EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000001136 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 6598 bases
Position: chrreftig_107:578-7175
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001942	tRNA-synt_2	PF00152.20	9e-71	1	1
ENSCSAVP00000001943	tRNA-synt_2	PF00152.20	5e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000001977	-	1112	-	ENSCSAVP00000001943	261 (aa)	-	H2Y9E5
ENSCSAVT00000001976	-	1249	-	ENSCSAVP00000001942	311 (aa)	-	H2Y9E4

Gene Model

Click here to download ENSCSAVG00000001136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000001136	-	98	99.609	ENSCSAVG00000007684	-	56	91.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001136	-	98	74.609	ENSG00000065427	KARS	53	70.846	Homo_sapiens
ENSCSAVG00000001136	-	100	72.414	ENSAPOG00000010997	kars	56	72.188	Acanthochromis_polyacanthus
ENSCSAVG00000001136	-	98	72.549	ENSAMEG00000005347	KARS	51	69.279	Ailuropoda_melanoleuca
ENSCSAVG00000001136	-	99	64.688	ENSACIG00000000304	kars	54	64.688	Amphilophus_citrinellus
ENSCSAVG00000001136	-	100	73.946	ENSAOCG00000012971	kars	53	73.125	Amphiprion_ocellaris
ENSCSAVG00000001136	-	100	73.180	ENSAPEG00000011144	kars	55	72.188	Amphiprion_percula
ENSCSAVG00000001136	-	100	72.797	ENSATEG00000004954	kars	55	71.924	Anabas_testudineus
ENSCSAVG00000001136	-	92	67.893	ENSAPLG00000012705	KARS	54	67.893	Anas_platyrhynchos
ENSCSAVG00000001136	-	99	68.652	ENSACAG00000007577	KARS	50	68.652	Anolis_carolinensis
ENSCSAVG00000001136	-	98	63.922	ENSANAG00000031739	-	57	59.756	Aotus_nancymaae
ENSCSAVG00000001136	-	96	75.200	ENSANAG00000030403	-	53	70.533	Aotus_nancymaae
ENSCSAVG00000001136	-	100	72.797	ENSACLG00000001613	kars	54	71.787	Astatotilapia_calliptera
ENSCSAVG00000001136	-	96	75.600	ENSAMXG00000030719	kars	55	72.327	Astyanax_mexicanus
ENSCSAVG00000001136	-	100	65.549	WBGene00002238	kars-1	63	65.549	Caenorhabditis_elegans
ENSCSAVG00000001136	-	99	74.131	ENSCJAG00000014213	KARS	54	70.533	Callithrix_jacchus
ENSCSAVG00000001136	-	100	73.180	ENSCAFG00000020069	KARS	51	69.906	Canis_familiaris
ENSCSAVG00000001136	-	100	73.180	ENSCAFG00020001721	KARS	53	69.906	Canis_lupus_dingo
ENSCSAVG00000001136	-	98	72.656	ENSCHIG00000014108	-	54	69.906	Capra_hircus
ENSCSAVG00000001136	-	98	70.312	ENSCHIG00000016073	-	53	68.553	Capra_hircus
ENSCSAVG00000001136	-	98	73.828	ENSTSYG00000001643	KARS	55	71.160	Carlito_syrichta
ENSCSAVG00000001136	-	99	73.745	ENSCAPG00000016234	KARS	51	62.382	Cavia_aperea
ENSCSAVG00000001136	-	99	73.745	ENSCPOG00000012036	KARS	54	70.533	Cavia_porcellus
ENSCSAVG00000001136	-	98	74.510	ENSCCAG00000034307	-	53	70.846	Cebus_capucinus
ENSCSAVG00000001136	-	90	55.631	ENSCCAG00000030337	-	56	55.631	Cebus_capucinus
ENSCSAVG00000001136	-	98	72.656	ENSCATG00000038129	KARS	54	68.966	Cercocebus_atys
ENSCSAVG00000001136	-	98	73.828	ENSCLAG00000007905	KARS	54	70.846	Chinchilla_lanigera
ENSCSAVG00000001136	-	98	72.266	ENSCSAG00000003664	KARS	51	68.966	Chlorocebus_sabaeus
