_fascicularis
ENSCSAVG00000001132	-	76	56.098	ENSMMUG00000031391	RBM38	80	84.536	Macaca_mulatta
ENSCSAVG00000001132	-	76	56.098	ENSMNEG00000034683	RBM38	80	84.536	Macaca_nemestrina
ENSCSAVG00000001132	-	58	61.935	ENSMAMG00000024135	rbm38	61	61.935	Mastacembelus_armatus
ENSCSAVG00000001132	-	57	62.987	ENSMAMG00000020499	RBM38	62	63.057	Mastacembelus_armatus
ENSCSAVG00000001132	-	57	62.987	ENSMZEG00005000849	-	65	63.057	Maylandia_zebra
ENSCSAVG00000001132	-	58	58.861	ENSMZEG00005026036	rbm38	61	58.861	Maylandia_zebra
ENSCSAVG00000001132	-	76	56.098	ENSMICG00000038011	RBM38	76	59.756	Microcebus_murinus
ENSCSAVG00000001132	-	57	62.338	ENSMMOG00000020051	-	67	62.420	Mola_mola
ENSCSAVG00000001132	-	63	62.722	ENSMODG00000016458	RBM38	66	63.750	Monodelphis_domestica
ENSCSAVG00000001132	-	59	58.861	ENSMALG00000022327	rbm38	67	58.861	Monopterus_albus
ENSCSAVG00000001132	-	58	63.057	ENSMALG00000004680	RBM38	57	63.057	Monopterus_albus
ENSCSAVG00000001132	-	59	62.658	ENSMPUG00000006518	RBM38	52	79.245	Mustela_putorius_furo
ENSCSAVG00000001132	-	59	61.392	ENSMLUG00000011140	RBM38	70	61.392	Myotis_lucifugus
ENSCSAVG00000001132	-	58	59.494	ENSNBRG00000022685	rbm38	63	59.494	Neolamprologus_brichardi
ENSCSAVG00000001132	-	57	62.987	ENSNBRG00000022545	-	61	63.057	Neolamprologus_brichardi
ENSCSAVG00000001132	-	57	62.987	ENSONIG00000020324	-	62	63.057	Oreochromis_niloticus
ENSCSAVG00000001132	-	58	59.494	ENSONIG00000017073	rbm38	62	59.494	Oreochromis_niloticus
ENSCSAVG00000001132	-	63	61.538	ENSOANG00000009259	RBM38	58	63.871	Ornithorhynchus_anatinus
ENSCSAVG00000001132	-	58	60.127	ENSORLG00000012154	rbm38	61	59.494	Oryzias_latipes
ENSCSAVG00000001132	-	98	44.528	ENSORLG00020017871	rbm38	61	61.392	Oryzias_latipes_hni
ENSCSAVG00000001132	-	98	44.151	ENSORLG00015012606	rbm38	65	59.873	Oryzias_latipes_hsok
ENSCSAVG00000001132	-	98	43.774	ENSOMEG00000006805	rbm38	61	60.127	Oryzias_melastigma
ENSCSAVG00000001132	-	59	62.658	ENSPPRG00000009507	RBM38	80	84.536	Panthera_pardus
ENSCSAVG00000001132	-	59	62.658	ENSPTRG00000013661	RBM38	80	84.536	Pan_troglodytes
ENSCSAVG00000001132	-	76	56.098	ENSPANG00000020919	-	80	84.536	Papio_anubis
ENSCSAVG00000001132	-	61	56.886	ENSPKIG00000025417	rbm38	64	58.228	Paramormyrops_kingsleyae
ENSCSAVG00000001132	-	63	61.538	ENSPSIG00000011649	RBM38	66	62.500	Pelodiscus_sinensis
ENSCSAVG00000001132	-	63	62.130	ENSPCIG00000013648	RBM38	66	62.500	Phascolarctos_cinereus
ENSCSAVG00000001132	-	72	56.410	ENSPLAG00000002500	-	61	62.658	Poecilia_latipinna
ENSCSAVG00000001132	-	59	62.658	ENSPCOG00000026201	RBM38	80	84.536	Propithecus_coquereli
ENSCSAVG00000001132	-	57	62.987	ENSPNYG00000019727	-	96	75.439	Pundamilia_nyererei
ENSCSAVG00000001132	-	58	56.962	ENSPNYG00000021373	rbm38	64	58.228	Pundamilia_nyererei
ENSCSAVG00000001132	-	56	62.838	ENSPNAG00000015123	-	75	81.443	Pygocentrus_nattereri
ENSCSAVG00000001132	-	58	64.286	ENSPNAG00000010596	rbm38	63	64.286	Pygocentrus_nattereri
ENSCSAVG00000001132	-	76	57.073	ENSSBOG00000031053	RBM38	91	84.536	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001132	-	58	63.057	ENSSDUG00000021082	RBM38	61	63.057	Seriola_dumerili
ENSCSAVG00000001132	-	58	62.581	ENSSDUG00000022611	rbm38	61	62.581	Seriola_dumerili
ENSCSAVG00000001132	-	67	58.889	ENSSLDG00000011778	RBM38	61	63.057	Seriola_lalandi_dorsalis
ENSCSAVG00000001132	-	58	62.581	ENSSLDG00000010845	rbm38	66	62.581	Seriola_lalandi_dorsalis
ENSCSAVG00000001132	-	58	60.127	ENSSPAG00000011113	rbm38	61	60.127	Stegastes_partitus
ENSCSAVG00000001132	-	76	50.909	ENSTNIG00000007093	-	68	62.420	Tetraodon_nigroviridis
ENSCSAVG00000001132	-	59	61.783	ENSXETG00000011268	rbm38	69	61.250	Xenopus_tropicalis
ENSCSAVG00000001132	-	58	60.127	ENSXMAG00000023662	rbm38	61	60.127	Xiphophorus_maculatus