ENSCSAVG00000001136	-	98	73.438	ENSCHOG00000013447	KARS	51	70.219	Choloepus_hoffmanni
ENSCSAVG00000001136	-	97	69.279	ENSCPBG00000002553	-	57	69.279	Chrysemys_picta_bellii
ENSCSAVG00000001136	-	100	72.797	ENSCPBG00000026969	KARS	54	70.846	Chrysemys_picta_bellii
ENSCSAVG00000001136	-	100	91.188	ENSCING00000009513	-	56	86.997	Ciona_intestinalis
ENSCSAVG00000001136	-	98	66.406	ENSCANG00000032813	KARS	53	65.094	Colobus_angolensis_palliatus
ENSCSAVG00000001136	-	99	74.517	ENSCGRG00001004055	KARS	53	70.846	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001136	-	99	74.517	ENSCGRG00000014242	KARS	53	70.846	Cricetulus_griseus_crigri
ENSCSAVG00000001136	-	98	73.930	ENSCSEG00000008324	kars	55	71.739	Cynoglossus_semilaevis
ENSCSAVG00000001136	-	100	73.563	ENSCVAG00000019686	kars	55	72.188	Cyprinodon_variegatus
ENSCSAVG00000001136	-	100	72.797	ENSDARG00000103799	kars	62	71.160	Danio_rerio
ENSCSAVG00000001136	-	98	74.219	ENSDNOG00000002241	KARS	51	71.160	Dasypus_novemcinctus
ENSCSAVG00000001136	-	95	54.194	ENSDORG00000024214	-	53	54.194	Dipodomys_ordii
ENSCSAVG00000001136	-	96	74.400	ENSDORG00000004780	-	54	70.219	Dipodomys_ordii
ENSCSAVG00000001136	-	100	70.881	FBgn0027084	LysRS	55	70.755	Drosophila_melanogaster
ENSCSAVG00000001136	-	98	73.047	ENSETEG00000008353	KARS	51	69.906	Echinops_telfairi
ENSCSAVG00000001136	-	98	70.126	ENSEBUG00000001284	-	54	70.126	Eptatretus_burgeri
ENSCSAVG00000001136	-	100	72.414	ENSEASG00005013497	KARS	54	69.659	Equus_asinus_asinus
ENSCSAVG00000001136	-	100	72.414	ENSECAG00000013424	KARS	54	69.659	Equus_caballus
ENSCSAVG00000001136	-	99	60.502	ENSEEUG00000007042	KARS	51	60.502	Erinaceus_europaeus
ENSCSAVG00000001136	-	100	67.433	ENSELUG00000014575	kars	53	59.434	Esox_lucius
ENSCSAVG00000001136	-	98	73.333	ENSFCAG00000008573	KARS	53	69.279	Felis_catus
ENSCSAVG00000001136	-	99	70.497	ENSFALG00000002543	KARS	55	70.497	Ficedula_albicollis
ENSCSAVG00000001136	-	96	76.000	ENSFDAG00000007155	KARS	54	71.160	Fukomys_damarensis
ENSCSAVG00000001136	-	100	73.563	ENSFHEG00000006172	kars	55	73.354	Fundulus_heteroclitus
ENSCSAVG00000001136	-	100	73.946	ENSGMOG00000002633	kars	52	71.963	Gadus_morhua
ENSCSAVG00000001136	-	99	70.769	ENSGALG00000000907	KARS	56	69.906	Gallus_gallus
ENSCSAVG00000001136	-	100	73.946	ENSGAFG00000017252	kars	55	73.125	Gambusia_affinis
ENSCSAVG00000001136	-	99	70.497	ENSGACG00000015749	kars	54	70.497	Gasterosteus_aculeatus
ENSCSAVG00000001136	-	97	69.524	ENSGAGG00000011960	-	59	69.524	Gopherus_agassizii
ENSCSAVG00000001136	-	100	71.648	ENSGAGG00000023836	KARS	54	69.906	Gopherus_agassizii
ENSCSAVG00000001136	-	98	74.609	ENSGGOG00000005515	KARS	53	70.846	Gorilla_gorilla
ENSCSAVG00000001136	-	100	72.797	ENSHBUG00000013619	kars	54	71.787	Haplochromis_burtoni
ENSCSAVG00000001136	-	98	68.359	ENSHGLG00000015235	-	55	64.263	Heterocephalus_glaber_female
ENSCSAVG00000001136	-	96	65.234	ENSHGLG00000001298	-	57	61.231	Heterocephalus_glaber_female
ENSCSAVG00000001136	-	98	73.438	ENSHGLG00000011898	KARS	55	70.219	Heterocephalus_glaber_female
ENSCSAVG00000001136	-	98	73.438	ENSHGLG00100012264	KARS	54	70.219	Heterocephalus_glaber_male
ENSCSAVG00000001136	-	98	68.359	ENSHGLG00100012523	-	60	64.263	Heterocephalus_glaber_male
ENSCSAVG00000001136	-	96	65.234	ENSHGLG00100006466	-	57	61.231	Heterocephalus_glaber_male
ENSCSAVG00000001136	-	100	73.180	ENSHCOG00000002900	kars	53	71.875	Hippocampus_comes
ENSCSAVG00000001136	-	100	70.881	ENSIPUG00000009862	kars	56	71.895	Ictalurus_punctatus
ENSCSAVG00000001136	-	96	75.200	ENSSTOG00000004205	KARS	54	70.533	Ictidomys_tridecemlineatus
ENSCSAVG00000001136	-	96	75.600	ENSJJAG00000020406	Kars	54	70.533	Jaculus_jaculus
ENSCSAVG00000001136	-	98	72.727	ENSKMAG00000006434	kars	55	72.727	Kryptolebias_marmoratus
ENSCSAVG00000001136	-	100	73.563	ENSLBEG00000026537	kars	53	71.875	Labrus_bergylta
ENSCSAVG00000001136	-	99	73.462	ENSLACG00000006667	KARS	52	70.898	Latimeria_chalumnae
ENSCSAVG00000001136	-	99	69.565	ENSLACG00000016399	-	63	69.565	Latimeria_chalumnae
ENSCSAVG00000001136	-	98	68.038	ENSLOCG00000013608	-	57	68.038	Lepisosteus_oculatus
ENSCSAVG00000001136	-	96	75.600	ENSLOCG00000004002	kars	55	72.013	Lepisosteus_oculatus
ENSCSAVG00000001136	-	99	73.256	ENSLAFG00000015340	KARS	51	69.592	Loxodonta_africana
ENSCSAVG00000001136	-	98	72.656	ENSMFAG00000040024	KARS	53	68.966	Macaca_fascicularis
ENSCSAVG00000001136	-	98	72.656	ENSMNEG00000042879	-	53	68.966	Macaca_nemestrina
ENSCSAVG00000001136	-	98	72.656	ENSMLEG00000034947	KARS	53	68.966	Mandrillus_leucophaeus
ENSCSAVG00000001136	-	100	72.414	ENSMAMG00000021559	kars	53	71.118	Mastacembelus_armatus
ENSCSAVG00000001136	-	100	72.797	ENSMZEG00005014382	kars	54	71.787	Maylandia_zebra
ENSCSAVG00000001136	-	99	66.154	ENSMGAG00000009000	KARS	54	68.954	Meleagris_gallopavo
ENSCSAVG00000001136	-	100	73.282	ENSMICG00000011997	KARS	54	70.533	Microcebus_murinus
ENSCSAVG00000001136	-	99	74.517	ENSMOCG00000011829	Kars	54	70.846	Microtus_ochrogaster
ENSCSAVG00000001136	-	96	71.600	ENSMOCG00000019029	-	53	67.712	Microtus_ochrogaster
ENSCSAVG00000001136	-	100	73.563	ENSMMOG00000016934	kars	57	72.100	Mola_mola
ENSCSAVG00000001136	-	96	72.000	ENSMODG00000002238	-	52	68.339	Monodelphis_domestica
ENSCSAVG00000001136	-	96	74.000	ENSMODG00000002215	-	55	69.592	Monodelphis_domestica
ENSCSAVG00000001136	-	100	73.180	ENSMALG00000020858	kars	55	71.787	Monopterus_albus
ENSCSAVG00000001136	-	100	74.046	MGP_CAROLIEiJ_G0031588	Kars	66	70.846	Mus_caroli
ENSCSAVG00000001136	-	100	74.046	ENSMUSG00000031948	Kars	54	70.846	Mus_musculus
ENSCSAVG00000001136	-	99	74.231	MGP_PahariEiJ_G0023186	Kars	54	70.533	Mus_pahari
ENSCSAVG00000001136	-	100	74.046	MGP_SPRETEiJ_G0032706	Kars	54	70.846	Mus_spretus
ENSCSAVG00000001136	-	99	73.846	ENSMPUG00000009871	KARS	51	70.533	Mustela_putorius_furo
ENSCSAVG00000001136	-	99	72.481	ENSMLUG00000015119	-	54	69.906	Myotis_lucifugus
ENSCSAVG00000001136	-	99	45.603	ENSMLUG00000026871	-	62	45.603	Myotis_lucifugus
ENSCSAVG00000001136	-	96	74.800	ENSNGAG00000018820	-	54	70.219	Nannospalax_galili
ENSCSAVG00000001136	-	91	72.574	ENSNGAG00000022944	-	52	68.301	Nannospalax_galili
ENSCSAVG00000001136	-	100	72.797	ENSNBRG00000011098	kars	54	71.787	Neolamprologus_brichardi
ENSCSAVG00000001136	-	98	74.219	ENSNLEG00000013072	KARS	55	69.350	Nomascus_leucogenys
ENSCSAVG00000001136	-	98	70.703	ENSMEUG00000008684	KARS	52	67.398	Notamacropus_eugenii
ENSCSAVG00000001136	-	100	71.756	ENSOPRG00000012544	KARS	52	69.592	Ochotona_princeps
ENSCSAVG00000001136	-	96	74.400	ENSODEG00000013099	-	55	70.533	Octodon_degus
ENSCSAVG00000001136	-	96	59.600	ENSODEG00000009464	-	59	58.863	Octodon_degus
ENSCSAVG00000001136	-	100	73.180	ENSONIG00000005937	kars	55	71.698	Oreochromis_niloticus
ENSCSAVG00000001136	-	99	71.538	ENSOANG00000008179	KARS	54	69.592	Ornithorhynchus_anatinus
ENSCSAVG00000001136	-	96	75.600	ENSORLG00000007627	kars	52	72.727	Oryzias_latipes
ENSCSAVG00000001136	-	96	75.200	ENSORLG00020010056	kars	52	72.414	Oryzias_latipes_hni
ENSCSAVG00000001136	-	96	75.600	ENSORLG00015008179	kars	52	72.727	Oryzias_latipes_hsok
ENSCSAVG00000001136	-	96	76.000	ENSOMEG00000001710	kars	55	73.041	Oryzias_melastigma
ENSCSAVG00000001136	-	100	73.664	ENSOGAG00000005903	KARS	51	71.384	Otolemur_garnettii
ENSCSAVG00000001136	-	89	66.667	ENSOARG00000006928	KARS	51	66.667	Ovis_aries
ENSCSAVG00000001136	-	98	74.609	ENSPPAG00000036192	KARS	53	71.160	Pan_paniscus
ENSCSAVG00000001136	-	98	72.941	ENSPPRG00000003027	KARS	53	68.966	Panthera_pardus
ENSCSAVG00000001136	-	98	73.333	ENSPTIG00000008011	KARS	53	69.279	Panthera_tigris_altaica
ENSCSAVG00000001136	-	98	74.609	ENSPTRG00000008364	KARS	53	71.160	Pan_troglodytes
ENSCSAVG00000001136	-	98	72.656	ENSPANG00000024106	KARS	51	68.966	Papio_anubis
ENSCSAVG00000001136	-	100	72.797	ENSPKIG00000009896	kars	55	72.013	Paramormyrops_kingsleyae
ENSCSAVG00000001136	-	96	74.000	ENSPSIG00000009294	KARS	55	69.279	Pelodiscus_sinensis
ENSCSAVG00000001136	-	98	70.253	ENSPSIG00000003041	-	58	70.253	Pelodiscus_sinensis
ENSCSAVG00000001136	-	100	73.563	ENSPMGG00000006117	kars	57	72.671	Periophthalmus_magnuspinnatus
ENSCSAVG00000001136	-	100	73.664	ENSPEMG00000012277	Kars	54	70.533	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001136	-	99	68.966	ENSPMAG00000008360	-	51	68.966	Petromyzon_marinus
ENSCSAVG00000001136	-	96	74.000	ENSPCIG00000010761	-	54	69.279	Phascolarctos_cinereus
ENSCSAVG00000001136	-	99	71.103	ENSPCIG00000025469	-	52	67.712	Phascolarctos_cinereus
ENSCSAVG00000001136	-	100	73.563	ENSPFOG00000013253	kars	52	73.041	Poecilia_formosa
ENSCSAVG00000001136	-	100	73.563	ENSPLAG00000004189	kars	55	72.500	Poecilia_latipinna
ENSCSAVG00000001136	-	100	73.563	ENSPMEG00000015698	kars	55	72.812	Poecilia_mexicana
ENSCSAVG00000001136	-	100	72.797	ENSPREG00000023179	kars	55	72.188	Poecilia_reticulata
ENSCSAVG00000001136	-	98	74.219	ENSPPYG00000007567	KARS	51	70.219	Pongo_abelii
ENSCSAVG00000001136	-	98	73.438	ENSPCAG00000010790	KARS	52	69.597	Procavia_capensis
ENSCSAVG00000001136	-	100	72.901	ENSPCOG00000003166	KARS	59	70.846	Propithecus_coquereli
ENSCSAVG00000001136	-	98	73.828	ENSPVAG00000006746	KARS	51	70.219	Pteropus_vampyrus
ENSCSAVG00000001136	-	100	72.797	ENSPNYG00000013095	kars	54	71.787	Pundamilia_nyererei
ENSCSAVG00000001136	-	96	76.400	ENSPNAG00000013828	kars	55	72.956	Pygocentrus_nattereri
ENSCSAVG00000001136	-	100	72.519	ENSRNOG00000019456	Kars	51	69.279	Rattus_norvegicus
ENSCSAVG00000001136	-	98	72.656	ENSRBIG00000030118	KARS	54	69.279	Rhinopithecus_bieti
ENSCSAVG00000001136	-	98	72.656	ENSRROG00000041418	KARS	54	69.279	Rhinopithecus_roxellana
ENSCSAVG00000001136	-	98	64.353	YDR037W	KRS1	54	64.353	Saccharomyces_cerevisiae
ENSCSAVG00000001136	-	95	36.000	YNL073W	-	56	36.308	Saccharomyces_cerevisiae
ENSCSAVG00000001136	-	99	73.359	ENSSBOG00000019255	KARS	55	69.906	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001136	-	98	72.266	ENSSHAG00000002050	-	53	69.592	Sarcophilus_harrisii
ENSCSAVG00000001136	-	96	66.000	ENSSHAG00000009005	-	57	62.696	Sarcophilus_harrisii
ENSCSAVG00000001136	-	96	74.800	ENSSHAG00000001359	-	56	70.846	Sarcophilus_harrisii
ENSCSAVG00000001136	-	100	71.648	ENSSFOG00015014837	kars	57	70.846	Scleropages_formosus
ENSCSAVG00000001136	-	100	72.414	ENSSMAG00000021441	kars	55	72.100	Scophthalmus_maximus
ENSCSAVG00000001136	-	100	73.180	ENSSDUG00000001202	kars	55	72.100	Seriola_dumerili
ENSCSAVG00000001136	-	100	73.180	ENSSLDG00000021220	kars	55	72.100	Seriola_lalandi_dorsalis
ENSCSAVG00000001136	-	95	74.297	ENSSPUG00000004974	KARS	53	70.126	Sphenodon_punctatus
ENSCSAVG00000001136	-	100	73.180	ENSSPAG00000020365	kars	55	72.500	Stegastes_partitus
ENSCSAVG00000001136	-	96	74.800	ENSSSCG00000002704	KARS	53	70.440	Sus_scrofa
ENSCSAVG00000001136	-	99	70.846	ENSTGUG00000008400	KARS	57	70.846	Taeniopygia_guttata
ENSCSAVG00000001136	-	100	71.648	ENSTRUG00000017551	kars	54	71.739	Takifugu_rubripes
ENSCSAVG00000001136	-	99	72.188	ENSTNIG00000009351	kars	56	72.188	Tetraodon_nigroviridis
ENSCSAVG00000001136	-	98	71.875	ENSTTRG00000001221	KARS	51	68.652	Tursiops_truncatus
ENSCSAVG00000001136	-	98	73.333	ENSUAMG00000017557	KARS	53	69.906	Ursus_americanus
ENSCSAVG00000001136	-	98	73.333	ENSUMAG00000014559	KARS	51	69.906	Ursus_maritimus
ENSCSAVG00000001136	-	96	70.800	ENSVPAG00000003716	KARS	51	67.085	Vicugna_pacos
ENSCSAVG00000001136	-	100	72.797	ENSVVUG00000024338	KARS	57	69.592	Vulpes_vulpes
ENSCSAVG00000001136	-	100	72.031	ENSXETG00000003569	kars	55	67.192	Xenopus_tropicalis
ENSCSAVG00000001136	-	100	73.180	ENSXCOG00000011313	kars	57	72.812	Xiphophorus_couchianus
ENSCSAVG00000001136	-	100	73.180	ENSXMAG00000003191	kars	55	72.812	Xiphophorus_maculatus